FFCP PHASE1:Mm9::chr1:132744050..132744062,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=430|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:132744050..132744062,+|id=chr1:132744050..132744062,+|ontology_enrichment_celltype=CL:0002563!9.87e-12!9;CL:0002251!9.87e-12!9;CL:0000066!1.17e-11!25;CL:0000223!4.66e-09!20;CL:0000239!1.14e-07!6;CL:0000677!1.14e-07!6;CL:0000212!1.14e-07!6;CL:0000584!1.14e-07!6|ontology_enrichment_celltype_v019_2=CL:0000682,7.92e-11,3;CL:0000066,8.88e-08,25;CL:0000182,8.00e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.34e-22!15;UBERON:0001242!5.67e-19!13;UBERON:0000060!5.67e-19!13;UBERON:0001262!5.67e-19!13;UBERON:0004786!5.67e-19!13;UBERON:0000160!2.89e-18!43;UBERON:0001007!8.05e-14!128;UBERON:0001555!8.05e-14!128;UBERON:0007026!8.05e-14!128;UBERON:0004119!1.84e-13!130;UBERON:0000925!1.84e-13!130;UBERON:0006595!1.84e-13!130;UBERON:0005409!5.08e-13!59;UBERON:0004923!9.15e-13!24;UBERON:0004921!5.24e-12!126;UBERON:0004185!5.24e-12!126;UBERON:0003350!9.87e-12!9;UBERON:0004808!9.87e-12!9;UBERON:0001277!9.87e-12!9;UBERON:0000485!2.46e-09!11;UBERON:0000331!5.31e-07!3;UBERON:0002116!5.31e-07!3;UBERON:0001204!5.31e-07!3;UBERON:0001168!5.31e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.66e-15,31;UBERON:0002108,5.19e-15,4;UBERON:0000344,1.44e-14,15;UBERON:0000331,1.23e-11,3;UBERON:0002116,1.23e-11,3;UBERON:0001204,1.23e-11,3;UBERON:0001168,1.23e-11,3;UBERON:0005409,4.82e-11,47;UBERON:0001007,3.50e-10,116;UBERON:0001555,3.50e-10,116;UBERON:0007026,3.50e-10,116;UBERON:0004119,6.07e-10,118;UBERON:0000925,6.07e-10,118;UBERON:0006595,6.07e-10,118;UBERON:0001242,1.12e-09,13;UBERON:0001262,1.12e-09,13;UBERON:0004786,1.12e-09,13;UBERON:0004923,1.14e-08,24;UBERON:0001962,2.72e-08,2;UBERON:0001961,2.72e-08,2;UBERON:0001744,2.72e-08,2;UBERON:0004921,4.60e-08,114|phase1_expression=0,1.39590163055744,0.454999239389536,2.72217790176147,0,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.99981056983517,3.67054849707472,1.14846392823004,1.7230479846363,2.37018355954478,7.22088993934221,5.54466285471848,1.10865255327652,0,0,0,0.288851619751275,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,5.39703191637817,1.29955283489534,1.34408066129201,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59963200862735,0.264450566663544,0,0,0,0,0,0,5.21981967698963,0.494096864172033,0,0.198956472041151,0.19496408711912,6.29173586057955,6.48414149624083,4.77939055810481,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0.179397413521912,2.8946611281802,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46268449254406,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:132744050..132744062,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=430 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:132744050..132744062,+ | |||
|id=chr1:132744050..132744062,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.87e-12!9;CL:0002251!9.87e-12!9;CL:0000066!1.17e-11!25;CL:0000223!4.66e-09!20;CL:0000239!1.14e-07!6;CL:0000677!1.14e-07!6;CL:0000212!1.14e-07!6;CL:0000584!1.14e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.92e-11,3;CL:0000066,8.88e-08,25;CL:0000182,8.00e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.34e-22!15;UBERON:0001242!5.67e-19!13;UBERON:0000060!5.67e-19!13;UBERON:0001262!5.67e-19!13;UBERON:0004786!5.67e-19!13;UBERON:0000160!2.89e-18!43;UBERON:0001007!8.05e-14!128;UBERON:0001555!8.05e-14!128;UBERON:0007026!8.05e-14!128;UBERON:0004119!1.84e-13!130;UBERON:0000925!1.84e-13!130;UBERON:0006595!1.84e-13!130;UBERON:0005409!5.08e-13!59;UBERON:0004923!9.15e-13!24;UBERON:0004921!5.24e-12!126;UBERON:0004185!5.24e-12!126;UBERON:0003350!9.87e-12!9;UBERON:0004808!9.87e-12!9;UBERON:0001277!9.87e-12!9;UBERON:0000485!2.46e-09!11;UBERON:0000331!5.31e-07!3;UBERON:0002116!5.31e-07!3;UBERON:0001204!5.31e-07!3;UBERON:0001168!5.31e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.66e-15,31;UBERON:0002108,5.19e-15,4;UBERON:0000344,1.44e-14,15;UBERON:0000331,1.23e-11,3;UBERON:0002116,1.23e-11,3;UBERON:0001204,1.23e-11,3;UBERON:0001168,1.23e-11,3;UBERON:0005409,4.82e-11,47;UBERON:0001007,3.50e-10,116;UBERON:0001555,3.50e-10,116;UBERON:0007026,3.50e-10,116;UBERON:0004119,6.07e-10,118;UBERON:0000925,6.07e-10,118;UBERON:0006595,6.07e-10,118;UBERON:0001242,1.12e-09,13;UBERON:0001262,1.12e-09,13;UBERON:0004786,1.12e-09,13;UBERON:0004923,1.14e-08,24;UBERON:0001962,2.72e-08,2;UBERON:0001961,2.72e-08,2;UBERON:0001744,2.72e-08,2;UBERON:0004921,4.60e-08,114 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,2.72217790176147,0,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.99981056983517,3.67054849707472,1.14846392823004,1.7230479846363,2.37018355954478,7.22088993934221,5.54466285471848,1.10865255327652,0,0,0,0.288851619751275,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,5.39703191637817,1.29955283489534,1.34408066129201,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59963200862735,0.264450566663544,0,0,0,0,0,0,5.21981967698963,0.494096864172033,0,0.198956472041151,0.19496408711912,6.29173586057955,6.48414149624083,4.77939055810481,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0.179397413521912,2.8946611281802,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46268449254406,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:132744050..132744062,+ | |||
}} |
Revision as of 18:45, 13 September 2013
Short description: | p@chr1:132744050..132744062, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:132744050..132744062, + |
Coexpression cluster: | MCL_coexpression_mm9:430 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.92e-11 | 3 |
epithelial cell | 8.88e-08 | 25 |
hepatocyte | 8.00e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.66e-15 | 31 |
small intestine | 5.19e-15 | 4 |
mucosa | 1.44e-14 | 15 |
ileal mucosa | 1.23e-11 | 3 |
ileum | 1.23e-11 | 3 |
mucosa of small intestine | 1.23e-11 | 3 |
wall of small intestine | 1.23e-11 | 3 |
gastrointestinal system | 4.82e-11 | 47 |
digestive system | 3.50e-10 | 116 |
digestive tract | 3.50e-10 | 116 |
primitive gut | 3.50e-10 | 116 |
endoderm-derived structure | 6.07e-10 | 118 |
endoderm | 6.07e-10 | 118 |
presumptive endoderm | 6.07e-10 | 118 |
intestinal mucosa | 1.12e-09 | 13 |
wall of intestine | 1.12e-09 | 13 |
gastrointestinal system mucosa | 1.12e-09 | 13 |
organ component layer | 1.14e-08 | 24 |
gut-associated lymphoid tissue | 2.72e-08 | 2 |
mucosa-associated lymphoid tissue | 2.72e-08 | 2 |
lymphoid tissue | 2.72e-08 | 2 |
subdivision of digestive tract | 4.60e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.