FFCP PHASE1:Hg19::chr11:73020686..73020697,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9828|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=21726|TSSclassifier=W|UniProt=Q96PE2|association_with_transcript=-190bp_to_AB002335_5end|description=CAGE_peak_23_at_ARHGEF17_5end|id=chr11:73020686..73020697,+|ontology_enrichment_celltype=CL:0000708!1.90e-08!3;CL:0002590!2.73e-08!3;CL:0000064!2.31e-07!3;CL:0005012!2.31e-07!3;CL:0000067!2.31e-07!3;CL:0002304!2.31e-07!3|ontology_enrichment_celltype_v019=CL:0002575;2.85e-45;2!CL:0002590;4.83e-30;3!CL:0000669;3.11e-23;4!CL:0000511;3.67e-23;1!CL:0002625;3.67e-23;1!CL:0000216;3.67e-23;1!CL:0000708;8.63e-09;3!CL:0000346;1.26e-08;3!CL:1000428;1.26e-08;3|ontology_enrichment_celltype_v019_2=CL:0002575,2.55e-45,2;CL:0002590,4.84e-30,3;CL:0000511,2.10e-23,1;CL:0002625,2.10e-23,1;CL:0000216,2.10e-23,1;CL:0000669,2.94e-23,4;CL:0000708,8.96e-09,3;CL:0000346,1.12e-08,3;CL:1000428,1.12e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002616!1.56e-15!59;UBERON:0000955!1.51e-14!69;UBERON:0006238!1.51e-14!69;UBERON:0001017!1.09e-13!82;UBERON:0002200!5.30e-13!11;UBERON:0006876!5.30e-13!11;UBERON:0005284!7.73e-13!5;UBERON:0000033!8.52e-13!123;UBERON:0000153!9.29e-13!129;UBERON:0007811!9.29e-13!129;UBERON:0005743!9.97e-13!86;UBERON:0000073!7.16e-11!94;UBERON:0001016!7.16e-11!94;UBERON:0003075!1.68e-10!86;UBERON:0007284!1.68e-10!86;UBERON:0007023!2.08e-10!115;UBERON:0001049!2.79e-10!57;UBERON:0005068!2.79e-10!57;UBERON:0006241!2.79e-10!57;UBERON:0007135!2.79e-10!57;UBERON:0002346!9.42e-10!90;UBERON:0000477!1.32e-08!286;UBERON:0003210!1.90e-08!3;UBERON:0004121!2.30e-08!169;UBERON:0002780!2.34e-08!41;UBERON:0001890!2.34e-08!41;UBERON:0006240!2.34e-08!41;UBERON:0003056!3.41e-08!61;UBERON:0003080!4.41e-08!42;UBERON:0000119!5.32e-08!312;UBERON:0000924!5.63e-08!173;UBERON:0006601!5.63e-08!173;UBERON:0001893!8.82e-08!34;UBERON:0000475!8.95e-08!365;UBERON:0001778!2.31e-07!3;UBERON:0001775!2.31e-07!3;UBERON:0001950!3.47e-07!20;UBERON:0001869!5.22e-07!32;UBERON:0002791!6.79e-07!33;UBERON:0000956!9.66e-07!25;UBERON:0000203!9.66e-07!25|ontology_enrichment_uberon_v019=UBERON:0001136;3.67e-23;1!UBERON:0001343;3.67e-23;1!UBERON:0004910;3.67e-23;1!UBERON:0004813;3.67e-23;1!UBERON:0005284;1.77e-18;5!UBERON:0004909;2.74e-12;2!UBERON:0006876;6.10e-09;11!UBERON:0003210;8.63e-09;3!UBERON:0000412;1.26e-08;3!UBERON:0001992;1.26e-08;3!UBERON:0005904;8.85e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.10e-23,1;UBERON:0001343,2.10e-23,1;UBERON:0004910,2.10e-23,1;UBERON:0005154,2.10e-23,1;UBERON:0005295,2.10e-23,1;UBERON:0004813,2.10e-23,1;UBERON:0005297,2.10e-23,1;UBERON:0005294,2.10e-23,1;UBERON:0010141,2.10e-23,1;UBERON:0005891,2.10e-23,1;UBERON:0005284,1.77e-18,5;UBERON:0004909,2.07e-12,2;UBERON:0006876,6.10e-09,11;UBERON:0003210,8.96e-09,3;UBERON:0000412,1.12e-08,3;UBERON:0001992,1.12e-08,3;UBERON:0005904,7.70e-07,4|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.672786506072164,3.48768055066624,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,3.72022199179207,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,1.48863347743867,1.2655176988749,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,1.20990716048664,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9828 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21726 | |||
|TSSclassifier=W | |||
|UniProt=Q96PE2 | |||
|association_with_transcript=-190bp_to_AB002335_5end | |||
|description=CAGE_peak_23_at_ARHGEF17_5end | |||
|id=chr11:73020686..73020697,+ | |||
|ontology_enrichment_celltype=CL:0000708!1.90e-08!3;CL:0002590!2.73e-08!3;CL:0000064!2.31e-07!3;CL:0005012!2.31e-07!3;CL:0000067!2.31e-07!3;CL:0002304!2.31e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002575;2.85e-45;2!CL:0002590;4.83e-30;3!CL:0000669;3.11e-23;4!CL:0000511;3.67e-23;1!CL:0002625;3.67e-23;1!CL:0000216;3.67e-23;1!CL:0000708;8.63e-09;3!CL:0000346;1.26e-08;3!CL:1000428;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.55e-45,2;CL:0002590,4.84e-30,3;CL:0000511,2.10e-23,1;CL:0002625,2.10e-23,1;CL:0000216,2.10e-23,1;CL:0000669,2.94e-23,4;CL:0000708,8.96e-09,3;CL:0000346,1.12e-08,3;CL:1000428,1.12e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.56e-15!59;UBERON:0000955!1.51e-14!69;UBERON:0006238!1.51e-14!69;UBERON:0001017!1.09e-13!82;UBERON:0002200!5.30e-13!11;UBERON:0006876!5.30e-13!11;UBERON:0005284!7.73e-13!5;UBERON:0000033!8.52e-13!123;UBERON:0000153!9.29e-13!129;UBERON:0007811!9.29e-13!129;UBERON:0005743!9.97e-13!86;UBERON:0000073!7.16e-11!94;UBERON:0001016!7.16e-11!94;UBERON:0003075!1.68e-10!86;UBERON:0007284!1.68e-10!86;UBERON:0007023!2.08e-10!115;UBERON:0001049!2.79e-10!57;UBERON:0005068!2.79e-10!57;UBERON:0006241!2.79e-10!57;UBERON:0007135!2.79e-10!57;UBERON:0002346!9.42e-10!90;UBERON:0000477!1.32e-08!286;UBERON:0003210!1.90e-08!3;UBERON:0004121!2.30e-08!169;UBERON:0002780!2.34e-08!41;UBERON:0001890!2.34e-08!41;UBERON:0006240!2.34e-08!41;UBERON:0003056!3.41e-08!61;UBERON:0003080!4.41e-08!42;UBERON:0000119!5.32e-08!312;UBERON:0000924!5.63e-08!173;UBERON:0006601!5.63e-08!173;UBERON:0001893!8.82e-08!34;UBERON:0000475!8.95e-08!365;UBERON:0001778!2.31e-07!3;UBERON:0001775!2.31e-07!3;UBERON:0001950!3.47e-07!20;UBERON:0001869!5.22e-07!32;UBERON:0002791!6.79e-07!33;UBERON:0000956!9.66e-07!25;UBERON:0000203!9.66e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;3.67e-23;1!UBERON:0001343;3.67e-23;1!UBERON:0004910;3.67e-23;1!UBERON:0004813;3.67e-23;1!UBERON:0005284;1.77e-18;5!UBERON:0004909;2.74e-12;2!UBERON:0006876;6.10e-09;11!UBERON:0003210;8.63e-09;3!UBERON:0000412;1.26e-08;3!UBERON:0001992;1.26e-08;3!UBERON:0005904;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.10e-23,1;UBERON:0001343,2.10e-23,1;UBERON:0004910,2.10e-23,1;UBERON:0005154,2.10e-23,1;UBERON:0005295,2.10e-23,1;UBERON:0004813,2.10e-23,1;UBERON:0005297,2.10e-23,1;UBERON:0005294,2.10e-23,1;UBERON:0010141,2.10e-23,1;UBERON:0005891,2.10e-23,1;UBERON:0005284,1.77e-18,5;UBERON:0004909,2.07e-12,2;UBERON:0006876,6.10e-09,11;UBERON:0003210,8.96e-09,3;UBERON:0000412,1.12e-08,3;UBERON:0001992,1.12e-08,3;UBERON:0005904,7.70e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.672786506072164,3.48768055066624,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,3.72022199179207,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,1.48863347743867,1.2655176988749,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,1.20990716048664,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0.203974470572744,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p23@ARHGEF17 | |||
}} |
Revision as of 19:35, 10 September 2013
Short description: | p23@ARHGEF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_ARHGEF17_5end |
Coexpression cluster: | NA |
Association with transcript: | -190bp_to_AB002335_5end |
EntrezGene: | ARHGEF17 |
HGNC: | 21726 |
UniProt: | Q96PE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.55e-45 | 2 |
smooth muscle cell of the brain vasculature | 4.84e-30 | 3 |
androgen binding protein secreting cell | 2.10e-23 | 1 |
seminiferous tubule epithelial cell | 2.10e-23 | 1 |
Sertoli cell | 2.10e-23 | 1 |
pericyte cell | 2.94e-23 | 4 |
leptomeningeal cell | 8.96e-09 | 3 |
hair follicle dermal papilla cell | 1.12e-08 | 3 |
stem cell of epidermis | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.10e-23 | 1 |
seminiferous tubule of testis | 2.10e-23 | 1 |
epithelium of male gonad | 2.10e-23 | 1 |
epithelial cord | 2.10e-23 | 1 |
sex cord | 2.10e-23 | 1 |
seminiferous tubule epithelium | 2.10e-23 | 1 |
testis sex cord | 2.10e-23 | 1 |
genital ridge | 2.10e-23 | 1 |
primitive sex cord of indifferent gonad | 2.10e-23 | 1 |
coelomic epithelium | 2.10e-23 | 1 |
brain vasculature | 1.77e-18 | 5 |
epithelium of gonad | 2.07e-12 | 2 |
vasculature of organ | 6.10e-09 | 11 |
blood-cerebrospinal fluid barrier | 8.96e-09 | 3 |
dermal papilla | 1.12e-08 | 3 |
papillary layer of dermis | 1.12e-08 | 3 |
duct of male reproductive system | 7.70e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.