FFCP PHASE1:Hg19::chr10:74080233..74080264,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C8|description=CAGE_peak_at_chr10:74080233..74080264,+|id=chr10:74080233..74080264,+|ontology_enrichment_celltype=CL:0002087!1.52e-43!119;CL:0000738!5.24e-43!140;CL:0002031!7.68e-37!124;CL:0002057!9.71e-35!42;CL:0000037!2.82e-34!172;CL:0000566!2.82e-34!172;CL:0000988!2.43e-33!182;CL:0000860!5.71e-32!45;CL:0002032!4.75e-31!165;CL:0000837!4.75e-31!165;CL:0000766!6.79e-23!76;CL:0002194!1.69e-20!63;CL:0000576!1.69e-20!63;CL:0000040!1.69e-20!63;CL:0000559!1.69e-20!63;CL:0002009!1.12e-19!65;CL:0000839!1.88e-19!70;CL:0000557!4.35e-19!71;CL:0000838!1.41e-17!52;CL:0000542!3.82e-17!53;CL:0000051!3.82e-17!53;CL:0000763!2.01e-14!112;CL:0000049!2.01e-14!112;CL:0000134!1.75e-13!358;CL:0002320!5.76e-13!365;CL:0000219!7.73e-12!390;CL:0000623!1.04e-10!3;CL:0000825!1.04e-10!3;CL:0000048!3.23e-10!430;CL:0000842!3.55e-10!3;CL:0000767!4.13e-10!3;CL:0000723!6.87e-10!436;CL:0000034!1.82e-09!444;CL:0000080!1.17e-08!6;CL:0000945!9.88e-08!24;CL:0000826!9.88e-08!24;CL:0000224!1.03e-07!4;CL:0000893!6.45e-07!2;CL:0002489!6.45e-07!2;CL:0000809!6.45e-07!2;CL:0000808!6.45e-07!2;CL:0000894!6.45e-07!2;CL:0000806!6.45e-07!2;CL:0000807!6.45e-07!2;CL:0000805!6.45e-07!2;CL:0002425!6.45e-07!2|ontology_enrichment_celltype_v019=CL:0000623;1.01e-36;3!CL:0002393;5.61e-18;6!CL:0002397;5.61e-18;6!CL:0000226;2.03e-16;3!CL:0000842;2.03e-16;3!CL:0002087;5.21e-10;104!CL:0000766;1.85e-08;69!CL:0000576;1.54e-07;48|ontology_enrichment_celltype_v019_2=CL:0000623,1.14e-36,3;CL:0000825,1.14e-36,3;CL:0002087,6.55e-21,115;CL:0000738,5.53e-20,136;CL:0000988,4.61e-17,177;CL:0000226,1.74e-16,3;CL:0000842,1.74e-16,3;CL:0000037,7.84e-16,168;CL:0002031,9.79e-15,120;CL:0000860,4.78e-13,42;CL:0002057,4.78e-13,42;CL:0002032,2.18e-12,161;CL:0000837,2.18e-12,161;CL:0002393,2.81e-12,9;CL:0002397,2.81e-12,9;CL:0000473,2.43e-11,48;CL:0000234,2.43e-11,48;CL:0000766,2.26e-09,72;CL:0002194,6.00e-09,59;CL:0000576,6.00e-09,59;CL:0000040,6.00e-09,59;CL:0000559,6.00e-09,59;CL:0002009,1.22e-08,61;CL:0000839,6.03e-08,66;CL:0000838,6.88e-08,52;CL:0000557,8.07e-08,67;CL:0000542,9.87e-08,53;CL:0000051,9.87e-08,53|ontology_enrichment_development_v019=CL:0002057;3.26e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.57e-21!102;UBERON:0003061!3.57e-21!102;UBERON:0002193!1.54e-18!112;UBERON:0002371!8.24e-18!80;UBERON:0001474!4.18e-16!86;UBERON:0002405!8.03e-15!115;UBERON:0004765!9.63e-13!101;UBERON:0001434!9.63e-13!101;UBERON:0002384!2.90e-12!375;UBERON:0003081!1.01e-07!216|ontology_enrichment_uberon_v019=UBERON:0000178;1.57e-07;15!UBERON:0000179;1.57e-07;15!UBERON:0000463;1.57e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.68e-10,98;UBERON:0003061,1.68e-10,98;UBERON:0002193,2.03e-09,108;UBERON:0000178,1.61e-07,15;UBERON:0000179,1.61e-07,15;UBERON:0000463,1.61e-07,15;UBERON:0002371,7.90e-07,76|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.157421562627358,1.18009283054671,0.767658796194425,0.77408061658038,0,0,0,0,0.284338464974843,0,1.66198622559563,1.20326668482085,1.30206522429511,0,0,0,0,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0,0.512321413058201,0,0.689491361473237,1.29096936716765,0,0.188242339542605,0.545812300115692,0,2.44867113896722,0.641858054152187,0,0.329851300186716,0.199463657621632,0,1.7412554317715,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,0.605399502633369,0,1.26584954976354,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766440987203842,0.68725489096526,0,0,0,0,0,0,0,0,0,2.21767417547206,3.7441627409691,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,3.74358444383662,4.74380664690938,3.46526197955321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.2942852049117,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr10:74080233..74080264,+ | |||
|id=chr10:74080233..74080264,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.52e-43!119;CL:0000738!5.24e-43!140;CL:0002031!7.68e-37!124;CL:0002057!9.71e-35!42;CL:0000037!2.82e-34!172;CL:0000566!2.82e-34!172;CL:0000988!2.43e-33!182;CL:0000860!5.71e-32!45;CL:0002032!4.75e-31!165;CL:0000837!4.75e-31!165;CL:0000766!6.79e-23!76;CL:0002194!1.69e-20!63;CL:0000576!1.69e-20!63;CL:0000040!1.69e-20!63;CL:0000559!1.69e-20!63;CL:0002009!1.12e-19!65;CL:0000839!1.88e-19!70;CL:0000557!4.35e-19!71;CL:0000838!1.41e-17!52;CL:0000542!3.82e-17!53;CL:0000051!3.82e-17!53;CL:0000763!2.01e-14!112;CL:0000049!2.01e-14!112;CL:0000134!1.75e-13!358;CL:0002320!5.76e-13!365;CL:0000219!7.73e-12!390;CL:0000623!1.04e-10!3;CL:0000825!1.04e-10!3;CL:0000048!3.23e-10!430;CL:0000842!3.55e-10!3;CL:0000767!4.13e-10!3;CL:0000723!6.87e-10!436;CL:0000034!1.82e-09!444;CL:0000080!1.17e-08!6;CL:0000945!9.88e-08!24;CL:0000826!9.88e-08!24;CL:0000224!1.03e-07!4;CL:0000893!6.45e-07!2;CL:0002489!6.45e-07!2;CL:0000809!6.45e-07!2;CL:0000808!6.45e-07!2;CL:0000894!6.45e-07!2;CL:0000806!6.45e-07!2;CL:0000807!6.45e-07!2;CL:0000805!6.45e-07!2;CL:0002425!6.45e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.01e-36;3!CL:0002393;5.61e-18;6!CL:0002397;5.61e-18;6!CL:0000226;2.03e-16;3!CL:0000842;2.03e-16;3!CL:0002087;5.21e-10;104!CL:0000766;1.85e-08;69!CL:0000576;1.54e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.14e-36,3;CL:0000825,1.14e-36,3;CL:0002087,6.55e-21,115;CL:0000738,5.53e-20,136;CL:0000988,4.61e-17,177;CL:0000226,1.74e-16,3;CL:0000842,1.74e-16,3;CL:0000037,7.84e-16,168;CL:0002031,9.79e-15,120;CL:0000860,4.78e-13,42;CL:0002057,4.78e-13,42;CL:0002032,2.18e-12,161;CL:0000837,2.18e-12,161;CL:0002393,2.81e-12,9;CL:0002397,2.81e-12,9;CL:0000473,2.43e-11,48;CL:0000234,2.43e-11,48;CL:0000766,2.26e-09,72;CL:0002194,6.00e-09,59;CL:0000576,6.00e-09,59;CL:0000040,6.00e-09,59;CL:0000559,6.00e-09,59;CL:0002009,1.22e-08,61;CL:0000839,6.03e-08,66;CL:0000838,6.88e-08,52;CL:0000557,8.07e-08,67;CL:0000542,9.87e-08,53;CL:0000051,9.87e-08,53 | |||
|ontology_enrichment_development_v019=CL:0002057;3.26e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.57e-21!102;UBERON:0003061!3.57e-21!102;UBERON:0002193!1.54e-18!112;UBERON:0002371!8.24e-18!80;UBERON:0001474!4.18e-16!86;UBERON:0002405!8.03e-15!115;UBERON:0004765!9.63e-13!101;UBERON:0001434!9.63e-13!101;UBERON:0002384!2.90e-12!375;UBERON:0003081!1.01e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.57e-07;15!UBERON:0000179;1.57e-07;15!UBERON:0000463;1.57e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.68e-10,98;UBERON:0003061,1.68e-10,98;UBERON:0002193,2.03e-09,108;UBERON:0000178,1.61e-07,15;UBERON:0000179,1.61e-07,15;UBERON:0000463,1.61e-07,15;UBERON:0002371,7.90e-07,76 | |||
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|short_description=p@chr10:74080233..74080264,+ | |||
}} |
Revision as of 14:19, 10 September 2013
Short description: | p@chr10:74080233..74080264, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:74080233..74080264, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.14e-36 | 3 |
pro-NK cell | 1.14e-36 | 3 |
nongranular leukocyte | 6.55e-21 | 115 |
leukocyte | 5.53e-20 | 136 |
hematopoietic cell | 4.61e-17 | 177 |
single nucleate cell | 1.74e-16 | 3 |
mononuclear cell | 1.74e-16 | 3 |
hematopoietic stem cell | 7.84e-16 | 168 |
hematopoietic lineage restricted progenitor cell | 9.79e-15 | 120 |
classical monocyte | 4.78e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.78e-13 | 42 |
hematopoietic oligopotent progenitor cell | 2.18e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-12 | 161 |
intermediate monocyte | 2.81e-12 | 9 |
CD14-positive, CD16-positive monocyte | 2.81e-12 | 9 |
defensive cell | 2.43e-11 | 48 |
phagocyte | 2.43e-11 | 48 |
myeloid leukocyte | 2.26e-09 | 72 |
monopoietic cell | 6.00e-09 | 59 |
monocyte | 6.00e-09 | 59 |
monoblast | 6.00e-09 | 59 |
promonocyte | 6.00e-09 | 59 |
macrophage dendritic cell progenitor | 1.22e-08 | 61 |
myeloid lineage restricted progenitor cell | 6.03e-08 | 66 |
lymphoid lineage restricted progenitor cell | 6.88e-08 | 52 |
granulocyte monocyte progenitor cell | 8.07e-08 | 67 |
lymphocyte | 9.87e-08 | 53 |
common lymphoid progenitor | 9.87e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.68e-10 | 98 |
blood island | 1.68e-10 | 98 |
hemolymphoid system | 2.03e-09 | 108 |
blood | 1.61e-07 | 15 |
haemolymphatic fluid | 1.61e-07 | 15 |
organism substance | 1.61e-07 | 15 |
bone marrow | 7.90e-07 | 76 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.