FFCP PHASE1:Hg19::chr1:205326161..205326172,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55220|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25573|TSSclassifier=S|UniProt=Q8IYD2|association_with_transcript=0bp_to_ENST00000367156,uc001hcg.1_5end|coexpression_cluster_id=C337|description=CAGE_peak_12_at_KLHDC8A_5end|id=chr1:205326161..205326172,-|ontology_enrichment_celltype=CL:0002319!5.72e-15!25;CL:0000047!1.72e-14!8;CL:0000540!1.37e-12!6;CL:0000031!1.37e-12!6;CL:0000404!1.37e-12!6;CL:0000133!6.72e-07!59|ontology_enrichment_celltype_v019=CL:0000047;3.18e-11;2!CL:0002319;3.19e-07;25|ontology_enrichment_celltype_v019_2=CL:0000047,8.06e-11,8;CL:0002319,3.44e-07,25|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!6.03e-31!86;UBERON:0001017!5.25e-30!82;UBERON:0000073!5.73e-30!94;UBERON:0001016!5.73e-30!94;UBERON:0002780!1.43e-26!41;UBERON:0001890!1.43e-26!41;UBERON:0006240!1.43e-26!41;UBERON:0003080!7.31e-26!42;UBERON:0000955!1.30e-22!69;UBERON:0006238!1.30e-22!69;UBERON:0003056!2.06e-21!61;UBERON:0001049!1.38e-20!57;UBERON:0005068!1.38e-20!57;UBERON:0006241!1.38e-20!57;UBERON:0007135!1.38e-20!57;UBERON:0002616!9.24e-20!59;UBERON:0003296!2.30e-19!4;UBERON:0010133!2.30e-19!4;UBERON:0000924!4.93e-19!173;UBERON:0006601!4.93e-19!173;UBERON:0002346!2.10e-18!90;UBERON:0004121!3.67e-18!169;UBERON:0003075!1.54e-17!86;UBERON:0007284!1.54e-17!86;UBERON:0001894!7.22e-17!7;UBERON:0006222!7.22e-17!7;UBERON:0001869!2.35e-16!32;UBERON:0002791!8.40e-16!33;UBERON:0000153!2.23e-15!129;UBERON:0007811!2.23e-15!129;UBERON:0002020!2.79e-15!34;UBERON:0003528!2.79e-15!34;UBERON:0001893!2.79e-15!34;UBERON:0000033!7.15e-15!123;UBERON:0007023!3.83e-12!115;UBERON:0000007!8.68e-11!2;UBERON:0001905!2.55e-10!2;UBERON:0002757!2.55e-10!2;UBERON:0010134!2.55e-10!2;UBERON:0002784!2.55e-10!2;UBERON:0005408!2.55e-10!2;UBERON:0001899!2.55e-10!2;UBERON:0000369!2.71e-10!4;UBERON:0002435!2.71e-10!4;UBERON:0000204!2.71e-10!4;UBERON:0010082!2.71e-10!4;UBERON:0009663!4.58e-10!7;UBERON:0000956!1.86e-09!25;UBERON:0000203!1.86e-09!25;UBERON:0001950!2.94e-09!20;UBERON:0002619!2.25e-08!22;UBERON:0002308!7.53e-08!9;UBERON:0002420!7.53e-08!9;UBERON:0000125!7.53e-08!9;UBERON:0007245!7.53e-08!9;UBERON:0010009!7.53e-08!9;UBERON:0010011!7.53e-08!9;UBERON:0000454!7.53e-08!9|ontology_enrichment_uberon_v019=UBERON:0000007;3.00e-40;2!UBERON:0003296;1.04e-20;4!UBERON:0010133;1.04e-20;4!UBERON:0001894;2.81e-12;7|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.64e-40,2;UBERON:0003296,7.74e-21,4;UBERON:0010133,7.74e-21,4;UBERON:0001894,2.37e-12,7;UBERON:0006222,2.37e-12,7;UBERON:0001016,2.60e-10,89;UBERON:0001017,1.73e-08,81|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10678907948985,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61737217095023,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,4.88867134270172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.672567444437648,1.21393120847326,1.36597314810779,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.929195074296532,0.158013611732727,2.09234565662625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994753875806841,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55220 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |||
|TSSclassifier=S | |||
|UniProt=Q8IYD2 | |||
|association_with_transcript=0bp_to_ENST00000367156,uc001hcg.1_5end | |||
|coexpression_cluster_id=C337 | |||
|description=CAGE_peak_12_at_KLHDC8A_5end | |||
|id=chr1:205326161..205326172,- | |||
|ontology_enrichment_celltype=CL:0002319!5.72e-15!25;CL:0000047!1.72e-14!8;CL:0000540!1.37e-12!6;CL:0000031!1.37e-12!6;CL:0000404!1.37e-12!6;CL:0000133!6.72e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.18e-11;2!CL:0002319;3.19e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.06e-11,8;CL:0002319,3.44e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000007;3.00e-40;2!UBERON:0003296;1.04e-20;4!UBERON:0010133;1.04e-20;4!UBERON:0001894;2.81e-12;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.64e-40,2;UBERON:0003296,7.74e-21,4;UBERON:0010133,7.74e-21,4;UBERON:0001894,2.37e-12,7;UBERON:0006222,2.37e-12,7;UBERON:0001016,2.60e-10,89;UBERON:0001017,1.73e-08,81 | |||
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|short_description=p12@KLHDC8A | |||
}} |
Revision as of 03:04, 12 September 2013
Short description: | p12@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_KLHDC8A_5end |
Coexpression cluster: | C337_ovary_testis_Adipocyte_mesothelioma_chorionic_placenta_spleen |
Association with transcript: | 0bp_to_ENST00000367156, uc001hcg.1_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | Q8IYD2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.06e-11 | 8 |
neural cell | 3.44e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.64e-40 | 2 |
gland of diencephalon | 7.74e-21 | 4 |
neuroendocrine gland | 7.74e-21 | 4 |
diencephalon | 2.37e-12 | 7 |
future diencephalon | 2.37e-12 | 7 |
nervous system | 2.60e-10 | 89 |
central nervous system | 1.73e-08 | 81 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.