FFCP PHASE1:Mm9::chr19:10917253..10917258,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=65221|HGNC=|MCL_coexpression_id=200|UniProt=|association_with_transcript=-126bp_to_ENSMUST00000138263_5end|description=CAGE_peak_4_at_Slc15a3_5end|id=chr19:10917253..10917258,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002092,3.63e-12,3;CL:0002540,3.63e-12,3;CL:0002194,6.58e-09,4;CL:0000766,6.58e-09,4;CL:0000234,6.58e-09,4;CL:0000576,6.58e-09,4;CL:0000235,6.58e-09,4;CL:0000864,6.58e-09,4;CL:0002009,6.58e-09,4;CL:0000040,6.58e-09,4;CL:0000559,6.58e-09,4;CL:0002476,1.77e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!5.04e-11!70;UBERON:0000926!1.02e-10!193;UBERON:0004120!1.02e-10!193;UBERON:0006603!1.02e-10!193;UBERON:0009569!1.18e-07!66;UBERON:0005057!1.74e-07!51;UBERON:0003104!3.48e-07!131;UBERON:0009142!3.48e-07!131;UBERON:0002193!3.52e-07!48;UBERON:0005172!8.37e-07!49;UBERON:0005173!8.37e-07!49;UBERON:0002417!8.37e-07!49;UBERON:0000916!8.37e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.88e-09,6;UBERON:0004457,4.88e-09,6;UBERON:0000042,4.88e-09,6;UBERON:0004854,4.88e-09,6;UBERON:0009034,4.88e-09,6;UBERON:0002095,4.88e-09,6;UBERON:0004782,4.88e-09,6;UBERON:0003281,4.88e-09,6;UBERON:0009664,4.88e-09,6;UBERON:0002296,4.88e-09,6;UBERON:0005602,4.88e-09,6;UBERON:0001179,4.88e-09,6;UBERON:0006293,4.88e-09,6;UBERON:0002371,5.96e-08,16;UBERON:0009569,2.49e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,2.09265815368454,0.7813353445238,0.523523743973798,3.52938892818609,3.41522742479223,1.94204141212461,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,13.0485459005803,11.8663963508037,17.7620028736525,0.898800331555214,2.68952813725088,0.103689612308478,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94932925234301,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0.29688427812965,0,0,0,0.60289056221049,0.705532242814229,0.502666365318702,0,0,0,0.323533699894818,0.662524555381181,0,0,0,0,0.510914110417183,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0.20778804455956,0,0.611036183101898,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.771335564436891,0,0,0.116765342367169,0.658239399653922,0.656669856316381,0.0810688095458557,0.146199987425332,0.878200461164203,0.536825675041487,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0.949058123089023,0,0.754005626400808,0,0.38992817423824,0,2.80979464837102,0.199141273254367,0.189667900953082,0.456994050438915,0,0,0.387904974335251,0,0.126473074248515,0,0.31399745568275,0.123397163921801,0.296452627087149,0,0.393117990226406,0.674586337154561,0.202860121388503,0,0,0.863088412352432,1.78348749452539,0.549122826376163,33.0666875012915,1.48856379067401,1.24815069245824,1.26289438973556,0.358794827043824,0.482443521363367,0.184753190166605,0,0,0,0,0,0.238043640886014,1.75620283072019,0.945810864637146,0.8858587585951,0.318909537314974,1.47476983244164,2.24490476425664,1.44649058581512,10.5553898757491,8.70249094109935,0.491764273019036,0.275936746304732,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0,0,0.582961673259701,0,0.683483523191411,1.03193433981611,2.22233432843654,1.13021074202815,0.546776910884101,2.0590035588587,0.169978429993855,0.279902904647316,0,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0.513554785824136,0.51968329191118,0.179026695667481,0.39736270956253,0.240390899039938,0.590758108698309,0.302899349844443,0.304827226619999,0.504130925684203,0.292373642219257,0.673482891482306,0.350630706544707,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0,0.25384382367503,0,0,0.679020569229309,0,0.237270036248348,0.29551344712669,0.818462086339379,0,0,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p4@Slc15a3}} | ||
|EntrezGene=65221 | |||
|HGNC= | |||
|MCL_coexpression_id=200 | |||
|UniProt= | |||
|association_with_transcript=-126bp_to_ENSMUST00000138263_5end | |||
|description=CAGE_peak_4_at_Slc15a3_5end | |||
|id=chr19:10917253..10917258,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,3.63e-12,3;CL:0002540,3.63e-12,3;CL:0002194,6.58e-09,4;CL:0000766,6.58e-09,4;CL:0000234,6.58e-09,4;CL:0000576,6.58e-09,4;CL:0000235,6.58e-09,4;CL:0000864,6.58e-09,4;CL:0002009,6.58e-09,4;CL:0000040,6.58e-09,4;CL:0000559,6.58e-09,4;CL:0002476,1.77e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.04e-11!70;UBERON:0000926!1.02e-10!193;UBERON:0004120!1.02e-10!193;UBERON:0006603!1.02e-10!193;UBERON:0009569!1.18e-07!66;UBERON:0005057!1.74e-07!51;UBERON:0003104!3.48e-07!131;UBERON:0009142!3.48e-07!131;UBERON:0002193!3.52e-07!48;UBERON:0005172!8.37e-07!49;UBERON:0005173!8.37e-07!49;UBERON:0002417!8.37e-07!49;UBERON:0000916!8.37e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.88e-09,6;UBERON:0004457,4.88e-09,6;UBERON:0000042,4.88e-09,6;UBERON:0004854,4.88e-09,6;UBERON:0009034,4.88e-09,6;UBERON:0002095,4.88e-09,6;UBERON:0004782,4.88e-09,6;UBERON:0003281,4.88e-09,6;UBERON:0009664,4.88e-09,6;UBERON:0002296,4.88e-09,6;UBERON:0005602,4.88e-09,6;UBERON:0001179,4.88e-09,6;UBERON:0006293,4.88e-09,6;UBERON:0002371,5.96e-08,16;UBERON:0009569,2.49e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,2.09265815368454,0.7813353445238,0.523523743973798,3.52938892818609,3.41522742479223,1.94204141212461,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,13.0485459005803,11.8663963508037,17.7620028736525,0.898800331555214,2.68952813725088,0.103689612308478,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94932925234301,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0.29688427812965,0,0,0,0.60289056221049,0.705532242814229,0.502666365318702,0,0,0,0.323533699894818,0.662524555381181,0,0,0,0,0.510914110417183,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0.20778804455956,0,0.611036183101898,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.771335564436891,0,0,0.116765342367169,0.658239399653922,0.656669856316381,0.0810688095458557,0.146199987425332,0.878200461164203,0.536825675041487,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0.949058123089023,0,0.754005626400808,0,0.38992817423824,0,2.80979464837102,0.199141273254367,0.189667900953082,0.456994050438915,0,0,0.387904974335251,0,0.126473074248515,0,0.31399745568275,0.123397163921801,0.296452627087149,0,0.393117990226406,0.674586337154561,0.202860121388503,0,0,0.863088412352432,1.78348749452539,0.549122826376163,33.0666875012915,1.48856379067401,1.24815069245824,1.26289438973556,0.358794827043824,0.482443521363367,0.184753190166605,0,0,0,0,0,0.238043640886014,1.75620283072019,0.945810864637146,0.8858587585951,0.318909537314974,1.47476983244164,2.24490476425664,1.44649058581512,10.5553898757491,8.70249094109935,0.491764273019036,0.275936746304732,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0,0,0.582961673259701,0,0.683483523191411,1.03193433981611,2.22233432843654,1.13021074202815,0.546776910884101,2.0590035588587,0.169978429993855,0.279902904647316,0,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0.513554785824136,0.51968329191118,0.179026695667481,0.39736270956253,0.240390899039938,0.590758108698309,0.302899349844443,0.304827226619999,0.504130925684203,0.292373642219257,0.673482891482306,0.350630706544707,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0,0.25384382367503,0,0,0.679020569229309,0,0.237270036248348,0.29551344712669,0.818462086339379,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p4@Slc15a3 | |||
}} |
Revision as of 17:01, 13 September 2013
Short description: | p4@Slc15a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc15a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | -126bp_to_ENSMUST00000138263_5end |
EntrezGene: | Slc15a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 3.63e-12 | 3 |
mesenchymal stem cell of the bone marrow | 3.63e-12 | 3 |
monopoietic cell | 6.58e-09 | 4 |
myeloid leukocyte | 6.58e-09 | 4 |
phagocyte | 6.58e-09 | 4 |
monocyte | 6.58e-09 | 4 |
macrophage | 6.58e-09 | 4 |
tissue-resident macrophage | 6.58e-09 | 4 |
macrophage dendritic cell progenitor | 6.58e-09 | 4 |
monoblast | 6.58e-09 | 4 |
promonocyte | 6.58e-09 | 4 |
bone marrow macrophage | 1.77e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.88e-09 | 6 |
cavity lining | 4.88e-09 | 6 |
serous membrane | 4.88e-09 | 6 |
gastrointestinal system mesentery | 4.88e-09 | 6 |
stomach region | 4.88e-09 | 6 |
mesentery | 4.88e-09 | 6 |
gastrointestinal system serosa | 4.88e-09 | 6 |
mesentery of stomach | 4.88e-09 | 6 |
gut mesentery | 4.88e-09 | 6 |
dorsal mesentery | 4.88e-09 | 6 |
dorsal mesogastrium | 4.88e-09 | 6 |
peritoneal cavity | 4.88e-09 | 6 |
spleen primordium | 4.88e-09 | 6 |
bone marrow | 5.96e-08 | 16 |
subdivision of trunk | 2.49e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.