FFCP PHASE1:Hg19::chr10:91939935..91939941,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C679|description=CAGE_peak_at_chr10:91939935..91939941,+|id=chr10:91939935..91939941,+|ontology_enrichment_celltype=CL:0002195!3.99e-41!2;CL:0002571!3.99e-41!2;CL:0000594!2.72e-27!3;CL:0002574!9.43e-21!1;CL:0000188!1.85e-20!9;CL:0000064!6.34e-08!3;CL:0005012!6.34e-08!3;CL:0000067!6.34e-08!3;CL:0002304!6.34e-08!3;CL:0002590!6.78e-08!3|ontology_enrichment_celltype_v019=CL:0002195;3.29e-195;2!CL:0002571;3.29e-195;2!CL:0000723;8.24e-08;61!CL:0000048;8.24e-08;58|ontology_enrichment_celltype_v019_2=CL:0002195,3.29e-195,2;CL:0002571,3.29e-195,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002200!3.76e-08!11;UBERON:0006876!3.76e-08!11;UBERON:0001778!6.34e-08!3;UBERON:0001775!6.34e-08!3|ontology_enrichment_uberon_v019=UBERON:0002107;5.37e-22;19!UBERON:0006925;5.37e-22;19!UBERON:0002423;4.64e-17;25!UBERON:0002368;1.90e-14;33!UBERON:0002365;1.84e-13;31!UBERON:0002330;1.84e-13;31!UBERON:0000949;1.70e-11;43!UBERON:0005172;3.82e-10;52!UBERON:0005173;3.82e-10;52!UBERON:0002530;3.68e-09;57!UBERON:0002417;8.24e-08;58!UBERON:0000916;8.24e-08;58|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.37e-22,19;UBERON:0006925,5.37e-22,19;UBERON:0008836,5.37e-22,19;UBERON:0008835,3.41e-19,22;UBERON:0003894,3.41e-19,22;UBERON:0009854,2.02e-18,23;UBERON:0007499,4.64e-17,25;UBERON:0009497,4.64e-17,25;UBERON:0000015,4.64e-17,25;UBERON:0002423,4.64e-17,25;UBERON:0006235,4.64e-17,25;UBERON:0004161,4.64e-17,25;UBERON:0009856,1.86e-16,26;UBERON:0002365,5.04e-14,31;UBERON:0002330,5.04e-14,31;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0003929,1.34e-08,54;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002530,5.66e-08,59;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85955987316295,0,0,0,2.48774364119782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0.966782203814463,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:91939935..91939941,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C679 | |||
|description=CAGE_peak_at_chr10:91939935..91939941,+ | |||
|id=chr10:91939935..91939941,+ | |||
|ontology_enrichment_celltype=CL:0002195!3.99e-41!2;CL:0002571!3.99e-41!2;CL:0000594!2.72e-27!3;CL:0002574!9.43e-21!1;CL:0000188!1.85e-20!9;CL:0000064!6.34e-08!3;CL:0005012!6.34e-08!3;CL:0000067!6.34e-08!3;CL:0002304!6.34e-08!3;CL:0002590!6.78e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002195;3.29e-195;2!CL:0002571;3.29e-195;2!CL:0000723;8.24e-08;61!CL:0000048;8.24e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,3.29e-195,2;CL:0002571,3.29e-195,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!3.76e-08!11;UBERON:0006876!3.76e-08!11;UBERON:0001778!6.34e-08!3;UBERON:0001775!6.34e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.37e-22;19!UBERON:0006925;5.37e-22;19!UBERON:0002423;4.64e-17;25!UBERON:0002368;1.90e-14;33!UBERON:0002365;1.84e-13;31!UBERON:0002330;1.84e-13;31!UBERON:0000949;1.70e-11;43!UBERON:0005172;3.82e-10;52!UBERON:0005173;3.82e-10;52!UBERON:0002530;3.68e-09;57!UBERON:0002417;8.24e-08;58!UBERON:0000916;8.24e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.37e-22,19;UBERON:0006925,5.37e-22,19;UBERON:0008836,5.37e-22,19;UBERON:0008835,3.41e-19,22;UBERON:0003894,3.41e-19,22;UBERON:0009854,2.02e-18,23;UBERON:0007499,4.64e-17,25;UBERON:0009497,4.64e-17,25;UBERON:0000015,4.64e-17,25;UBERON:0002423,4.64e-17,25;UBERON:0006235,4.64e-17,25;UBERON:0004161,4.64e-17,25;UBERON:0009856,1.86e-16,26;UBERON:0002365,5.04e-14,31;UBERON:0002330,5.04e-14,31;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0003929,1.34e-08,54;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002530,5.66e-08,59;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85955987316295,0,0,0,2.48774364119782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0.966782203814463,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:91939935..91939941,+ | |||
}} |
Revision as of 14:57, 10 September 2013
Short description: | p@chr10:91939935..91939941, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:91939935..91939941, + |
Coexpression cluster: | C679_Mesenchymal_Smooth_Cardiac_Hair_Fibroblast_Mesothelial_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 3.29e-195 | 2 |
hepatic mesenchymal stem cell | 3.29e-195 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 5.37e-22 | 19 |
digestive gland | 5.37e-22 | 19 |
liver bud | 5.37e-22 | 19 |
hepatic diverticulum | 3.41e-19 | 22 |
liver primordium | 3.41e-19 | 22 |
digestive tract diverticulum | 2.02e-18 | 23 |
epithelial sac | 4.64e-17 | 25 |
epithelium of foregut-midgut junction | 4.64e-17 | 25 |
anatomical boundary | 4.64e-17 | 25 |
hepatobiliary system | 4.64e-17 | 25 |
foregut-midgut junction | 4.64e-17 | 25 |
septum transversum | 4.64e-17 | 25 |
sac | 1.86e-16 | 26 |
exocrine gland | 5.04e-14 | 31 |
exocrine system | 5.04e-14 | 31 |
endocrine gland | 1.42e-12 | 35 |
endocrine system | 4.55e-10 | 45 |
gut epithelium | 1.34e-08 | 54 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
gland | 5.66e-08 | 59 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.