FFCP PHASE1:Hg19::chr11:16947382..16947412,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:16947382..16947412,-|id=chr11:16947382..16947412,-|ontology_enrichment_celltype=CL:0000066!7.91e-19!254;CL:0002076!9.63e-09!43;CL:0000223!5.05e-08!59|ontology_enrichment_celltype_v019=CL:0000349;1.19e-08;19|ontology_enrichment_celltype_v019_2=CL:0000066,1.20e-13,253;CL:0000349,1.12e-08,19|ontology_enrichment_development_v019=UBERON:0006595;3.52e-07;86!UBERON:0008947;3.63e-07;29|ontology_enrichment_disease=DOID:305!4.50e-20!106;DOID:0050687!4.71e-17!143;DOID:1749!5.48e-09!14;DOID:299!4.56e-08!25;DOID:162!1.41e-07!235;DOID:14566!2.06e-07!239|ontology_enrichment_disease_v019=DOID:1749;9.57e-10;14|ontology_enrichment_disease_v019_2=DOID:305,5.47e-20,106;DOID:0050687,1.56e-14,143;DOID:1749,7.60e-10,14;DOID:162,5.49e-07,235|ontology_enrichment_uberon=UBERON:0004119!6.10e-15!169;UBERON:0000925!6.10e-15!169;UBERON:0006595!6.10e-15!169;UBERON:0000064!1.20e-13!219;UBERON:0001007!2.63e-12!155;UBERON:0001555!2.63e-12!155;UBERON:0007026!2.63e-12!155;UBERON:0004921!8.68e-12!129;UBERON:0004185!8.68e-12!129;UBERON:0000062!2.80e-11!511;UBERON:0000077!1.34e-10!130;UBERON:0000481!7.26e-10!347;UBERON:0001004!1.46e-09!72;UBERON:0005631!2.24e-08!14;UBERON:0000158!2.24e-08!14;UBERON:0000065!1.57e-07!53;UBERON:0008947!3.09e-07!38;UBERON:0003258!3.09e-07!38;UBERON:0000468!3.33e-07!659;UBERON:0001041!6.45e-07!98;UBERON:0007023!7.21e-07!115;UBERON:0000072!9.53e-07!46|ontology_enrichment_uberon_v019=UBERON:0001737;3.82e-11;9!UBERON:0001557;3.82e-11;9!UBERON:0005631;6.34e-10;10!UBERON:0000158;6.34e-10;10!UBERON:0000478;6.84e-09;24!UBERON:0002294;3.78e-07;7!UBERON:0001173;3.78e-07;7!UBERON:0001987;5.06e-07;4!UBERON:0004921;7.57e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.30e-15,14;UBERON:0000158,3.30e-15,14;UBERON:0004119,8.24e-13,160;UBERON:0000925,8.24e-13,160;UBERON:0006595,8.24e-13,160;UBERON:0001737,4.81e-11,9;UBERON:0001007,6.44e-11,145;UBERON:0001555,6.44e-11,145;UBERON:0007026,6.44e-11,145;UBERON:0003124,8.43e-11,7;UBERON:0004923,2.19e-09,66;UBERON:0004921,2.90e-09,118;UBERON:0000478,6.14e-09,24;UBERON:0003975,3.97e-08,22;UBERON:0004175,6.72e-08,25;UBERON:0000995,2.36e-07,21;UBERON:0001987,4.59e-07,4;UBERON:0004340,4.59e-07,4;UBERON:0001004,6.67e-07,74;UBERON:0005795,6.86e-07,22;UBERON:0003134,7.83e-07,37;UBERON:0000474,7.83e-07,37|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,1.22866968250754,6.28021051175185,13.5433650720707,11.3419800638235,0,0,0,0,0,0,1.10808952269109,0.204000691244253,0.940364164434263,0.286235987131057,0.136874425072884,0.251085279189606,0.534893840235659,0.246301768349837,0.550975469195755,0,0,0.154816123316076,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0.661743720148475,0,0.087834785693126,0.130979075497713,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01304409331664,2.64818361626438,0,0,2.80338800071154,0,0.98667019366864,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8034837803194,0.558350568994769,0,0,0,0,0,0,0,0,1.15956511897978,0,0.573609190778008,0.243947412259191,0.265059536642971,0.116193942869518,0.414644220061482,0.504641701751257,0,0,0,0,0,0,3.07597680103594,3.20310911148393,3.13314338848527,2.97793726377464,2.39667388501647,2.37270619111097,2.15730093056263,2.35465758150415,1.53898862778556,0,0,2.8810180793198,0,0,0.982827216677626,0,0,6.51838724278502,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0,0,0.806026704325635,0,3.06706143332169,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,5.67396528093113,0.532844358032199,0,0,0.823240336780769,0,0,0,0.602878754119172,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,8.18444442904901,18.3078983461547,7.86214762657169,0,0.767309866440312,0,0,0,0.482561763430822,0,0,0,0,0,0,5.55953468121462,0.601519410909855,0.552485933615378,0,0,0.131124414959424,0.902399225814824,1.61732207919271,1.56869953835371,0,0,0,0,1.0795795805107,0,0.270946437543853,0,5.3524017339458,9.14183609821597,1.11937377361089,0,0,0.256450125116389,2.95213181129735,0.325378394664303,1.13345112812495,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.638063562472921,0.10115778085555,0,0,0,0.616067160352178,0,0,0,0.429374660225974,0,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0,0.202182481573316,0,0,0,0.731140468893853,1.05650146756755,0,0,0,0,1.32687795048244,1.75380354101505,0.5787755342666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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:16947382..16947412,- | |||
|id=chr11:16947382..16947412,- | |||
|ontology_enrichment_celltype=CL:0000066!7.91e-19!254;CL:0002076!9.63e-09!43;CL:0000223!5.05e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.19e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.20e-13,253;CL:0000349,1.12e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0006595;3.52e-07;86!UBERON:0008947;3.63e-07;29 | |||
|ontology_enrichment_disease=DOID:305!4.50e-20!106;DOID:0050687!4.71e-17!143;DOID:1749!5.48e-09!14;DOID:299!4.56e-08!25;DOID:162!1.41e-07!235;DOID:14566!2.06e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.57e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.47e-20,106;DOID:0050687,1.56e-14,143;DOID:1749,7.60e-10,14;DOID:162,5.49e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.10e-15!169;UBERON:0000925!6.10e-15!169;UBERON:0006595!6.10e-15!169;UBERON:0000064!1.20e-13!219;UBERON:0001007!2.63e-12!155;UBERON:0001555!2.63e-12!155;UBERON:0007026!2.63e-12!155;UBERON:0004921!8.68e-12!129;UBERON:0004185!8.68e-12!129;UBERON:0000062!2.80e-11!511;UBERON:0000077!1.34e-10!130;UBERON:0000481!7.26e-10!347;UBERON:0001004!1.46e-09!72;UBERON:0005631!2.24e-08!14;UBERON:0000158!2.24e-08!14;UBERON:0000065!1.57e-07!53;UBERON:0008947!3.09e-07!38;UBERON:0003258!3.09e-07!38;UBERON:0000468!3.33e-07!659;UBERON:0001041!6.45e-07!98;UBERON:0007023!7.21e-07!115;UBERON:0000072!9.53e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.82e-11;9!UBERON:0001557;3.82e-11;9!UBERON:0005631;6.34e-10;10!UBERON:0000158;6.34e-10;10!UBERON:0000478;6.84e-09;24!UBERON:0002294;3.78e-07;7!UBERON:0001173;3.78e-07;7!UBERON:0001987;5.06e-07;4!UBERON:0004921;7.57e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.30e-15,14;UBERON:0000158,3.30e-15,14;UBERON:0004119,8.24e-13,160;UBERON:0000925,8.24e-13,160;UBERON:0006595,8.24e-13,160;UBERON:0001737,4.81e-11,9;UBERON:0001007,6.44e-11,145;UBERON:0001555,6.44e-11,145;UBERON:0007026,6.44e-11,145;UBERON:0003124,8.43e-11,7;UBERON:0004923,2.19e-09,66;UBERON:0004921,2.90e-09,118;UBERON:0000478,6.14e-09,24;UBERON:0003975,3.97e-08,22;UBERON:0004175,6.72e-08,25;UBERON:0000995,2.36e-07,21;UBERON:0001987,4.59e-07,4;UBERON:0004340,4.59e-07,4;UBERON:0001004,6.67e-07,74;UBERON:0005795,6.86e-07,22;UBERON:0003134,7.83e-07,37;UBERON:0000474,7.83e-07,37 | |||
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| |||
|short_description=p@chr11:16947382..16947412,- | |||
}} |
Revision as of 16:54, 10 September 2013
Short description: | p@chr11:16947382..16947412, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:16947382..16947412, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.20e-13 | 253 |
extraembryonic cell | 1.12e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.30e-15 | 14 |
membranous layer | 3.30e-15 | 14 |
endoderm-derived structure | 8.24e-13 | 160 |
endoderm | 8.24e-13 | 160 |
presumptive endoderm | 8.24e-13 | 160 |
larynx | 4.81e-11 | 9 |
digestive system | 6.44e-11 | 145 |
digestive tract | 6.44e-11 | 145 |
primitive gut | 6.44e-11 | 145 |
chorion | 8.43e-11 | 7 |
organ component layer | 2.19e-09 | 66 |
subdivision of digestive tract | 2.90e-09 | 118 |
extraembryonic structure | 6.14e-09 | 24 |
internal female genitalia | 3.97e-08 | 22 |
internal genitalia | 6.72e-08 | 25 |
uterus | 2.36e-07 | 21 |
placenta | 4.59e-07 | 4 |
allantois | 4.59e-07 | 4 |
respiratory system | 6.67e-07 | 74 |
embryonic uterus | 6.86e-07 | 22 |
female reproductive organ | 7.83e-07 | 37 |
female reproductive system | 7.83e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.47e-20 | 106 |
cell type cancer | 1.56e-14 | 143 |
squamous cell carcinoma | 7.60e-10 | 14 |
cancer | 5.49e-07 | 235 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.