FFCP PHASE1:Hg19::chr11:2150745..2150785,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-240bp_to_BC127839_5end|coexpression_cluster_id=C172|description=CAGE_peak_1_at_BC127839_5end|id=chr11:2150745..2150785,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;2.75e-26;19!CL:0002536;1.45e-11;2!CL:0002575;3.78e-11;2!CL:0002537;2.38e-10;5!CL:0000182;2.81e-10;12!CL:0002541;2.76e-08;3!CL:0002577;6.45e-08;3!CL:0002564;2.19e-07;3|ontology_enrichment_celltype_v019_2=CL:0000349,2.54e-26,19;CL:0002536,1.45e-11,2;CL:0002575,2.44e-11,2;CL:0002537,2.38e-10,5;CL:0000182,2.81e-10,12;CL:0002541,2.76e-08,3;CL:0002577,5.73e-08,3;CL:0002564,3.14e-07,3|ontology_enrichment_development_v019=UBERON:0004161;4.61e-11;11!UBERON:0009497;2.52e-09;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.28e-17!14;UBERON:0000158!1.28e-17!14;UBERON:0000478!1.83e-12!24;UBERON:0003124!1.22e-09!7;UBERON:0000305!1.28e-09!7;UBERON:0003929!8.50e-09!54;UBERON:0005284!2.61e-08!5;UBERON:0004871!2.82e-08!8;UBERON:0002107!2.22e-07!19;UBERON:0006925!2.22e-07!19;UBERON:0008836!2.22e-07!19;UBERON:0005256!2.22e-07!143;UBERON:0004119!4.19e-07!169;UBERON:0000925!4.19e-07!169;UBERON:0006595!4.19e-07!169;UBERON:0000490!6.70e-07!138|ontology_enrichment_uberon_v019=UBERON:0000478;2.49e-29;24!UBERON:0005631;1.30e-25;10!UBERON:0000158;1.30e-25;10!UBERON:0000305;4.95e-19;7!UBERON:0001987;2.84e-12;4!UBERON:0002107;6.57e-09;19!UBERON:0006925;6.57e-09;19!UBERON:0003124;2.76e-08;3!UBERON:0000920;2.76e-08;3!UBERON:0002242;2.19e-07;3!UBERON:0002426;9.54e-07;1!UBERON:0003831;9.54e-07;1!UBERON:0003898;9.54e-07;1!UBERON:0004830;9.54e-07;1!UBERON:0003830;9.54e-07;1!UBERON:0005175;9.54e-07;1!UBERON:0001774;9.54e-07;1!UBERON:0001103;9.54e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.67e-36,14;UBERON:0000158,2.67e-36,14;UBERON:0000478,2.15e-29,24;UBERON:0000305,4.97e-19,7;UBERON:0003124,6.42e-19,7;UBERON:0004871,1.28e-16,8;UBERON:0001987,2.26e-12,4;UBERON:0004340,2.26e-12,4;UBERON:0002107,6.97e-09,19;UBERON:0006925,6.97e-09,19;UBERON:0008836,6.97e-09,19;UBERON:0000920,2.76e-08,3;UBERON:0008835,1.36e-07,22;UBERON:0003894,1.36e-07,22;UBERON:0004923,1.57e-07,66;UBERON:0009854,3.09e-07,23;UBERON:0002242,3.14e-07,3;UBERON:0003068,3.14e-07,3;UBERON:0002328,3.14e-07,3;UBERON:0004880,3.14e-07,3;UBERON:0002426,9.81e-07,1;UBERON:0003831,9.81e-07,1;UBERON:0003898,9.81e-07,1;UBERON:0004830,9.81e-07,1;UBERON:0003830,9.81e-07,1;UBERON:0005175,9.81e-07,1;UBERON:0001774,9.81e-07,1;UBERON:0001103,9.81e-07,1;UBERON:0010084,9.81e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,4.36882744260345,4.48403862988371,0.247532705920093,0.662794751455832,0,0,0,0,0,1.02000345622126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69716365721711,0.207322110030741,0,0,0,0,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,1.8448265781467,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0.87192013766656,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,5.42621605391443,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,1.00034104211935,1.35632511849868,1.03985430765404,0.892144943985809,0.473107245101804,0,0,0,0,0,0,0,1.95801157462741,5.83343820478455,0,0,0,2.72814814301633,0,6.95497674658265,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,2.41718899183244,0,0.0920809889358963,0.459257792658427,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.551346289938122,0,0,0.0852266274161009,0.979352392114111,0.165284915360978,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0,0,0.744316738719335,0.949138274156178,0.953150969619124,0,0.855877976067841,0,0,0.359744915166629,0,0,0,0,0,0.48763373908959,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,0,0,0,0,0,0,0,0.564862804660675,0.43050537267123,0,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.027268358983,7.42411702081597,11.3649459776716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.69169171316418,0,0,23.92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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-240bp_to_BC127839_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_1_at_BC127839_5end | |||
|id=chr11:2150745..2150785,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.75e-26;19!CL:0002536;1.45e-11;2!CL:0002575;3.78e-11;2!CL:0002537;2.38e-10;5!CL:0000182;2.81e-10;12!CL:0002541;2.76e-08;3!CL:0002577;6.45e-08;3!CL:0002564;2.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.54e-26,19;CL:0002536,1.45e-11,2;CL:0002575,2.44e-11,2;CL:0002537,2.38e-10,5;CL:0000182,2.81e-10,12;CL:0002541,2.76e-08,3;CL:0002577,5.73e-08,3;CL:0002564,3.14e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.61e-11;11!UBERON:0009497;2.52e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.28e-17!14;UBERON:0000158!1.28e-17!14;UBERON:0000478!1.83e-12!24;UBERON:0003124!1.22e-09!7;UBERON:0000305!1.28e-09!7;UBERON:0003929!8.50e-09!54;UBERON:0005284!2.61e-08!5;UBERON:0004871!2.82e-08!8;UBERON:0002107!2.22e-07!19;UBERON:0006925!2.22e-07!19;UBERON:0008836!2.22e-07!19;UBERON:0005256!2.22e-07!143;UBERON:0004119!4.19e-07!169;UBERON:0000925!4.19e-07!169;UBERON:0006595!4.19e-07!169;UBERON:0000490!6.70e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.49e-29;24!UBERON:0005631;1.30e-25;10!UBERON:0000158;1.30e-25;10!UBERON:0000305;4.95e-19;7!UBERON:0001987;2.84e-12;4!UBERON:0002107;6.57e-09;19!UBERON:0006925;6.57e-09;19!UBERON:0003124;2.76e-08;3!UBERON:0000920;2.76e-08;3!UBERON:0002242;2.19e-07;3!UBERON:0002426;9.54e-07;1!UBERON:0003831;9.54e-07;1!UBERON:0003898;9.54e-07;1!UBERON:0004830;9.54e-07;1!UBERON:0003830;9.54e-07;1!UBERON:0005175;9.54e-07;1!UBERON:0001774;9.54e-07;1!UBERON:0001103;9.54e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.67e-36,14;UBERON:0000158,2.67e-36,14;UBERON:0000478,2.15e-29,24;UBERON:0000305,4.97e-19,7;UBERON:0003124,6.42e-19,7;UBERON:0004871,1.28e-16,8;UBERON:0001987,2.26e-12,4;UBERON:0004340,2.26e-12,4;UBERON:0002107,6.97e-09,19;UBERON:0006925,6.97e-09,19;UBERON:0008836,6.97e-09,19;UBERON:0000920,2.76e-08,3;UBERON:0008835,1.36e-07,22;UBERON:0003894,1.36e-07,22;UBERON:0004923,1.57e-07,66;UBERON:0009854,3.09e-07,23;UBERON:0002242,3.14e-07,3;UBERON:0003068,3.14e-07,3;UBERON:0002328,3.14e-07,3;UBERON:0004880,3.14e-07,3;UBERON:0002426,9.81e-07,1;UBERON:0003831,9.81e-07,1;UBERON:0003898,9.81e-07,1;UBERON:0004830,9.81e-07,1;UBERON:0003830,9.81e-07,1;UBERON:0005175,9.81e-07,1;UBERON:0001774,9.81e-07,1;UBERON:0001103,9.81e-07,1;UBERON:0010084,9.81e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,4.36882744260345,4.48403862988371,0.247532705920093,0.662794751455832,0,0,0,0,0,1.02000345622126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69716365721711,0.207322110030741,0,0,0,0,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,1.8448265781467,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0.87192013766656,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,5.42621605391443,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,1.00034104211935,1.35632511849868,1.03985430765404,0.892144943985809,0.473107245101804,0,0,0,0,0,0,0,1.95801157462741,5.83343820478455,0,0,0,2.72814814301633,0,6.95497674658265,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,2.41718899183244,0,0.0920809889358963,0.459257792658427,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.551346289938122,0,0,0.0852266274161009,0.979352392114111,0.165284915360978,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0,0,0.744316738719335,0.949138274156178,0.953150969619124,0,0.855877976067841,0,0,0.359744915166629,0,0,0,0,0,0.48763373908959,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,0,0,0,0,0,0,0,0.564862804660675,0.43050537267123,0,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.027268358983,7.42411702081597,11.3649459776716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.69169171316418,0,0,23.925086979894,0.366390373607449,22.3874605927827,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,8.82835412028668,0,0,0,0,0,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,1.58186518546373,0,0,0,0,0,0.213452994739353,2.19790570540343,0,0,3.26030495937733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335917362433631,0,0,2.20592910460226,1.64831716762333,1.41547442093788,2.06697711180972,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66107110487917,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0.869291361512897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,1.39265542612958,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,1.90451545170992,0,0.248298857183432,0,0,0.606351566874658,0,8.89806582821731,0,0.0717222053926763,0.665320713092027,0,0,0,0.628776414746108,2.34640942403454,0,0,0,0.201273793591026,0 | |||
|short_description=p1@BC127839 | |||
}} |
Revision as of 17:11, 10 September 2013
Short description: | p1@BC127839 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC127839_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -240bp_to_BC127839_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.54e-26 | 19 |
amniotic epithelial cell | 1.45e-11 | 2 |
central nervous system pericyte | 2.44e-11 | 2 |
amnion mesenchymal stem cell | 2.38e-10 | 5 |
hepatocyte | 2.81e-10 | 12 |
chorionic membrane mesenchymal stem cell | 2.76e-08 | 3 |
placental epithelial cell | 5.73e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 3.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.67e-36 | 14 |
membranous layer | 2.67e-36 | 14 |
extraembryonic structure | 2.15e-29 | 24 |
amnion | 4.97e-19 | 7 |
chorion | 6.42e-19 | 7 |
somatic layer of lateral plate mesoderm | 1.28e-16 | 8 |
placenta | 2.26e-12 | 4 |
allantois | 2.26e-12 | 4 |
liver | 6.97e-09 | 19 |
digestive gland | 6.97e-09 | 19 |
liver bud | 6.97e-09 | 19 |
egg chorion | 2.76e-08 | 3 |
hepatic diverticulum | 1.36e-07 | 22 |
liver primordium | 1.36e-07 | 22 |
organ component layer | 1.57e-07 | 66 |
digestive tract diverticulum | 3.09e-07 | 23 |
nucleus pulposus | 3.14e-07 | 3 |
axial mesoderm | 3.14e-07 | 3 |
notochord | 3.14e-07 | 3 |
chordamesoderm | 3.14e-07 | 3 |
chest muscle | 9.81e-07 | 1 |
respiratory system muscle | 9.81e-07 | 1 |
skeletal muscle of trunk | 9.81e-07 | 1 |
respiratory system skeletal muscle | 9.81e-07 | 1 |
thoracic segment muscle | 9.81e-07 | 1 |
chest organ | 9.81e-07 | 1 |
muscle of trunk | 9.81e-07 | 1 |
diaphragm | 9.81e-07 | 1 |
future diaphragm | 9.81e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.