FFCP PHASE1:Hg19::chr10:105845923..105845943,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1308|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2194|TSSclassifier=N|UniProt=Q9UMD9|association_with_transcript=-163bp_to_ENST00000353479,ENST00000369733_5end|description=CAGE_peak_6_at_COL17A1_5end|id=chr10:105845923..105845943,-|ontology_enrichment_celltype=CL:0000066!1.97e-22!254;CL:0002076!4.21e-22!43;CL:0000223!8.11e-19!59;CL:0002159!4.35e-13!13;CL:0002251!4.67e-13!21;CL:0000622!2.09e-12!5;CL:0000244!7.88e-11!4;CL:0000731!7.88e-11!4;CL:0002368!2.18e-10!13;CL:0000154!2.96e-10!6;CL:0002541!2.87e-08!3;CL:0002623!3.56e-08!3;CL:0000349!6.72e-08!3;CL:0002577!6.72e-08!3;CL:0000063!1.30e-07!578;CL:0002621!1.44e-07!3;CL:0000362!4.11e-07!8|ontology_enrichment_celltype_v019=CL:0000244;3.99e-21;4!CL:0000731;3.99e-21;4!CL:0000349;1.73e-20;19!CL:0000622;2.31e-16;5!CL:0002159;2.88e-16;14!CL:0000154;1.16e-13;6!CL:0002536;1.88e-11;2!CL:0000317;1.12e-10;2!CL:1000448;1.12e-10;2!CL:0002308;1.12e-10;2!CL:0002140;1.12e-10;2!CL:0002537;9.52e-10;5!CL:0000150;3.82e-09;9!CL:0000362;8.32e-09;9!CL:0002541;3.06e-08;3!CL:0000240;5.96e-08;6!CL:0000311;5.96e-08;6!CL:0000079;5.96e-08;6!CL:0000237;5.96e-08;6!CL:0002623;6.24e-08;3!CL:0002166;1.21e-07;3!CL:0002577;1.43e-07;3!CL:0002077;3.35e-07;34|ontology_enrichment_celltype_v019_2=CL:0000244,3.61e-21,4;CL:0000731,3.61e-21,4;CL:0000349,1.64e-20,19;CL:0000622,2.27e-16,5;CL:0002159,4.49e-16,14;CL:0000066,8.84e-14,253;CL:0000154,1.14e-13,6;CL:0002536,1.70e-11,2;CL:0000317,1.01e-10,2;CL:1000448,1.01e-10,2;CL:0002308,1.01e-10,2;CL:0002140,1.01e-10,2;CL:0002537,1.06e-09,5;CL:0000150,3.78e-09,9;CL:0000362,1.12e-08,9;CL:0002541,3.07e-08,3;CL:0002623,6.57e-08,3;CL:0002077,6.67e-08,34;CL:0000240,9.11e-08,6;CL:0000311,9.11e-08,6;CL:0000079,9.11e-08,6;CL:0000237,9.11e-08,6;CL:0000036,9.11e-08,6;CL:0000357,9.11e-08,6;CL:0000114,9.11e-08,6;CL:0002577,1.25e-07,3;CL:0002166,1.34e-07,3|ontology_enrichment_development_v019=CL:0000357;5.96e-08;6!CL:0000114;5.96e-08;6|ontology_enrichment_disease=DOID:1749!9.66e-12!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!2.28e-23!14;UBERON:0000158!2.28e-23!14;UBERON:0003124!1.33e-16!7;UBERON:0000365!9.81e-13!5;UBERON:0000478!2.58e-12!24;UBERON:0004119!6.24e-11!169;UBERON:0000925!6.24e-11!169;UBERON:0006595!6.24e-11!169;UBERON:0005910!1.59e-10!6;UBERON:0001987!5.03e-10!4;UBERON:0004340!5.03e-10!4;UBERON:0000305!4.64e-09!7;UBERON:0000476!2.87e-08!3;UBERON:0000920!2.87e-08!3;UBERON:0004923!7.12e-08!57;UBERON:0004871!7.36e-08!8;UBERON:0001949!1.44e-07!3;UBERON:0001004!9.64e-07!72|ontology_enrichment_uberon_v019=UBERON:0005631;8.87e-25;10!UBERON:0000158;8.87e-25;10!UBERON:0000478;1.61e-19;24!UBERON:0000305;3.11e-18;7!UBERON:0000365;6.20e-17;5!UBERON:0005910;3.91e-14;6!UBERON:0001987;1.08e-11;4!UBERON:0002419;1.12e-10;2!UBERON:0007771;1.12e-10;2!UBERON:0003297;1.12e-10;2!UBERON:0001821;1.12e-10;2!UBERON:0003487;1.12e-10;2!UBERON:0001820;1.12e-10;2!UBERON:0000486;1.58e-10;12!UBERON:0003124;3.06e-08;3!UBERON:0000920;3.06e-08;3!UBERON:0004913;8.57e-07;1!UBERON:0003703;8.57e-07;1!UBERON:0001174;8.57e-07;1!UBERON:0004914;8.57e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.34e-35,14;UBERON:0000158,7.34e-35,14;UBERON:0000478,1.49e-19,24;UBERON:0003124,2.65e-18,7;UBERON:0000305,3.29e-18,7;UBERON:0000365,5.73e-17,5;UBERON:0004871,6.61e-16,8;UBERON:0005910,3.66e-14,6;UBERON:0001987,8.83e-12,4;UBERON:0004340,8.83e-12,4;UBERON:0002419,1.01e-10,2;UBERON:0007771,1.01e-10,2;UBERON:0003297,1.01e-10,2;UBERON:0001821,1.01e-10,2;UBERON:0003487,1.01e-10,2;UBERON:0001820,1.01e-10,2;UBERON:0005089,1.01e-10,2;UBERON:0005088,1.01e-10,2;UBERON:0004923,1.08e-08,66;UBERON:0000920,3.07e-08,3;UBERON:0004913,8.81e-07,1;UBERON:0003703,8.81e-07,1;UBERON:0001174,8.81e-07,1;UBERON:0004914,8.81e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,5.46103430325431,2.37390280405608,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0.290209238628584,1.13477044938228,0,0,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,1.00528972411631,2.22212268380471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69560682037491,1.27597587518148,2.50763863567975,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42502057157008,1.664354395104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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1308 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2194 | |||
|TSSclassifier=N | |||
|UniProt=Q9UMD9 | |||
|association_with_transcript=-163bp_to_ENST00000353479,ENST00000369733_5end | |||
|description=CAGE_peak_6_at_COL17A1_5end | |||
|id=chr10:105845923..105845943,- | |||
|ontology_enrichment_celltype=CL:0000066!1.97e-22!254;CL:0002076!4.21e-22!43;CL:0000223!8.11e-19!59;CL:0002159!4.35e-13!13;CL:0002251!4.67e-13!21;CL:0000622!2.09e-12!5;CL:0000244!7.88e-11!4;CL:0000731!7.88e-11!4;CL:0002368!2.18e-10!13;CL:0000154!2.96e-10!6;CL:0002541!2.87e-08!3;CL:0002623!3.56e-08!3;CL:0000349!6.72e-08!3;CL:0002577!6.72e-08!3;CL:0000063!1.30e-07!578;CL:0002621!1.44e-07!3;CL:0000362!4.11e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000244;3.99e-21;4!CL:0000731;3.99e-21;4!CL:0000349;1.73e-20;19!CL:0000622;2.31e-16;5!CL:0002159;2.88e-16;14!CL:0000154;1.16e-13;6!CL:0002536;1.88e-11;2!CL:0000317;1.12e-10;2!CL:1000448;1.12e-10;2!CL:0002308;1.12e-10;2!CL:0002140;1.12e-10;2!CL:0002537;9.52e-10;5!CL:0000150;3.82e-09;9!CL:0000362;8.32e-09;9!CL:0002541;3.06e-08;3!CL:0000240;5.96e-08;6!CL:0000311;5.96e-08;6!CL:0000079;5.96e-08;6!CL:0000237;5.96e-08;6!CL:0002623;6.24e-08;3!CL:0002166;1.21e-07;3!CL:0002577;1.43e-07;3!CL:0002077;3.35e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.61e-21,4;CL:0000731,3.61e-21,4;CL:0000349,1.64e-20,19;CL:0000622,2.27e-16,5;CL:0002159,4.49e-16,14;CL:0000066,8.84e-14,253;CL:0000154,1.14e-13,6;CL:0002536,1.70e-11,2;CL:0000317,1.01e-10,2;CL:1000448,1.01e-10,2;CL:0002308,1.01e-10,2;CL:0002140,1.01e-10,2;CL:0002537,1.06e-09,5;CL:0000150,3.78e-09,9;CL:0000362,1.12e-08,9;CL:0002541,3.07e-08,3;CL:0002623,6.57e-08,3;CL:0002077,6.67e-08,34;CL:0000240,9.11e-08,6;CL:0000311,9.11e-08,6;CL:0000079,9.11e-08,6;CL:0000237,9.11e-08,6;CL:0000036,9.11e-08,6;CL:0000357,9.11e-08,6;CL:0000114,9.11e-08,6;CL:0002577,1.25e-07,3;CL:0002166,1.34e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;5.96e-08;6!CL:0000114;5.96e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!9.66e-12!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.28e-23!14;UBERON:0000158!2.28e-23!14;UBERON:0003124!1.33e-16!7;UBERON:0000365!9.81e-13!5;UBERON:0000478!2.58e-12!24;UBERON:0004119!6.24e-11!169;UBERON:0000925!6.24e-11!169;UBERON:0006595!6.24e-11!169;UBERON:0005910!1.59e-10!6;UBERON:0001987!5.03e-10!4;UBERON:0004340!5.03e-10!4;UBERON:0000305!4.64e-09!7;UBERON:0000476!2.87e-08!3;UBERON:0000920!2.87e-08!3;UBERON:0004923!7.12e-08!57;UBERON:0004871!7.36e-08!8;UBERON:0001949!1.44e-07!3;UBERON:0001004!9.64e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;8.87e-25;10!UBERON:0000158;8.87e-25;10!UBERON:0000478;1.61e-19;24!UBERON:0000305;3.11e-18;7!UBERON:0000365;6.20e-17;5!UBERON:0005910;3.91e-14;6!UBERON:0001987;1.08e-11;4!UBERON:0002419;1.12e-10;2!UBERON:0007771;1.12e-10;2!UBERON:0003297;1.12e-10;2!UBERON:0001821;1.12e-10;2!UBERON:0003487;1.12e-10;2!UBERON:0001820;1.12e-10;2!UBERON:0000486;1.58e-10;12!UBERON:0003124;3.06e-08;3!UBERON:0000920;3.06e-08;3!UBERON:0004913;8.57e-07;1!UBERON:0003703;8.57e-07;1!UBERON:0001174;8.57e-07;1!UBERON:0004914;8.57e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.34e-35,14;UBERON:0000158,7.34e-35,14;UBERON:0000478,1.49e-19,24;UBERON:0003124,2.65e-18,7;UBERON:0000305,3.29e-18,7;UBERON:0000365,5.73e-17,5;UBERON:0004871,6.61e-16,8;UBERON:0005910,3.66e-14,6;UBERON:0001987,8.83e-12,4;UBERON:0004340,8.83e-12,4;UBERON:0002419,1.01e-10,2;UBERON:0007771,1.01e-10,2;UBERON:0003297,1.01e-10,2;UBERON:0001821,1.01e-10,2;UBERON:0003487,1.01e-10,2;UBERON:0001820,1.01e-10,2;UBERON:0005089,1.01e-10,2;UBERON:0005088,1.01e-10,2;UBERON:0004923,1.08e-08,66;UBERON:0000920,3.07e-08,3;UBERON:0004913,8.81e-07,1;UBERON:0003703,8.81e-07,1;UBERON:0001174,8.81e-07,1;UBERON:0004914,8.81e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,5.46103430325431,2.37390280405608,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0.290209238628584,1.13477044938228,0,0,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,1.00528972411631,2.22212268380471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69560682037491,1.27597587518148,2.50763863567975,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42502057157008,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.828728900423067,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,1.72279661398852,1.30012049207304,0,0,0,0,0,0,0,0,0,1.81813406897076,1.72971060628596,0.638063562472921,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63577591633371,0.670302275535787,0,0.188287601553558,5.16606447205476,5.05414427002877,1.7737206141467,5.05391480455311,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,5.25237866422918,1.18785872333055,2.45728561679386,0,0,0,0,0,0,0,0,14.6244215978081,0,0,3.32512899245109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0.569710279235006,0,0.0897576444097721,0,7.97502899329799,0.549585560411174,19.7222867126895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,3.91766429611812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16082196982225,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0,0,5.37362552494447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.419638523158333,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0.462102664601353,0,0,0,0,0,0,0,0,9.31493343167385,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,1.5966426629275,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31545862660859,4.0972434502548,0.691259661814092,0,0,0,0,0,0.62041277132864,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,9.52816153632368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@COL17A1 | |||
}} |
Revision as of 11:34, 10 September 2013
Short description: | p6@COL17A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_COL17A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -163bp_to_ENST00000353479, ENST00000369733_5end |
EntrezGene: | COL17A1 |
HGNC: | 2194 |
UniProt: | Q9UMD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.61e-21 | 4 |
urothelial cell | 3.61e-21 | 4 |
extraembryonic cell | 1.64e-20 | 19 |
acinar cell | 2.27e-16 | 5 |
general ecto-epithelial cell | 4.49e-16 | 14 |
epithelial cell | 8.84e-14 | 253 |
protein secreting cell | 1.14e-13 | 6 |
amniotic epithelial cell | 1.70e-11 | 2 |
sebum secreting cell | 1.01e-10 | 2 |
epithelial cell of sweat gland | 1.01e-10 | 2 |
epithelial cell of skin gland | 1.01e-10 | 2 |
acinar cell of sebaceous gland | 1.01e-10 | 2 |
amnion mesenchymal stem cell | 1.06e-09 | 5 |
glandular epithelial cell | 3.78e-09 | 9 |
epidermal cell | 1.12e-08 | 9 |
chorionic membrane mesenchymal stem cell | 3.07e-08 | 3 |
acinar cell of salivary gland | 6.57e-08 | 3 |
ecto-epithelial cell | 6.67e-08 | 34 |
stratified squamous epithelial cell | 9.11e-08 | 6 |
keratin accumulating cell | 9.11e-08 | 6 |
stratified epithelial cell | 9.11e-08 | 6 |
keratinizing barrier epithelial cell | 9.11e-08 | 6 |
epithelial fate stem cell | 9.11e-08 | 6 |
stratified epithelial stem cell | 9.11e-08 | 6 |
surface ectodermal cell | 9.11e-08 | 6 |
placental epithelial cell | 1.25e-07 | 3 |
epithelial cell of Malassez | 1.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.34e-35 | 14 |
membranous layer | 7.34e-35 | 14 |
extraembryonic structure | 1.49e-19 | 24 |
chorion | 2.65e-18 | 7 |
amnion | 3.29e-18 | 7 |
urothelium | 5.73e-17 | 5 |
somatic layer of lateral plate mesoderm | 6.61e-16 | 8 |
transitional epithelium | 3.66e-14 | 6 |
placenta | 8.83e-12 | 4 |
allantois | 8.83e-12 | 4 |
skin gland | 1.01e-10 | 2 |
epidermis gland | 1.01e-10 | 2 |
gland of integumental system | 1.01e-10 | 2 |
sebaceous gland | 1.01e-10 | 2 |
skin sebaceous gland | 1.01e-10 | 2 |
sweat gland | 1.01e-10 | 2 |
sweat gland placode | 1.01e-10 | 2 |
sebaceous gland placode | 1.01e-10 | 2 |
organ component layer | 1.08e-08 | 66 |
egg chorion | 3.07e-08 | 3 |
hepatopancreatic ampulla | 8.81e-07 | 1 |
extrahepatic bile duct | 8.81e-07 | 1 |
common bile duct | 8.81e-07 | 1 |
duodenal papilla | 8.81e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.