FFCP PHASE1:Hg19::chr10:105836085..105836093,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C640|description=CAGE_peak_at_chr10:105836085..105836093,-|id=chr10:105836085..105836093,-|ontology_enrichment_celltype=CL:0002076!1.88e-22!43;CL:0000223!4.01e-15!59;CL:0002251!4.19e-15!21;CL:0000066!1.84e-12!254;CL:0002159!2.58e-12!13;CL:0000622!3.83e-12!5;CL:0002541!7.30e-12!3;CL:0002621!8.74e-12!3;CL:0000154!4.05e-10!6;CL:0002368!3.03e-09!13;CL:0000244!6.88e-09!4;CL:0000731!6.88e-09!4;CL:0002327!2.05e-08!4;CL:0000317!4.22e-08!2;CL:1000448!4.22e-08!2;CL:0002308!4.22e-08!2;CL:0002140!4.22e-08!2;CL:0002537!2.97e-07!5;CL:0000362!3.13e-07!8;CL:0000150!9.84e-07!9|ontology_enrichment_celltype_v019=CL:0000622;8.40e-20;5!CL:0000154;1.31e-16;6!CL:0002623;2.02e-15;3!CL:0002541;2.17e-15;3!CL:0002621;8.66e-15;3!CL:0002076;4.39e-14;42!CL:0002251;4.18e-13;20!CL:0002336;1.01e-11;1!CL:0002261;1.01e-11;1!CL:0002170;1.01e-11;1!CL:0000244;2.49e-11;4!CL:0000731;2.49e-11;4!CL:0000150;2.88e-11;9!CL:0002537;1.39e-09;5!CL:0000349;2.55e-09;19!CL:0000240;7.58e-08;6!CL:0000311;7.58e-08;6!CL:0000079;7.58e-08;6!CL:0000237;7.58e-08;6|ontology_enrichment_celltype_v019_2=CL:0000622,1.16e-19,5;CL:0000154,1.71e-16,6;CL:0002541,1.95e-15,3;CL:0002623,2.26e-15,3;CL:0002076,4.10e-15,42;CL:0002621,5.68e-15,3;CL:0002251,4.29e-13,20;CL:0002336,1.81e-11,1;CL:0002261,1.81e-11,1;CL:0002170,1.81e-11,1;CL:0000244,2.37e-11,4;CL:0000731,2.37e-11,4;CL:0000150,3.43e-11,9;CL:0000223,1.08e-10,58;CL:0002537,1.42e-09,5;CL:0000349,2.49e-09,19;CL:0000240,9.99e-08,6;CL:0000311,9.99e-08,6;CL:0000079,9.99e-08,6;CL:0000237,9.99e-08,6;CL:0000036,9.99e-08,6;CL:0000357,9.99e-08,6;CL:0000114,9.99e-08,6|ontology_enrichment_development_v019=CL:0000357;7.58e-08;6!CL:0000114;7.58e-08;6|ontology_enrichment_disease=DOID:1749!4.10e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!2.47e-19!14;UBERON:0000158!2.47e-19!14;UBERON:0003124!7.23e-18!7;UBERON:0000166!3.75e-12!21;UBERON:0000161!5.50e-12!35;UBERON:0000476!7.30e-12!3;UBERON:0000920!7.30e-12!3;UBERON:0001949!8.74e-12!3;UBERON:0004119!6.10e-11!169;UBERON:0000925!6.10e-11!169;UBERON:0006595!6.10e-11!169;UBERON:0000165!8.51e-11!28;UBERON:0000930!8.51e-11!28;UBERON:0000478!1.53e-10!24;UBERON:0003102!8.62e-09!95;UBERON:0001911!2.05e-08!4;UBERON:0005333!2.05e-08!4;UBERON:0008425!2.05e-08!4;UBERON:0005311!2.05e-08!4;UBERON:0001987!3.08e-08!4;UBERON:0004340!3.08e-08!4;UBERON:0002419!4.22e-08!2;UBERON:0007771!4.22e-08!2;UBERON:0003297!4.22e-08!2;UBERON:0001821!4.22e-08!2;UBERON:0003487!4.22e-08!2;UBERON:0001820!4.22e-08!2;UBERON:0005089!4.22e-08!2;UBERON:0005088!4.22e-08!2;UBERON:0001444!5.40e-08!48;UBERON:0001004!1.47e-07!72;UBERON:0004923!1.52e-07!57;UBERON:0000365!3.51e-07!5;UBERON:0000076!5.65e-07!8;UBERON:0003729!8.48e-07!5|ontology_enrichment_uberon_v019=UBERON:0005631;1.63e-17;10!UBERON:0000158;1.63e-17;10!UBERON:0003124;2.17e-15;3!UBERON:0000920;2.17e-15;3!UBERON:0001949;8.66e-15;3!UBERON:0000486;4.56e-14;12!UBERON:0007029;1.01e-11;1!UBERON:0000165;2.48e-09;28!UBERON:0000365;3.04e-09;5!UBERON:0000161;3.71e-09;19!UBERON:0000166;3.71e-09;19!UBERON:0001044;3.70e-08;6!UBERON:0003293;3.70e-08;6!UBERON:0003294;3.70e-08;6!UBERON:0010047;3.70e-08;6!UBERON:0003408;3.70e-08;6!UBERON:0000167;3.70e-08;6!UBERON:0010371;5.46e-08;31!UBERON:0005910;7.58e-08;6!UBERON:0003729;9.54e-08;13!UBERON:0000478;2.07e-07;24!UBERON:0000305;4.39e-07;7!UBERON:0004923;4.64e-07;55!UBERON:0003929;7.63e-07;7!UBERON:0001003;8.90e-07;15!UBERON:0007376;8.90e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.95e-15,3;UBERON:0001949,5.68e-15,3;UBERON:0005631,1.36e-12,14;UBERON:0000158,1.36e-12,14;UBERON:0007029,6.97e-12,1;UBERON:0000365,2.91e-09,5;UBERON:0000165,5.36e-09,29;UBERON:0000930,5.36e-09,29;UBERON:0001044,3.90e-08,6;UBERON:0003293,3.90e-08,6;UBERON:0003294,3.90e-08,6;UBERON:0010047,3.90e-08,6;UBERON:0000167,3.90e-08,6;UBERON:0000166,5.76e-08,22;UBERON:0005910,7.33e-08,6;UBERON:0003729,9.44e-08,13;UBERON:0000478,2.04e-07,24;UBERON:0003102,2.09e-07,99;UBERON:0000161,2.65e-07,36;UBERON:0004923,3.35e-07,66;UBERON:0003124,4.08e-07,7;UBERON:0000305,4.46e-07,7;UBERON:0001003,9.36e-07,15;UBERON:0007376,9.36e-07,15;UBERON:0007383,9.36e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,1.36373060295417,0.860413786167011,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C640 | |||
|description=CAGE_peak_at_chr10:105836085..105836093,- | |||
|id=chr10:105836085..105836093,- | |||
|ontology_enrichment_celltype=CL:0002076!1.88e-22!43;CL:0000223!4.01e-15!59;CL:0002251!4.19e-15!21;CL:0000066!1.84e-12!254;CL:0002159!2.58e-12!13;CL:0000622!3.83e-12!5;CL:0002541!7.30e-12!3;CL:0002621!8.74e-12!3;CL:0000154!4.05e-10!6;CL:0002368!3.03e-09!13;CL:0000244!6.88e-09!4;CL:0000731!6.88e-09!4;CL:0002327!2.05e-08!4;CL:0000317!4.22e-08!2;CL:1000448!4.22e-08!2;CL:0002308!4.22e-08!2;CL:0002140!4.22e-08!2;CL:0002537!2.97e-07!5;CL:0000362!3.13e-07!8;CL:0000150!9.84e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000622;8.40e-20;5!CL:0000154;1.31e-16;6!CL:0002623;2.02e-15;3!CL:0002541;2.17e-15;3!CL:0002621;8.66e-15;3!CL:0002076;4.39e-14;42!CL:0002251;4.18e-13;20!CL:0002336;1.01e-11;1!CL:0002261;1.01e-11;1!CL:0002170;1.01e-11;1!CL:0000244;2.49e-11;4!CL:0000731;2.49e-11;4!CL:0000150;2.88e-11;9!CL:0002537;1.39e-09;5!CL:0000349;2.55e-09;19!CL:0000240;7.58e-08;6!CL:0000311;7.58e-08;6!CL:0000079;7.58e-08;6!CL:0000237;7.58e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.16e-19,5;CL:0000154,1.71e-16,6;CL:0002541,1.95e-15,3;CL:0002623,2.26e-15,3;CL:0002076,4.10e-15,42;CL:0002621,5.68e-15,3;CL:0002251,4.29e-13,20;CL:0002336,1.81e-11,1;CL:0002261,1.81e-11,1;CL:0002170,1.81e-11,1;CL:0000244,2.37e-11,4;CL:0000731,2.37e-11,4;CL:0000150,3.43e-11,9;CL:0000223,1.08e-10,58;CL:0002537,1.42e-09,5;CL:0000349,2.49e-09,19;CL:0000240,9.99e-08,6;CL:0000311,9.99e-08,6;CL:0000079,9.99e-08,6;CL:0000237,9.99e-08,6;CL:0000036,9.99e-08,6;CL:0000357,9.99e-08,6;CL:0000114,9.99e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;7.58e-08;6!CL:0000114;7.58e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!4.10e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.47e-19!14;UBERON:0000158!2.47e-19!14;UBERON:0003124!7.23e-18!7;UBERON:0000166!3.75e-12!21;UBERON:0000161!5.50e-12!35;UBERON:0000476!7.30e-12!3;UBERON:0000920!7.30e-12!3;UBERON:0001949!8.74e-12!3;UBERON:0004119!6.10e-11!169;UBERON:0000925!6.10e-11!169;UBERON:0006595!6.10e-11!169;UBERON:0000165!8.51e-11!28;UBERON:0000930!8.51e-11!28;UBERON:0000478!1.53e-10!24;UBERON:0003102!8.62e-09!95;UBERON:0001911!2.05e-08!4;UBERON:0005333!2.05e-08!4;UBERON:0008425!2.05e-08!4;UBERON:0005311!2.05e-08!4;UBERON:0001987!3.08e-08!4;UBERON:0004340!3.08e-08!4;UBERON:0002419!4.22e-08!2;UBERON:0007771!4.22e-08!2;UBERON:0003297!4.22e-08!2;UBERON:0001821!4.22e-08!2;UBERON:0003487!4.22e-08!2;UBERON:0001820!4.22e-08!2;UBERON:0005089!4.22e-08!2;UBERON:0005088!4.22e-08!2;UBERON:0001444!5.40e-08!48;UBERON:0001004!1.47e-07!72;UBERON:0004923!1.52e-07!57;UBERON:0000365!3.51e-07!5;UBERON:0000076!5.65e-07!8;UBERON:0003729!8.48e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.63e-17;10!UBERON:0000158;1.63e-17;10!UBERON:0003124;2.17e-15;3!UBERON:0000920;2.17e-15;3!UBERON:0001949;8.66e-15;3!UBERON:0000486;4.56e-14;12!UBERON:0007029;1.01e-11;1!UBERON:0000165;2.48e-09;28!UBERON:0000365;3.04e-09;5!UBERON:0000161;3.71e-09;19!UBERON:0000166;3.71e-09;19!UBERON:0001044;3.70e-08;6!UBERON:0003293;3.70e-08;6!UBERON:0003294;3.70e-08;6!UBERON:0010047;3.70e-08;6!UBERON:0003408;3.70e-08;6!UBERON:0000167;3.70e-08;6!UBERON:0010371;5.46e-08;31!UBERON:0005910;7.58e-08;6!UBERON:0003729;9.54e-08;13!UBERON:0000478;2.07e-07;24!UBERON:0000305;4.39e-07;7!UBERON:0004923;4.64e-07;55!UBERON:0003929;7.63e-07;7!UBERON:0001003;8.90e-07;15!UBERON:0007376;8.90e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.95e-15,3;UBERON:0001949,5.68e-15,3;UBERON:0005631,1.36e-12,14;UBERON:0000158,1.36e-12,14;UBERON:0007029,6.97e-12,1;UBERON:0000365,2.91e-09,5;UBERON:0000165,5.36e-09,29;UBERON:0000930,5.36e-09,29;UBERON:0001044,3.90e-08,6;UBERON:0003293,3.90e-08,6;UBERON:0003294,3.90e-08,6;UBERON:0010047,3.90e-08,6;UBERON:0000167,3.90e-08,6;UBERON:0000166,5.76e-08,22;UBERON:0005910,7.33e-08,6;UBERON:0003729,9.44e-08,13;UBERON:0000478,2.04e-07,24;UBERON:0003102,2.09e-07,99;UBERON:0000161,2.65e-07,36;UBERON:0004923,3.35e-07,66;UBERON:0003124,4.08e-07,7;UBERON:0000305,4.46e-07,7;UBERON:0001003,9.36e-07,15;UBERON:0007376,9.36e-07,15;UBERON:0007383,9.36e-07,15 | |||
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|short_description=p@chr10:105836085..105836093,- | |||
}} |
Revision as of 11:34, 10 September 2013
Short description: | p@chr10:105836085..105836093, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:105836085..105836093, - |
Coexpression cluster: | C640_amniotic_salivary_chorionic_Keratinocyte_Urothelial_Prostate_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.16e-19 | 5 |
protein secreting cell | 1.71e-16 | 6 |
chorionic membrane mesenchymal stem cell | 1.95e-15 | 3 |
acinar cell of salivary gland | 2.26e-15 | 3 |
endo-epithelial cell | 4.10e-15 | 42 |
gingival epithelial cell | 5.68e-15 | 3 |
epithelial cell of alimentary canal | 4.29e-13 | 20 |
buccal mucosa cell | 1.81e-11 | 1 |
endothelial cell of viscerocranial mucosa | 1.81e-11 | 1 |
keratinized cell of the oral mucosa | 1.81e-11 | 1 |
transitional epithelial cell | 2.37e-11 | 4 |
urothelial cell | 2.37e-11 | 4 |
glandular epithelial cell | 3.43e-11 | 9 |
endodermal cell | 1.08e-10 | 58 |
amnion mesenchymal stem cell | 1.42e-09 | 5 |
extraembryonic cell | 2.49e-09 | 19 |
stratified squamous epithelial cell | 9.99e-08 | 6 |
keratin accumulating cell | 9.99e-08 | 6 |
stratified epithelial cell | 9.99e-08 | 6 |
keratinizing barrier epithelial cell | 9.99e-08 | 6 |
epithelial fate stem cell | 9.99e-08 | 6 |
stratified epithelial stem cell | 9.99e-08 | 6 |
surface ectodermal cell | 9.99e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.95e-15 | 3 |
gingival epithelium | 5.68e-15 | 3 |
extraembryonic membrane | 1.36e-12 | 14 |
membranous layer | 1.36e-12 | 14 |
surface | 6.97e-12 | 1 |
urothelium | 2.91e-09 | 5 |
mouth | 5.36e-09 | 29 |
stomodeum | 5.36e-09 | 29 |
saliva-secreting gland | 3.90e-08 | 6 |
gland of oral region | 3.90e-08 | 6 |
gland of foregut | 3.90e-08 | 6 |
oral gland | 3.90e-08 | 6 |
oral cavity | 3.90e-08 | 6 |
oral opening | 5.76e-08 | 22 |
transitional epithelium | 7.33e-08 | 6 |
mouth mucosa | 9.44e-08 | 13 |
extraembryonic structure | 2.04e-07 | 24 |
surface structure | 2.09e-07 | 99 |
orifice | 2.65e-07 | 36 |
organ component layer | 3.35e-07 | 66 |
chorion | 4.08e-07 | 7 |
amnion | 4.46e-07 | 7 |
skin epidermis | 9.36e-07 | 15 |
outer epithelium | 9.36e-07 | 15 |
enveloping layer of ectoderm | 9.36e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.