FFCP PHASE1:Hg19::chr12:49687425..49687439,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5630|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9461|TSSclassifier=S|UniProt=P41219|association_with_transcript=-45bp_to_ENST00000257860_5end|description=CAGE_peak_5_at_PRPH_5end|id=chr12:49687425..49687439,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;2.02e-15;5!CL:0002535;3.13e-10;2|ontology_enrichment_celltype_v019_2=CL:0002535,2.99e-10,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3095!1.14e-09!22;DOID:2994!1.14e-09!22|ontology_enrichment_disease_v019=DOID:6193;1.88e-19;1!DOID:169;5.10e-13;6!DOID:154;2.07e-10;2!DOID:3350;2.07e-10;2!DOID:4236;2.07e-10;2!DOID:1115;8.99e-09;20!DOID:171;3.50e-08;10!DOID:3095;5.01e-08;22!DOID:2994;5.01e-08;22|ontology_enrichment_disease_v019_2=DOID:6193,1.56e-19,1;DOID:169,4.52e-13,6;DOID:3350,1.89e-10,2;DOID:154,2.07e-10,2;DOID:4236,2.07e-10,2;DOID:1115,9.48e-09,20;DOID:171,3.25e-08,10;DOID:3095,4.89e-08,22;DOID:2994,4.89e-08,22;DOID:0050687,1.36e-07,143;DOID:162,6.08e-07,235;DOID:14566,8.82e-07,239|ontology_enrichment_uberon=UBERON:0000013!1.86e-07!5;UBERON:0002410!1.86e-07!5|ontology_enrichment_uberon_v019=UBERON:0000013;2.02e-15;5!UBERON:0002410;2.02e-15;5!UBERON:0006955;3.13e-10;2!UBERON:0004801;3.13e-10;2!UBERON:0000010;5.42e-09;8|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.75e-15,5;UBERON:0002410,1.75e-15,5;UBERON:0006955,2.99e-10,2;UBERON:0004801,2.99e-10,2;UBERON:0000010,5.00e-09,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13692047889758,2.62444152044929,3.12524990879926,0,0,0,0,0,0,0.32681539055697,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.554698692052555,0,0,0,0,3.61170668190395,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,4.63646689005732,0,1.96577348745625,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,0,5.47895232305697,0,0,0.214429632529969,0,0,1.04314963381548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.439762066981716,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872701380680755,0.5290268405154,0,0,0,0,0.109265571963696,3.04076402427449,0,0.26721740526556,0.36757959813938,0,0,0.803892390468535,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p5@PRPH}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5630 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9461 | |||
|TSSclassifier=S | |||
|UniProt=P41219 | |||
|association_with_transcript=-45bp_to_ENST00000257860_5end | |||
|description=CAGE_peak_5_at_PRPH_5end | |||
|id=chr12:49687425..49687439,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.02e-15;5!CL:0002535;3.13e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.99e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!1.14e-09!22;DOID:2994!1.14e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:6193;1.88e-19;1!DOID:169;5.10e-13;6!DOID:154;2.07e-10;2!DOID:3350;2.07e-10;2!DOID:4236;2.07e-10;2!DOID:1115;8.99e-09;20!DOID:171;3.50e-08;10!DOID:3095;5.01e-08;22!DOID:2994;5.01e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.56e-19,1;DOID:169,4.52e-13,6;DOID:3350,1.89e-10,2;DOID:154,2.07e-10,2;DOID:4236,2.07e-10,2;DOID:1115,9.48e-09,20;DOID:171,3.25e-08,10;DOID:3095,4.89e-08,22;DOID:2994,4.89e-08,22;DOID:0050687,1.36e-07,143;DOID:162,6.08e-07,235;DOID:14566,8.82e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.86e-07!5;UBERON:0002410!1.86e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.02e-15;5!UBERON:0002410;2.02e-15;5!UBERON:0006955;3.13e-10;2!UBERON:0004801;3.13e-10;2!UBERON:0000010;5.42e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.75e-15,5;UBERON:0002410,1.75e-15,5;UBERON:0006955,2.99e-10,2;UBERON:0004801,2.99e-10,2;UBERON:0000010,5.00e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13692047889758,2.62444152044929,3.12524990879926,0,0,0,0,0,0,0.32681539055697,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.554698692052555,0,0,0,0,3.61170668190395,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,4.63646689005732,0,1.96577348745625,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,0,5.47895232305697,0,0,0.214429632529969,0,0,1.04314963381548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.439762066981716,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872701380680755,0.5290268405154,0,0,0,0,0.109265571963696,3.04076402427449,0,0.26721740526556,0.36757959813938,0,0,0.803892390468535,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@PRPH | |||
}} |
Revision as of 22:54, 10 September 2013
Short description: | p5@PRPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PRPH_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_ENST00000257860_5end |
EntrezGene: | PRPH |
HGNC: | 9461 |
UniProt: | P41219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.99e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.75e-15 | 5 |
autonomic nervous system | 1.75e-15 | 5 |
uterine epithelium | 2.99e-10 | 2 |
cervix epithelium | 2.99e-10 | 2 |
peripheral nervous system | 5.00e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.56e-19 | 1 |
neuroendocrine tumor | 4.52e-13 | 6 |
mesenchymal cell neoplasm | 1.89e-10 | 2 |
mixed cell type cancer | 2.07e-10 | 2 |
carcinosarcoma | 2.07e-10 | 2 |
sarcoma | 9.48e-09 | 20 |
neuroectodermal tumor | 3.25e-08 | 10 |
germ cell and embryonal cancer | 4.89e-08 | 22 |
germ cell cancer | 4.89e-08 | 22 |
cell type cancer | 1.36e-07 | 143 |
cancer | 6.08e-07 | 235 |
disease of cellular proliferation | 8.82e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.