FFCP PHASE1:Hg19::chr12:51663830..51663874,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:51663830..51663874,+|id=chr12:51663830..51663874,+|ontology_enrichment_celltype=CL:0000055!1.04e-22!180;CL:0000057!3.24e-17!75;CL:0002321!1.73e-12!248;CL:0000220!2.88e-12!246;CL:0000548!2.68e-11!679;CL:0000004!2.68e-11!679;CL:0000255!2.68e-11!679;CL:0000012!1.16e-10!682;CL:0000066!8.91e-09!254;CL:0000183!2.58e-08!59;CL:0000680!1.22e-07!57;CL:0000056!1.22e-07!57;CL:0000355!1.22e-07!57;CL:0000144!3.14e-07!625;CL:0000187!3.85e-07!54;CL:0000393!6.11e-07!60;CL:0000211!6.11e-07!60;CL:0002371!9.20e-07!591|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000057,4.61e-16,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!1.93e-10!238;UBERON:0009142!1.93e-10!238;UBERON:0002100!2.75e-10!216;UBERON:0005256!3.22e-10!143;UBERON:0000914!3.87e-10!83;UBERON:0002329!3.87e-10!83;UBERON:0003077!3.87e-10!83;UBERON:0003059!3.87e-10!83;UBERON:0007282!3.87e-10!83;UBERON:0009618!3.87e-10!83;UBERON:0007285!3.87e-10!83;UBERON:0000481!9.26e-10!347;UBERON:0003102!1.03e-09!95;UBERON:0000486!1.46e-08!82;UBERON:0000475!3.30e-08!365;UBERON:0004290!1.12e-07!70;UBERON:0000119!4.56e-07!312;UBERON:0004119!5.82e-07!169;UBERON:0000925!5.82e-07!169;UBERON:0006595!5.82e-07!169;UBERON:0000483!6.33e-07!309|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.97e-08,99;UBERON:0007524,3.02e-07,73;UBERON:0007503,4.60e-07,78;UBERON:0002329,4.73e-07,71;UBERON:0003059,4.73e-07,71;UBERON:0007282,4.73e-07,71;UBERON:0004290,4.73e-07,71;UBERON:0009618,4.73e-07,71;UBERON:0000486,7.50e-07,83;UBERON:0003077,7.68e-07,72;UBERON:0007285,7.68e-07,72;UBERON:0002199,8.29e-07,46;UBERON:0002416,8.29e-07,46|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0.218441372130172,0,0.74259811776028,0.331397375727916,0.672325146451775,0,1.46062018077475,0.487932798790507,0.61560529038394,2.24400760368678,0.626909442956176,0.85870796139317,0.958120975510189,0.376627918784408,0,0,0,0,0,0.154816123316076,1.83884244895785,1.204823675113,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0.34362744548263,0,0,0.651083453856419,0.950452044448374,0.301150238155546,0,0,0,0.821127996921047,0.604820229674197,0,0.289648807765598,0,1.34140171940727,0.511450247374121,1.0843174571537,1.00267582127178,0.434539556882471,0,0.973269740605272,0.756278537312543,0.665188192387692,0.702678285545008,0.130979075497713,2.18577172975525,1.11235332835329,0,0,0,0,0,0,0.39752481473341,1.72046919021225,0.694281003215189,0.56530794192401,0.838998872419812,0.825354125820202,0.417989933073621,0,0.71153252537342,0,0,0.760272105718513,0.732186172644509,0.367663080345869,0,0.357198913136319,0.22452937262617,0.788280363383256,1.53316637465883,0,0,0,0,0.436094052142534,0,0.506522046658319,1.72131935057184,1.43418310374407,1.06400514659507,2.80338800071154,0,0.74000264525148,1.24484414159907,1.0776853765575,1.63461903113459,0.908144565869588,1.15235184896,4.68642863667593,2.49728061464256,0.570471821544449,2.69007624993242,3.52303495931295,2.5899671098901,1.82586048712923,1.22492502752936,3.93069815397658,1.23990937410919,1.18800285728205,1.97813543422845,1.82032272387605,2.87447256726495,2.52504170931099,2.25213335769535,1.6623846929051,3.95079858792754,0.612975591598039,2.10333282469236,0.907457465280168,0.179389635688862,1.06778694409284,0.423863802319124,2.40072876867522,1.03052529238439,0.257640540045629,0,1.68776332241266,1.16924406193438,0.757301322732344,0.736399189138395,1.2931684545505,0.710019185033229,0.604512589365842,0.339121184620975,0.966304265816484,1.09098448236334,0.286804595389004,0.487894824518382,0.795178609928912,0.580969714347592,0.829288440122964,0.756962552626885,1.09493207722749,0,3.21620469096443,0,3.71494342425583,2.88751792667834,0.118306800039844,0.337169380156203,0.482022059766964,0.330881918197182,0.653638332277218,0.237270619111097,0,0.196221465125346,0,0,1.40241773803446,0.8231480226628,0,1.26755034821831,0.982827216677626,0,0,1.35287282397425,0.171567810298526,0.98775256867763,2.24803506515239,1.91005047582099,0.185176890317059,1.3032332212413,4.15973914111831,0,0.231860809950154,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.335964256397719,1.13420077793909,2.7763142037883,1.16253575405585,1.91691339582606,0,0,0,0.144119953416961,0.37872730027914,0.126995788584338,0.381988425558278,0,0,0,0,0,0.784917590417525,0.43596006883328,0.22001485746285,0.517086863031111,10.7296933755565,1.690605505112,0.53187623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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:51663830..51663874,+ | |||
|id=chr12:51663830..51663874,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.04e-22!180;CL:0000057!3.24e-17!75;CL:0002321!1.73e-12!248;CL:0000220!2.88e-12!246;CL:0000548!2.68e-11!679;CL:0000004!2.68e-11!679;CL:0000255!2.68e-11!679;CL:0000012!1.16e-10!682;CL:0000066!8.91e-09!254;CL:0000183!2.58e-08!59;CL:0000680!1.22e-07!57;CL:0000056!1.22e-07!57;CL:0000355!1.22e-07!57;CL:0000144!3.14e-07!625;CL:0000187!3.85e-07!54;CL:0000393!6.11e-07!60;CL:0000211!6.11e-07!60;CL:0002371!9.20e-07!591 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.61e-16,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!1.93e-10!238;UBERON:0009142!1.93e-10!238;UBERON:0002100!2.75e-10!216;UBERON:0005256!3.22e-10!143;UBERON:0000914!3.87e-10!83;UBERON:0002329!3.87e-10!83;UBERON:0003077!3.87e-10!83;UBERON:0003059!3.87e-10!83;UBERON:0007282!3.87e-10!83;UBERON:0009618!3.87e-10!83;UBERON:0007285!3.87e-10!83;UBERON:0000481!9.26e-10!347;UBERON:0003102!1.03e-09!95;UBERON:0000486!1.46e-08!82;UBERON:0000475!3.30e-08!365;UBERON:0004290!1.12e-07!70;UBERON:0000119!4.56e-07!312;UBERON:0004119!5.82e-07!169;UBERON:0000925!5.82e-07!169;UBERON:0006595!5.82e-07!169;UBERON:0000483!6.33e-07!309 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.97e-08,99;UBERON:0007524,3.02e-07,73;UBERON:0007503,4.60e-07,78;UBERON:0002329,4.73e-07,71;UBERON:0003059,4.73e-07,71;UBERON:0007282,4.73e-07,71;UBERON:0004290,4.73e-07,71;UBERON:0009618,4.73e-07,71;UBERON:0000486,7.50e-07,83;UBERON:0003077,7.68e-07,72;UBERON:0007285,7.68e-07,72;UBERON:0002199,8.29e-07,46;UBERON:0002416,8.29e-07,46 | |||
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| |||
|short_description=p@chr12:51663830..51663874,+ | |||
}} |
Revision as of 23:02, 10 September 2013
Short description: | p@chr12:51663830..51663874, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:51663830..51663874, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.61e-16 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.97e-08 | 99 |
dense mesenchyme tissue | 3.02e-07 | 73 |
epithelial vesicle | 4.60e-07 | 78 |
somite | 4.73e-07 | 71 |
presomitic mesoderm | 4.73e-07 | 71 |
presumptive segmental plate | 4.73e-07 | 71 |
dermomyotome | 4.73e-07 | 71 |
trunk paraxial mesoderm | 4.73e-07 | 71 |
multilaminar epithelium | 7.50e-07 | 83 |
paraxial mesoderm | 7.68e-07 | 72 |
presumptive paraxial mesoderm | 7.68e-07 | 72 |
integument | 8.29e-07 | 46 |
integumental system | 8.29e-07 | 46 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.