FFCP PHASE1:Mm9::chr6:48824832..48824841,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:48824832..48824841,+|id=chr6:48824832..48824841,+|ontology_enrichment_celltype=CL:0000239!6.28e-08!6;CL:0000677!6.28e-08!6;CL:0000212!6.28e-08!6;CL:0000584!6.28e-08!6;CL:0002563!6.42e-07!9;CL:0002251!6.42e-07!9|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.43e-21!43;UBERON:0005409!2.36e-16!59;UBERON:0000344!1.11e-15!15;UBERON:0001242!1.37e-12!13;UBERON:0000060!1.37e-12!13;UBERON:0001262!1.37e-12!13;UBERON:0004786!1.37e-12!13;UBERON:0004923!2.95e-10!24;UBERON:0003350!6.42e-07!9;UBERON:0004808!6.42e-07!9;UBERON:0001277!6.42e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.62e-41,31;UBERON:0005409,6.66e-26,47;UBERON:0000344,3.77e-15,15;UBERON:0004119,7.29e-12,118;UBERON:0000925,7.29e-12,118;UBERON:0006595,7.29e-12,118;UBERON:0004923,2.70e-11,24;UBERON:0001007,7.32e-11,116;UBERON:0001555,7.32e-11,116;UBERON:0007026,7.32e-11,116;UBERON:0001242,3.98e-10,13;UBERON:0001262,3.98e-10,13;UBERON:0004786,3.98e-10,13;UBERON:0004921,1.21e-08,114;UBERON:0002108,1.37e-08,4;UBERON:0001962,2.12e-08,2;UBERON:0001961,2.12e-08,2;UBERON:0001744,2.12e-08,2|phase1_expression=0,2.79180326111489,0.909998478779072,4.83942738090928,3.50627010962443,0,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,2.06468352960453,2.29692785646008,1.7230479846363,0.430942465371778,1.71021077510736,2.01624103807945,0.665191531965914,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,2.11560453330835,0,0,0,0.403367049246685,1.11189021922435,3.61428689613862,2.84717436926707,1.81168850196412,4.77536896720512,5.37182474511107,3.70431765526328,3.59527763461689,1.29682829924817,1.7922714592893,0,0,0,0.203651327845314,0.387904974335251,0.350679099451593,0.632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0591603543191,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.169229215783353,0,0,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0|short_description=p@chr6:48824832..48824841,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:48824832..48824841,+ | |||
|id=chr6:48824832..48824841,+ | |||
|ontology_enrichment_celltype=CL:0000239!6.28e-08!6;CL:0000677!6.28e-08!6;CL:0000212!6.28e-08!6;CL:0000584!6.28e-08!6;CL:0002563!6.42e-07!9;CL:0002251!6.42e-07!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.43e-21!43;UBERON:0005409!2.36e-16!59;UBERON:0000344!1.11e-15!15;UBERON:0001242!1.37e-12!13;UBERON:0000060!1.37e-12!13;UBERON:0001262!1.37e-12!13;UBERON:0004786!1.37e-12!13;UBERON:0004923!2.95e-10!24;UBERON:0003350!6.42e-07!9;UBERON:0004808!6.42e-07!9;UBERON:0001277!6.42e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.62e-41,31;UBERON:0005409,6.66e-26,47;UBERON:0000344,3.77e-15,15;UBERON:0004119,7.29e-12,118;UBERON:0000925,7.29e-12,118;UBERON:0006595,7.29e-12,118;UBERON:0004923,2.70e-11,24;UBERON:0001007,7.32e-11,116;UBERON:0001555,7.32e-11,116;UBERON:0007026,7.32e-11,116;UBERON:0001242,3.98e-10,13;UBERON:0001262,3.98e-10,13;UBERON:0004786,3.98e-10,13;UBERON:0004921,1.21e-08,114;UBERON:0002108,1.37e-08,4;UBERON:0001962,2.12e-08,2;UBERON:0001961,2.12e-08,2;UBERON:0001744,2.12e-08,2 | |||
|phase1_expression=0,2.79180326111489,0.909998478779072,4.83942738090928,3.50627010962443,0,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,2.06468352960453,2.29692785646008,1.7230479846363,0.430942465371778,1.71021077510736,2.01624103807945,0.665191531965914,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,2.11560453330835,0,0,0,0.403367049246685,1.11189021922435,3.61428689613862,2.84717436926707,1.81168850196412,4.77536896720512,5.37182474511107,3.70431765526328,3.59527763461689,1.29682829924817,1.7922714592893,0,0,0,0.203651327845314,0.387904974335251,0.350679099451593,0.632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0591603543191,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.169229215783353,0,0,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr6:48824832..48824841,+ | |||
}} |
Revision as of 10:11, 14 September 2013
Short description: | p@chr6:48824832..48824841, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:48824832..48824841, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 5.62e-41 | 31 |
gastrointestinal system | 6.66e-26 | 47 |
mucosa | 3.77e-15 | 15 |
endoderm-derived structure | 7.29e-12 | 118 |
endoderm | 7.29e-12 | 118 |
presumptive endoderm | 7.29e-12 | 118 |
organ component layer | 2.70e-11 | 24 |
digestive system | 7.32e-11 | 116 |
digestive tract | 7.32e-11 | 116 |
primitive gut | 7.32e-11 | 116 |
intestinal mucosa | 3.98e-10 | 13 |
wall of intestine | 3.98e-10 | 13 |
gastrointestinal system mucosa | 3.98e-10 | 13 |
subdivision of digestive tract | 1.21e-08 | 114 |
small intestine | 1.37e-08 | 4 |
gut-associated lymphoid tissue | 2.12e-08 | 2 |
mucosa-associated lymphoid tissue | 2.12e-08 | 2 |
lymphoid tissue | 2.12e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.