FFCP PHASE1:Hg19::chr12:27167220..27167231,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51768|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23049|TSSclassifier=S|UniProt=F5GWC3|association_with_transcript=48bp_to_ENST00000535819_5end|description=CAGE_peak_2_at_TM7SF3_5end|id=chr12:27167220..27167231,-|ontology_enrichment_celltype=CL:0000066!1.17e-22!254;CL:0000223!5.70e-13!59;CL:0002076!1.99e-12!43;CL:0002368!2.04e-08!13;CL:0002159!4.04e-08!13|ontology_enrichment_celltype_v019=CL:0002368;4.75e-14;13!CL:0002076;1.00e-13;42!CL:0002159;1.61e-10;14!CL:0000240;3.21e-10;6!CL:0000311;3.21e-10;6!CL:0000079;3.21e-10;6!CL:0000237;3.21e-10;6!CL:0002202;2.19e-09;9!CL:0002632;2.19e-09;9!CL:0000039;3.25e-09;7!CL:0000586;3.25e-09;7!CL:0000312;2.80e-08;5!CL:0002328;3.94e-08;3!CL:0002621;3.94e-08;3!CL:0000307;5.36e-08;3|ontology_enrichment_celltype_v019_2=CL:0002076,1.71e-16,42;CL:0000223,3.01e-16,58;CL:0000066,6.29e-16,253;CL:0002368,4.11e-14,13;CL:0002159,2.23e-10,14;CL:0000240,4.26e-10,6;CL:0000311,4.26e-10,6;CL:0000079,4.26e-10,6;CL:0000237,4.26e-10,6;CL:0000036,4.26e-10,6;CL:0000357,4.26e-10,6;CL:0000114,4.26e-10,6;CL:0002202,1.91e-09,9;CL:0002632,1.91e-09,9;CL:0000039,3.40e-09,7;CL:0000586,3.40e-09,7;CL:0002328,1.33e-08,3;CL:0002621,2.21e-08,3;CL:0000312,5.13e-08,5;CL:0000068,1.23e-07,3;CL:0000069,1.23e-07,3;CL:0000307,1.23e-07,3;CL:0000377,1.23e-07,3;CL:0002077,9.60e-07,34|ontology_enrichment_development_v019=CL:0000357;3.21e-10;6!CL:0000114;3.21e-10;6!CL:0000223;6.20e-10;58!CL:0000377;5.36e-08;3|ontology_enrichment_disease=DOID:305!2.78e-16!106;DOID:162!3.29e-13!235;DOID:14566!1.39e-12!239;DOID:0050687!2.71e-11!143;DOID:0050686!9.26e-07!137|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!9.25e-15!169;UBERON:0000925!9.25e-15!169;UBERON:0006595!9.25e-15!169;UBERON:0004921!9.99e-14!129;UBERON:0004185!9.99e-14!129;UBERON:0000065!1.18e-13!53;UBERON:0001007!1.19e-12!155;UBERON:0001555!1.19e-12!155;UBERON:0007026!1.19e-12!155;UBERON:0001004!3.51e-12!72;UBERON:0000072!2.11e-11!46;UBERON:0001041!2.60e-11!98;UBERON:0000077!2.70e-11!130;UBERON:0005911!3.30e-11!82;UBERON:0004807!3.89e-10!28;UBERON:0008947!5.04e-10!38;UBERON:0003258!5.04e-10!38;UBERON:0005153!8.62e-09!37;UBERON:0005157!1.43e-07!51;UBERON:0005178!8.93e-07!34;UBERON:0002224!8.93e-07!34|ontology_enrichment_uberon_v019=UBERON:0004815;3.94e-08;3!UBERON:0002031;3.94e-08;3!UBERON:0001949;3.94e-08;3!UBERON:0005911;6.61e-07;36|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.33e-08,3;UBERON:0002031,1.33e-08,3;UBERON:0004807,1.37e-08,28;UBERON:0001949,2.21e-08,3;UBERON:0001004,3.68e-07,74;UBERON:0005911,3.89e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0.229240217243854,0.328402357799783,0.472264687882075,0,0,0,1.83884244895785,1.8072355126695,3.32778609150109,1.54934401160603,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,0.334372990781356,0,0.473447805734733,0,0.445641827540694,0.589211814949674,0.221533894583621,0,1.15282187753108,0.780356085359269,0.328875809207352,0.829050053357545,0.579606171470105,0,0.802622484269139,0,0.453237370790265,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0.327447688744282,2.18577172975525,2.96627554227544,0,0,0,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0,0.402829317109147,0.760272105718513,0.732186172644509,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0.949265659568129,0,0,0,1.74437620857014,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,1.73934767846967,1.63647672354501,3.15485054927904,0.731842236777572,0.530119073285941,0.69716365721711,0.829288440122964,1.7662459561294,1.45990943630332,0,0,0,0,0,0.236613600079688,0.337169380156203,0.482022059766964,0.772057809126758,1.08939722046203,0.71181185733329,0.404493924480493,0.98110732562673,0,0,0,0,0,1.26755034821831,0.982827216677626,0,2.6487785964879,0.860919069801795,0.343135620597051,1.20725313949488,2.24803506515239,1.10581869652794,1.75918045801206,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,4.19955320497149,1.55952606966625,2.14940454486836,2.61570544662566,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0,0.336255431980582,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51768 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23049 | |||
|TSSclassifier=S | |||
|UniProt=F5GWC3 | |||
|association_with_transcript=48bp_to_ENST00000535819_5end | |||
|description=CAGE_peak_2_at_TM7SF3_5end | |||
|id=chr12:27167220..27167231,- | |||
|ontology_enrichment_celltype=CL:0000066!1.17e-22!254;CL:0000223!5.70e-13!59;CL:0002076!1.99e-12!43;CL:0002368!2.04e-08!13;CL:0002159!4.04e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.75e-14;13!CL:0002076;1.00e-13;42!CL:0002159;1.61e-10;14!CL:0000240;3.21e-10;6!CL:0000311;3.21e-10;6!CL:0000079;3.21e-10;6!CL:0000237;3.21e-10;6!CL:0002202;2.19e-09;9!CL:0002632;2.19e-09;9!CL:0000039;3.25e-09;7!CL:0000586;3.25e-09;7!CL:0000312;2.80e-08;5!CL:0002328;3.94e-08;3!CL:0002621;3.94e-08;3!CL:0000307;5.36e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.71e-16,42;CL:0000223,3.01e-16,58;CL:0000066,6.29e-16,253;CL:0002368,4.11e-14,13;CL:0002159,2.23e-10,14;CL:0000240,4.26e-10,6;CL:0000311,4.26e-10,6;CL:0000079,4.26e-10,6;CL:0000237,4.26e-10,6;CL:0000036,4.26e-10,6;CL:0000357,4.26e-10,6;CL:0000114,4.26e-10,6;CL:0002202,1.91e-09,9;CL:0002632,1.91e-09,9;CL:0000039,3.40e-09,7;CL:0000586,3.40e-09,7;CL:0002328,1.33e-08,3;CL:0002621,2.21e-08,3;CL:0000312,5.13e-08,5;CL:0000068,1.23e-07,3;CL:0000069,1.23e-07,3;CL:0000307,1.23e-07,3;CL:0000377,1.23e-07,3;CL:0002077,9.60e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;3.21e-10;6!CL:0000114;3.21e-10;6!CL:0000223;6.20e-10;58!CL:0000377;5.36e-08;3 | |||
|ontology_enrichment_disease=DOID:305!2.78e-16!106;DOID:162!3.29e-13!235;DOID:14566!1.39e-12!239;DOID:0050687!2.71e-11!143;DOID:0050686!9.26e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!9.25e-15!169;UBERON:0000925!9.25e-15!169;UBERON:0006595!9.25e-15!169;UBERON:0004921!9.99e-14!129;UBERON:0004185!9.99e-14!129;UBERON:0000065!1.18e-13!53;UBERON:0001007!1.19e-12!155;UBERON:0001555!1.19e-12!155;UBERON:0007026!1.19e-12!155;UBERON:0001004!3.51e-12!72;UBERON:0000072!2.11e-11!46;UBERON:0001041!2.60e-11!98;UBERON:0000077!2.70e-11!130;UBERON:0005911!3.30e-11!82;UBERON:0004807!3.89e-10!28;UBERON:0008947!5.04e-10!38;UBERON:0003258!5.04e-10!38;UBERON:0005153!8.62e-09!37;UBERON:0005157!1.43e-07!51;UBERON:0005178!8.93e-07!34;UBERON:0002224!8.93e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.94e-08;3!UBERON:0002031;3.94e-08;3!UBERON:0001949;3.94e-08;3!UBERON:0005911;6.61e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.33e-08,3;UBERON:0002031,1.33e-08,3;UBERON:0004807,1.37e-08,28;UBERON:0001949,2.21e-08,3;UBERON:0001004,3.68e-07,74;UBERON:0005911,3.89e-07,82 | |||
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| |||
|short_description=p2@TM7SF3 | |||
}} |
Revision as of 22:19, 10 September 2013
Short description: | p2@TM7SF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TM7SF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_ENST00000535819_5end |
EntrezGene: | TM7SF3 |
HGNC: | 23049 |
UniProt: | F5GWC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.71e-16 | 42 |
endodermal cell | 3.01e-16 | 58 |
epithelial cell | 6.29e-16 | 253 |
respiratory epithelial cell | 4.11e-14 | 13 |
general ecto-epithelial cell | 2.23e-10 | 14 |
stratified squamous epithelial cell | 4.26e-10 | 6 |
keratin accumulating cell | 4.26e-10 | 6 |
stratified epithelial cell | 4.26e-10 | 6 |
keratinizing barrier epithelial cell | 4.26e-10 | 6 |
epithelial fate stem cell | 4.26e-10 | 6 |
stratified epithelial stem cell | 4.26e-10 | 6 |
surface ectodermal cell | 4.26e-10 | 6 |
epithelial cell of tracheobronchial tree | 1.91e-09 | 9 |
epithelial cell of lower respiratory tract | 1.91e-09 | 9 |
germ line cell | 3.40e-09 | 7 |
germ cell | 3.40e-09 | 7 |
bronchial epithelial cell | 1.33e-08 | 3 |
gingival epithelial cell | 2.21e-08 | 3 |
keratinocyte | 5.13e-08 | 5 |
duct epithelial cell | 1.23e-07 | 3 |
branched duct epithelial cell | 1.23e-07 | 3 |
tracheal epithelial cell | 1.23e-07 | 3 |
tracheoblast | 1.23e-07 | 3 |
ecto-epithelial cell | 9.60e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.33e-08 | 3 |
epithelium of bronchus | 1.33e-08 | 3 |
respiratory system epithelium | 1.37e-08 | 28 |
gingival epithelium | 2.21e-08 | 3 |
respiratory system | 3.68e-07 | 74 |
endo-epithelium | 3.89e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.