FFCP PHASE1:Hg19::chr10:33244262..33244283,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C38|description=CAGE_peak_at_chr10:33244262..33244283,-|id=chr10:33244262..33244283,-|ontology_enrichment_celltype=CL:0002334!1.24e-09!12;CL:0000057!2.58e-09!75;CL:0002620!8.58e-07!23|ontology_enrichment_celltype_v019=CL:1000306;5.73e-08;4!CL:0002547;5.73e-08;4!CL:0002539;8.44e-07;10|ontology_enrichment_celltype_v019_2=CL:1000306,3.97e-08,4;CL:0002547,3.97e-08,4;CL:0002539,6.57e-07,10|ontology_enrichment_development_v019=UBERON:0005795;8.44e-07;10!UBERON:0003918;8.44e-07;10!UBERON:0007687;8.44e-07;10|ontology_enrichment_disease=DOID:2394!1.51e-08!14|ontology_enrichment_disease_v019=DOID:0060084;1.71e-21;3!DOID:127;1.71e-21;3!DOID:0060072;2.84e-16;4!DOID:3371;9.77e-09;1!DOID:4549;9.77e-09;1!DOID:5861;9.77e-09;1!DOID:6496;9.77e-09;1!DOID:6193;3.56e-08;1|ontology_enrichment_disease_v019_2=DOID:0060084,6.21e-22,3;DOID:127,6.21e-22,3;DOID:0060072,1.34e-16,4;DOID:3371,9.79e-09,1;DOID:4549,9.79e-09,1;DOID:5861,9.79e-09,1;DOID:6496,9.79e-09,1;DOID:6193,2.33e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000947;3.75e-08;21!UBERON:0010191;3.75e-08;21!UBERON:0004797;5.73e-08;4!UBERON:0000415;5.73e-08;4!UBERON:0007240;5.73e-08;4!UBERON:0005742;5.73e-08;4!UBERON:0005734;5.73e-08;4!UBERON:0004664;5.73e-08;4!UBERON:0004663;5.73e-08;4!UBERON:0004237;8.44e-07;10!UBERON:0004695;8.44e-07;10!UBERON:0002111;8.44e-07;10!UBERON:0004178;8.44e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0000947,2.62e-08,21;UBERON:0010191,2.62e-08,21;UBERON:0000415,3.97e-08,4;UBERON:0007240,3.97e-08,4;UBERON:0005742,3.97e-08,4;UBERON:0005734,3.97e-08,4;UBERON:0004664,3.97e-08,4;UBERON:0004663,3.97e-08,4;UBERON:0004237,6.57e-07,10;UBERON:0004695,6.57e-07,10;UBERON:0002111,6.57e-07,10;UBERON:0004178,6.57e-07,10|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,1.46062018077475,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0.534880391567015,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,1.98613771219828,2.58152958673932,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0.213557388818567,0,0.600182192168805,0.412210116953756,0.515281080091258,0.37223371266318,1.18143432568886,1.36411807225678,1.26216887122057,0.184099797284599,0.161646056818812,1.42003837006646,0.503760491138201,0.169560592310488,0.193260853163297,0,0.860413786167011,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0.404493924480493,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0.850650583454319,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.517086863031111,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.602878754119172,0.871533458600294,0.199945982364114,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.61384789315225,0.280660094433074,0.384417447767103,1.02341449813341,0.160853921143607,0,0.154209693802656,0.355123450626254,0.657017248110473,1.03850885836724,0.232420756919918,0,0.200506470303285,0.184161977871793,0.229628896329213,0.182091168006717,0,0,0.231046011313244,0,0,0.73886140225013,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.384380134730212,0,0.10115778085555,0,2.83331112147576,0,0,0,0,0.55597265731176,0.715624433709956,0.372158369359667,0,0,0,0.855877976067841,0,0.78494864019923,0,0,0,0.404364963146632,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0.608731130888112,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0.238231775457789,0,0,0,0,2.02965735142199,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0.445773537109913,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0.394584402849391,0,0,0,0,0,0,0.330991955875499,0,0,0,0.416024019039416,0,0,0,0,1.71986032471617,0,0,0,0.0969890164884194,15.533078297704,0,0.411125773940253,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,1.27134268827375,1.62899880526114,2.5926644736038,1.95952416065645,0,0,0.340776043570843,0,0.146552233678082,0,0,0,1.53978154095896,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,1.22538230705385,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.470531639396343,0,0,0.597019211547496,0,0,0,0,0,0.228840068396924,0.453692771289717,0.310874401165561,0.147855149989634,0.159296767163702,1.34940933649081,0.465788870628778,0.414706207840855,1.06336685823198,0.521745061811734,0.751288044986092,3.04644169735036,0.406870733204662,0.363697318405119,0,0,0.398095888698616,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0.179088841081487,0,0,0.353378291891762,0,0.168942440653073,0.512483037175893,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0,0,0,0,0,0.827356886187777,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0.23248285073625,0,0,0,0.51215543128185,2.07377898544228,0,0.118332000730565,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25755282949222,0,0,0,0,0,0|short_description=p@chr10:33244262..33244283,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr10:33244262..33244283,- | |||
|id=chr10:33244262..33244283,- | |||
|ontology_enrichment_celltype=CL:0002334!1.24e-09!12;CL:0000057!2.58e-09!75;CL:0002620!8.58e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:1000306;5.73e-08;4!CL:0002547;5.73e-08;4!CL:0002539;8.44e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,3.97e-08,4;CL:0002547,3.97e-08,4;CL:0002539,6.57e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0005795;8.44e-07;10!UBERON:0003918;8.44e-07;10!UBERON:0007687;8.44e-07;10 | |||
|ontology_enrichment_disease=DOID:2394!1.51e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.71e-21;3!DOID:127;1.71e-21;3!DOID:0060072;2.84e-16;4!DOID:3371;9.77e-09;1!DOID:4549;9.77e-09;1!DOID:5861;9.77e-09;1!DOID:6496;9.77e-09;1!DOID:6193;3.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.21e-22,3;DOID:127,6.21e-22,3;DOID:0060072,1.34e-16,4;DOID:3371,9.79e-09,1;DOID:4549,9.79e-09,1;DOID:5861,9.79e-09,1;DOID:6496,9.79e-09,1;DOID:6193,2.33e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000947;3.75e-08;21!UBERON:0010191;3.75e-08;21!UBERON:0004797;5.73e-08;4!UBERON:0000415;5.73e-08;4!UBERON:0007240;5.73e-08;4!UBERON:0005742;5.73e-08;4!UBERON:0005734;5.73e-08;4!UBERON:0004664;5.73e-08;4!UBERON:0004663;5.73e-08;4!UBERON:0004237;8.44e-07;10!UBERON:0004695;8.44e-07;10!UBERON:0002111;8.44e-07;10!UBERON:0004178;8.44e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,2.62e-08,21;UBERON:0010191,2.62e-08,21;UBERON:0000415,3.97e-08,4;UBERON:0007240,3.97e-08,4;UBERON:0005742,3.97e-08,4;UBERON:0005734,3.97e-08,4;UBERON:0004664,3.97e-08,4;UBERON:0004663,3.97e-08,4;UBERON:0004237,6.57e-07,10;UBERON:0004695,6.57e-07,10;UBERON:0002111,6.57e-07,10;UBERON:0004178,6.57e-07,10 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,1.46062018077475,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0.534880391567015,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,1.98613771219828,2.58152958673932,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0.213557388818567,0,0.600182192168805,0.412210116953756,0.515281080091258,0.37223371266318,1.18143432568886,1.36411807225678,1.26216887122057,0.184099797284599,0.161646056818812,1.42003837006646,0.503760491138201,0.169560592310488,0.193260853163297,0,0.860413786167011,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0.404493924480493,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0.850650583454319,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.517086863031111,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.602878754119172,0.871533458600294,0.199945982364114,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.61384789315225,0.280660094433074,0.384417447767103,1.02341449813341,0.160853921143607,0,0.154209693802656,0.355123450626254,0.657017248110473,1.03850885836724,0.232420756919918,0,0.200506470303285,0.184161977871793,0.229628896329213,0.182091168006717,0,0,0.231046011313244,0,0,0.73886140225013,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.384380134730212,0,0.10115778085555,0,2.83331112147576,0,0,0,0,0.55597265731176,0.715624433709956,0.372158369359667,0,0,0,0.855877976067841,0,0.78494864019923,0,0,0,0.404364963146632,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0.608731130888112,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0.238231775457789,0,0,0,0,2.02965735142199,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0.445773537109913,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0.394584402849391,0,0,0,0,0,0,0.330991955875499,0,0,0,0.416024019039416,0,0,0,0,1.71986032471617,0,0,0,0.0969890164884194,15.533078297704,0,0.411125773940253,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,1.27134268827375,1.62899880526114,2.5926644736038,1.95952416065645,0,0,0.340776043570843,0,0.146552233678082,0,0,0,1.53978154095896,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,1.22538230705385,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.470531639396343,0,0,0.597019211547496,0,0,0,0,0,0.228840068396924,0.453692771289717,0.310874401165561,0.147855149989634,0.159296767163702,1.34940933649081,0.465788870628778,0.414706207840855,1.06336685823198,0.521745061811734,0.751288044986092,3.04644169735036,0.406870733204662,0.363697318405119,0,0,0.398095888698616,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0.179088841081487,0,0,0.353378291891762,0,0.168942440653073,0.512483037175893,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0,0,0,0,0,0.827356886187777,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0.23248285073625,0,0,0,0.51215543128185,2.07377898544228,0,0.118332000730565,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25755282949222,0,0,0,0,0,0 | |||
|short_description=p@chr10:33244262..33244283,- | |||
}} |
Revision as of 13:13, 10 September 2013
Short description: | p@chr10:33244262..33244283, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:33244262..33244283, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 3.97e-08 | 4 |
fibroblast of the aortic adventitia | 3.97e-08 | 4 |
aortic smooth muscle cell | 6.57e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
aorta | 2.62e-08 | 21 |
aortic system | 2.62e-08 | 21 |
artery wall | 3.97e-08 | 4 |
tunica adventitia of artery | 3.97e-08 | 4 |
adventitia | 3.97e-08 | 4 |
tunica adventitia of blood vessel | 3.97e-08 | 4 |
aorta tunica adventitia | 3.97e-08 | 4 |
aorta wall | 3.97e-08 | 4 |
blood vessel smooth muscle | 6.57e-07 | 10 |
arterial system smooth muscle | 6.57e-07 | 10 |
artery smooth muscle tissue | 6.57e-07 | 10 |
aorta smooth muscle tissue | 6.57e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.21e-22 | 3 |
leiomyoma | 6.21e-22 | 3 |
benign neoplasm | 1.34e-16 | 4 |
chondrosarcoma | 9.79e-09 | 1 |
extraosseous chondrosarcoma | 9.79e-09 | 1 |
myxoid chondrosarcoma | 9.79e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 9.79e-09 | 1 |
epithelioid sarcoma | 2.33e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.