FFCP PHASE1:Mm9::chr12:114684617..114684621,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=284|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114684617..114684621,+|id=chr12:114684617..114684621,+|ontology_enrichment_celltype=CL:0000553!1.03e-08!6;CL:0000556!1.03e-08!6;CL:0002031!1.52e-08!25|ontology_enrichment_celltype_v019_2=CL:0000625,1.39e-22,1;CL:0000791,1.01e-10,9;CL:0000789,1.01e-10,9;CL:0002420,1.01e-10,9;CL:0002419,1.01e-10,9;CL:0000790,1.01e-10,9;CL:0000084,5.79e-09,11;CL:0000827,5.79e-09,11;CL:0002031,1.05e-08,25;CL:0000838,2.66e-08,12;CL:0000542,9.70e-08,13;CL:0000051,9.70e-08,13;CL:0000988,5.58e-07,32;CL:0002032,5.58e-07,32;CL:0000037,5.58e-07,32;CL:0000837,5.58e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.23e-26!48;UBERON:0004177!7.62e-26!29;UBERON:0002390!4.57e-25!45;UBERON:0003061!4.57e-25!45;UBERON:0002370!3.69e-19!23;UBERON:0000974!3.69e-19!23;UBERON:0004807!3.69e-19!23;UBERON:0005058!3.69e-19!23;UBERON:0003351!3.69e-19!23;UBERON:0009113!3.69e-19!23;UBERON:0003295!3.69e-19!23;UBERON:0009722!3.69e-19!23;UBERON:0005562!3.69e-19!23;UBERON:0007690!3.69e-19!23;UBERON:0006562!3.00e-18!24;UBERON:0003408!3.00e-18!24;UBERON:0001557!3.00e-18!24;UBERON:0001042!3.00e-18!24;UBERON:0008814!3.00e-18!24;UBERON:0009145!3.00e-18!24;UBERON:0002405!4.90e-18!70;UBERON:0000072!6.39e-16!27;UBERON:0005057!7.19e-15!51;UBERON:0000065!7.94e-15!41;UBERON:0001004!2.16e-14!42;UBERON:0003081!5.09e-12!88;UBERON:0000063!1.14e-11!35;UBERON:0001041!1.50e-09!92;UBERON:0000077!7.83e-09!97;UBERON:0005911!1.39e-08!69;UBERON:0002106!6.22e-08!6;UBERON:0004457!6.22e-08!6;UBERON:0000042!6.22e-08!6;UBERON:0004854!6.22e-08!6;UBERON:0009034!6.22e-08!6;UBERON:0002095!6.22e-08!6;UBERON:0004782!6.22e-08!6;UBERON:0003281!6.22e-08!6;UBERON:0009664!6.22e-08!6;UBERON:0002296!6.22e-08!6;UBERON:0005602!6.22e-08!6;UBERON:0001179!6.22e-08!6;UBERON:0006293!6.22e-08!6;UBERON:0003929!1.28e-07!55;UBERON:0002368!9.42e-07!60;UBERON:0000064!9.55e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.07e-23,1;UBERON:0001097,5.07e-23,1;UBERON:0003968,5.07e-23,1;UBERON:0001467,5.07e-23,1;UBERON:0002465,1.34e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0.563154888606667,0,0.171217968225505,0,5.13602189793617,0,0,0.607425802169478,0,0.946386496074713,1.09691546884591,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.512612642393558,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0.198681354781265,0.120195449519969,0.295379054349154,0.504832249740738,0.0762068066549998,0.201652370273681,0.487289403698762,0.865906574762965,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:114684617..114684621,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=284 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114684617..114684621,+ | |||
|id=chr12:114684617..114684621,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.03e-08!6;CL:0000556!1.03e-08!6;CL:0002031!1.52e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.39e-22,1;CL:0000791,1.01e-10,9;CL:0000789,1.01e-10,9;CL:0002420,1.01e-10,9;CL:0002419,1.01e-10,9;CL:0000790,1.01e-10,9;CL:0000084,5.79e-09,11;CL:0000827,5.79e-09,11;CL:0002031,1.05e-08,25;CL:0000838,2.66e-08,12;CL:0000542,9.70e-08,13;CL:0000051,9.70e-08,13;CL:0000988,5.58e-07,32;CL:0002032,5.58e-07,32;CL:0000037,5.58e-07,32;CL:0000837,5.58e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.23e-26!48;UBERON:0004177!7.62e-26!29;UBERON:0002390!4.57e-25!45;UBERON:0003061!4.57e-25!45;UBERON:0002370!3.69e-19!23;UBERON:0000974!3.69e-19!23;UBERON:0004807!3.69e-19!23;UBERON:0005058!3.69e-19!23;UBERON:0003351!3.69e-19!23;UBERON:0009113!3.69e-19!23;UBERON:0003295!3.69e-19!23;UBERON:0009722!3.69e-19!23;UBERON:0005562!3.69e-19!23;UBERON:0007690!3.69e-19!23;UBERON:0006562!3.00e-18!24;UBERON:0003408!3.00e-18!24;UBERON:0001557!3.00e-18!24;UBERON:0001042!3.00e-18!24;UBERON:0008814!3.00e-18!24;UBERON:0009145!3.00e-18!24;UBERON:0002405!4.90e-18!70;UBERON:0000072!6.39e-16!27;UBERON:0005057!7.19e-15!51;UBERON:0000065!7.94e-15!41;UBERON:0001004!2.16e-14!42;UBERON:0003081!5.09e-12!88;UBERON:0000063!1.14e-11!35;UBERON:0001041!1.50e-09!92;UBERON:0000077!7.83e-09!97;UBERON:0005911!1.39e-08!69;UBERON:0002106!6.22e-08!6;UBERON:0004457!6.22e-08!6;UBERON:0000042!6.22e-08!6;UBERON:0004854!6.22e-08!6;UBERON:0009034!6.22e-08!6;UBERON:0002095!6.22e-08!6;UBERON:0004782!6.22e-08!6;UBERON:0003281!6.22e-08!6;UBERON:0009664!6.22e-08!6;UBERON:0002296!6.22e-08!6;UBERON:0005602!6.22e-08!6;UBERON:0001179!6.22e-08!6;UBERON:0006293!6.22e-08!6;UBERON:0003929!1.28e-07!55;UBERON:0002368!9.42e-07!60;UBERON:0000064!9.55e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.07e-23,1;UBERON:0001097,5.07e-23,1;UBERON:0003968,5.07e-23,1;UBERON:0001467,5.07e-23,1;UBERON:0002465,1.34e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.563154888606667,0,0.171217968225505,0,5.13602189793617,0,0,0.607425802169478,0,0.946386496074713,1.09691546884591,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.512612642393558,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0.198681354781265,0.120195449519969,0.295379054349154,0.504832249740738,0.0762068066549998,0.201652370273681,0.487289403698762,0.865906574762965,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:114684617..114684621,+ | |||
}} |
Revision as of 22:27, 12 September 2013
Short description: | p@chr12:114684617..114684621, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114684617..114684621, + |
Coexpression cluster: | MCL_coexpression_mm9:284 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.39e-22 | 1 |
mature alpha-beta T cell | 1.01e-10 | 9 |
alpha-beta T cell | 1.01e-10 | 9 |
immature T cell | 1.01e-10 | 9 |
mature T cell | 1.01e-10 | 9 |
immature alpha-beta T cell | 1.01e-10 | 9 |
T cell | 5.79e-09 | 11 |
pro-T cell | 5.79e-09 | 11 |
hematopoietic lineage restricted progenitor cell | 1.05e-08 | 25 |
lymphoid lineage restricted progenitor cell | 2.66e-08 | 12 |
lymphocyte | 9.70e-08 | 13 |
common lymphoid progenitor | 9.70e-08 | 13 |
hematopoietic cell | 5.58e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.58e-07 | 32 |
hematopoietic stem cell | 5.58e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.58e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymph node | 5.07e-23 | 1 |
axillary lymph node | 5.07e-23 | 1 |
peripheral lymph node | 5.07e-23 | 1 |
shoulder | 5.07e-23 | 1 |
lymphoid system | 1.34e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.