FFCP PHASE1:Hg19::chr1:57775471..57775512,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C25|description=CAGE_peak_at_chr1:57775471..57775512,-|id=chr1:57775471..57775512,-|ontology_enrichment_celltype=CL:0000181!2.78e-14!12;CL:0000417!2.78e-14!12;CL:0000668!2.78e-14!12;CL:0000414!2.78e-14!12;CL:0000412!2.78e-14!12;CL:0000182!2.78e-14!12;CL:0000223!4.89e-08!59;CL:0002563!6.71e-08!4|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004161;3.83e-08;11!UBERON:0009497;5.03e-07;13|ontology_enrichment_disease=DOID:8552!4.41e-08!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.16e-17!19;UBERON:0006925!5.16e-17!19;UBERON:0008836!5.16e-17!19;UBERON:0000160!2.93e-15!27;UBERON:0005409!1.15e-14!35;UBERON:0008835!1.38e-14!22;UBERON:0003894!1.38e-14!22;UBERON:0009854!6.46e-14!23;UBERON:0007499!9.73e-13!25;UBERON:0009497!9.73e-13!25;UBERON:0000015!9.73e-13!25;UBERON:0002423!9.73e-13!25;UBERON:0006235!9.73e-13!25;UBERON:0004161!9.73e-13!25;UBERON:0004921!3.01e-12!129;UBERON:0004185!3.01e-12!129;UBERON:0005057!3.23e-12!26;UBERON:0009856!3.23e-12!26;UBERON:0003929!4.34e-11!54;UBERON:0000059!1.45e-10!11;UBERON:0002365!4.09e-10!31;UBERON:0002330!4.09e-10!31;UBERON:0004119!8.58e-10!169;UBERON:0000925!8.58e-10!169;UBERON:0006595!8.58e-10!169;UBERON:0001007!1.19e-09!155;UBERON:0001555!1.19e-09!155;UBERON:0007026!1.19e-09!155;UBERON:0002368!7.28e-09!35;UBERON:0001052!6.04e-08!4;UBERON:0001242!6.71e-08!4;UBERON:0001262!6.71e-08!4;UBERON:0004786!6.71e-08!4;UBERON:0004808!6.71e-08!4;UBERON:0001277!6.71e-08!4;UBERON:0002363!7.16e-08!1;UBERON:0007647!7.16e-08!1;UBERON:0010115!7.16e-08!1;UBERON:0001155!1.14e-07!9;UBERON:0005911!9.66e-07!82|ontology_enrichment_uberon_v019=UBERON:0000160;1.53e-39;17!UBERON:0002108;1.31e-36;4!UBERON:0005409;5.56e-31;22!UBERON:0004921;1.54e-19;33!UBERON:0000059;8.12e-17;11!UBERON:0000922;2.70e-10;49!UBERON:0001155;8.27e-10;9!UBERON:0001555;6.95e-09;54!UBERON:0001007;8.24e-09;81!UBERON:0002114;6.13e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.53e-39,17;UBERON:0002108,1.39e-36,4;UBERON:0005409,2.02e-27,25;UBERON:0000059,7.90e-17,11;UBERON:0004921,2.43e-10,118;UBERON:0001155,8.09e-10,9;UBERON:0001007,2.39e-08,145;UBERON:0001555,2.39e-08,145;UBERON:0007026,2.39e-08,145;UBERON:0002114,6.34e-08,2;UBERON:0004119,1.59e-07,160;UBERON:0000925,1.59e-07,160;UBERON:0006595,1.59e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0.282706142867882,0,0,18.2222582876879,10.9985426088053,0,0,0,0,0,0,0,0,0,0,18.1486074072996,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9795139432945,0.0787831823072236,0.329663433524666,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73947616152849,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.4784275134024,52.4542945209498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,13.225671012885,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:57775471..57775512,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr1:57775471..57775512,- | |||
|id=chr1:57775471..57775512,- | |||
|ontology_enrichment_celltype=CL:0000181!2.78e-14!12;CL:0000417!2.78e-14!12;CL:0000668!2.78e-14!12;CL:0000414!2.78e-14!12;CL:0000412!2.78e-14!12;CL:0000182!2.78e-14!12;CL:0000223!4.89e-08!59;CL:0002563!6.71e-08!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.83e-08;11!UBERON:0009497;5.03e-07;13 | |||
|ontology_enrichment_disease=DOID:8552!4.41e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000160;1.53e-39;17!UBERON:0002108;1.31e-36;4!UBERON:0005409;5.56e-31;22!UBERON:0004921;1.54e-19;33!UBERON:0000059;8.12e-17;11!UBERON:0000922;2.70e-10;49!UBERON:0001155;8.27e-10;9!UBERON:0001555;6.95e-09;54!UBERON:0001007;8.24e-09;81!UBERON:0002114;6.13e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.53e-39,17;UBERON:0002108,1.39e-36,4;UBERON:0005409,2.02e-27,25;UBERON:0000059,7.90e-17,11;UBERON:0004921,2.43e-10,118;UBERON:0001155,8.09e-10,9;UBERON:0001007,2.39e-08,145;UBERON:0001555,2.39e-08,145;UBERON:0007026,2.39e-08,145;UBERON:0002114,6.34e-08,2;UBERON:0004119,1.59e-07,160;UBERON:0000925,1.59e-07,160;UBERON:0006595,1.59e-07,160 | |||
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|short_description=p@chr1:57775471..57775512,- | |||
}} |
Revision as of 06:14, 12 September 2013
Short description: | p@chr1:57775471..57775512, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:57775471..57775512, - |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.53e-39 | 17 |
small intestine | 1.39e-36 | 4 |
gastrointestinal system | 2.02e-27 | 25 |
large intestine | 7.90e-17 | 11 |
subdivision of digestive tract | 2.43e-10 | 118 |
colon | 8.09e-10 | 9 |
digestive system | 2.39e-08 | 145 |
digestive tract | 2.39e-08 | 145 |
primitive gut | 2.39e-08 | 145 |
duodenum | 6.34e-08 | 2 |
endoderm-derived structure | 1.59e-07 | 160 |
endoderm | 1.59e-07 | 160 |
presumptive endoderm | 1.59e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.