FFCP PHASE1:Hg19::chr1:9302879..9302915,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:9302879..9302915,+|id=chr1:9302879..9302915,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002554;9.61e-07;2!CL:0002600;9.61e-07;2|ontology_enrichment_celltype_v019_2=CL:0002554,8.08e-07,2|ontology_enrichment_development_v019=UBERON:0005062;5.91e-07;4!UBERON:0007284;5.91e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;2.53e-07;2|ontology_enrichment_disease_v019_2=DOID:114,2.82e-07,2|ontology_enrichment_uberon=UBERON:0007023!1.45e-56!115;UBERON:0001049!1.40e-17!57;UBERON:0005068!1.40e-17!57;UBERON:0006241!1.40e-17!57;UBERON:0007135!1.40e-17!57;UBERON:0003075!1.04e-16!86;UBERON:0007284!1.04e-16!86;UBERON:0002616!1.54e-16!59;UBERON:0002346!3.83e-16!90;UBERON:0003080!3.18e-15!42;UBERON:0002780!2.28e-14!41;UBERON:0001890!2.28e-14!41;UBERON:0006240!2.28e-14!41;UBERON:0005743!2.77e-14!86;UBERON:0000955!3.94e-14!69;UBERON:0006238!3.94e-14!69;UBERON:0001017!1.74e-12!82;UBERON:0000033!8.73e-12!123;UBERON:0000073!9.39e-12!94;UBERON:0001016!9.39e-12!94;UBERON:0002020!1.05e-11!34;UBERON:0003528!1.05e-11!34;UBERON:0003056!1.07e-11!61;UBERON:0001893!1.24e-11!34;UBERON:0000153!2.63e-11!129;UBERON:0007811!2.63e-11!129;UBERON:0002791!4.20e-11!33;UBERON:0000481!5.38e-10!347;UBERON:0001869!5.57e-10!32;UBERON:0002298!1.99e-09!8;UBERON:0004111!4.49e-09!241;UBERON:0000477!6.99e-09!286;UBERON:0000475!7.05e-09!365;UBERON:0002619!3.41e-08!22;UBERON:0004121!3.55e-08!169;UBERON:0000924!4.51e-08!173;UBERON:0006601!4.51e-08!173;UBERON:0002420!2.95e-07!9;UBERON:0007245!2.95e-07!9;UBERON:0010009!2.95e-07!9;UBERON:0010011!2.95e-07!9;UBERON:0000454!2.95e-07!9;UBERON:0002308!3.51e-07!9;UBERON:0000125!3.51e-07!9;UBERON:0001950!7.47e-07!20;UBERON:0000956!8.61e-07!25;UBERON:0000203!8.61e-07!25;UBERON:0000483!8.78e-07!309|ontology_enrichment_uberon_v019=UBERON:0002365;1.47e-09;31!UBERON:0002330;1.47e-09;31!UBERON:0003978;3.83e-09;3!UBERON:0000946;3.83e-09;3!UBERON:0002107;1.37e-08;19!UBERON:0006925;1.37e-08;19!UBERON:0007023;4.52e-08;114!UBERON:0002423;8.64e-08;25!UBERON:0001829;9.89e-08;2!UBERON:0002081;4.57e-07;2!UBERON:0002133;9.61e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.79e-29,114;UBERON:0002365,1.52e-09,31;UBERON:0002330,1.52e-09,31;UBERON:0003978,2.22e-09,3;UBERON:0009751,2.22e-09,3;UBERON:0000946,2.22e-09,3;UBERON:0002523,2.22e-09,3;UBERON:0005983,2.22e-09,3;UBERON:0002165,2.22e-09,3;UBERON:0002062,2.22e-09,3;UBERON:0007280,2.22e-09,3;UBERON:0002107,1.27e-08,19;UBERON:0006925,1.27e-08,19;UBERON:0008836,1.27e-08,19;UBERON:0009497,8.71e-08,25;UBERON:0000015,8.71e-08,25;UBERON:0002423,8.71e-08,25;UBERON:0006235,8.71e-08,25;UBERON:0004161,8.71e-08,25;UBERON:0001829,1.01e-07,2;UBERON:0008835,2.92e-07,22;UBERON:0003894,2.92e-07,22;UBERON:0002081,4.59e-07,2;UBERON:0010227,4.59e-07,2;UBERON:0002133,6.38e-07,2;UBERON:0009854,6.90e-07,23|phase1_expression=0,0.856402095563933,0.563817616383885,0,1.34088328328186,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0,0,0,0.785874452986276,0,0,0.649094787309367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.816616685019573,0,1.75653827998801,0,0,1.82032272387605,2.15585442544872,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,13.9430538304014,1.96565443335525,1.18157981336281,0,2.45976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0.532844358032199,1.71573592389777,21.7048642156577,2.46972101034231,0,1.42156779497018,0.791951872933429,0.904318131178758,0,0.199945982364114,0,0,0,0,0,0,0.868687840005475,2.05476322550383,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0.246381468041427,0,0,0.846016147141356,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,3.25378394664303,2.98818933778395,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31510213706675,1.31178950409327,0,0,0,0,0.0982490410131212,0,0,2.53329162357197,0,0,0.349934720244983,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:9302879..9302915,+ | |||
|id=chr1:9302879..9302915,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002554;9.61e-07;2!CL:0002600;9.61e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002554,8.08e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.91e-07;4!UBERON:0007284;5.91e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.53e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.82e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.45e-56!115;UBERON:0001049!1.40e-17!57;UBERON:0005068!1.40e-17!57;UBERON:0006241!1.40e-17!57;UBERON:0007135!1.40e-17!57;UBERON:0003075!1.04e-16!86;UBERON:0007284!1.04e-16!86;UBERON:0002616!1.54e-16!59;UBERON:0002346!3.83e-16!90;UBERON:0003080!3.18e-15!42;UBERON:0002780!2.28e-14!41;UBERON:0001890!2.28e-14!41;UBERON:0006240!2.28e-14!41;UBERON:0005743!2.77e-14!86;UBERON:0000955!3.94e-14!69;UBERON:0006238!3.94e-14!69;UBERON:0001017!1.74e-12!82;UBERON:0000033!8.73e-12!123;UBERON:0000073!9.39e-12!94;UBERON:0001016!9.39e-12!94;UBERON:0002020!1.05e-11!34;UBERON:0003528!1.05e-11!34;UBERON:0003056!1.07e-11!61;UBERON:0001893!1.24e-11!34;UBERON:0000153!2.63e-11!129;UBERON:0007811!2.63e-11!129;UBERON:0002791!4.20e-11!33;UBERON:0000481!5.38e-10!347;UBERON:0001869!5.57e-10!32;UBERON:0002298!1.99e-09!8;UBERON:0004111!4.49e-09!241;UBERON:0000477!6.99e-09!286;UBERON:0000475!7.05e-09!365;UBERON:0002619!3.41e-08!22;UBERON:0004121!3.55e-08!169;UBERON:0000924!4.51e-08!173;UBERON:0006601!4.51e-08!173;UBERON:0002420!2.95e-07!9;UBERON:0007245!2.95e-07!9;UBERON:0010009!2.95e-07!9;UBERON:0010011!2.95e-07!9;UBERON:0000454!2.95e-07!9;UBERON:0002308!3.51e-07!9;UBERON:0000125!3.51e-07!9;UBERON:0001950!7.47e-07!20;UBERON:0000956!8.61e-07!25;UBERON:0000203!8.61e-07!25;UBERON:0000483!8.78e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;1.47e-09;31!UBERON:0002330;1.47e-09;31!UBERON:0003978;3.83e-09;3!UBERON:0000946;3.83e-09;3!UBERON:0002107;1.37e-08;19!UBERON:0006925;1.37e-08;19!UBERON:0007023;4.52e-08;114!UBERON:0002423;8.64e-08;25!UBERON:0001829;9.89e-08;2!UBERON:0002081;4.57e-07;2!UBERON:0002133;9.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.79e-29,114;UBERON:0002365,1.52e-09,31;UBERON:0002330,1.52e-09,31;UBERON:0003978,2.22e-09,3;UBERON:0009751,2.22e-09,3;UBERON:0000946,2.22e-09,3;UBERON:0002523,2.22e-09,3;UBERON:0005983,2.22e-09,3;UBERON:0002165,2.22e-09,3;UBERON:0002062,2.22e-09,3;UBERON:0007280,2.22e-09,3;UBERON:0002107,1.27e-08,19;UBERON:0006925,1.27e-08,19;UBERON:0008836,1.27e-08,19;UBERON:0009497,8.71e-08,25;UBERON:0000015,8.71e-08,25;UBERON:0002423,8.71e-08,25;UBERON:0006235,8.71e-08,25;UBERON:0004161,8.71e-08,25;UBERON:0001829,1.01e-07,2;UBERON:0008835,2.92e-07,22;UBERON:0003894,2.92e-07,22;UBERON:0002081,4.59e-07,2;UBERON:0010227,4.59e-07,2;UBERON:0002133,6.38e-07,2;UBERON:0009854,6.90e-07,23 | |||
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|short_description=p@chr1:9302879..9302915,+ | |||
}} |
Revision as of 07:13, 12 September 2013
Short description: | p@chr1:9302879..9302915, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:9302879..9302915, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of lymphatic vessel | 8.08e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.79e-29 | 114 |
exocrine gland | 1.52e-09 | 31 |
exocrine system | 1.52e-09 | 31 |
valve | 2.22e-09 | 3 |
cardiac mesenchyme | 2.22e-09 | 3 |
cardial valve | 2.22e-09 | 3 |
tunica intima | 2.22e-09 | 3 |
heart layer | 2.22e-09 | 3 |
endocardium | 2.22e-09 | 3 |
endocardial cushion | 2.22e-09 | 3 |
presumptive endocardium | 2.22e-09 | 3 |
liver | 1.27e-08 | 19 |
digestive gland | 1.27e-08 | 19 |
liver bud | 1.27e-08 | 19 |
epithelium of foregut-midgut junction | 8.71e-08 | 25 |
anatomical boundary | 8.71e-08 | 25 |
hepatobiliary system | 8.71e-08 | 25 |
foregut-midgut junction | 8.71e-08 | 25 |
septum transversum | 8.71e-08 | 25 |
major salivary gland | 1.01e-07 | 2 |
hepatic diverticulum | 2.92e-07 | 22 |
liver primordium | 2.92e-07 | 22 |
cardiac atrium | 4.59e-07 | 2 |
future cardiac atrium | 4.59e-07 | 2 |
atrioventricular valve | 6.38e-07 | 2 |
digestive tract diverticulum | 6.90e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.82e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.