FFCP PHASE1:Hg19::chr12:91498048..91498066,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1371|description=CAGE_peak_at_chr12:91498048..91498066,-|id=chr12:91498048..91498066,-|ontology_enrichment_celltype=CL:0002620!5.53e-09!23;CL:0000057!3.61e-08!75;CL:0000055!1.14e-07!180;CL:0002334!5.16e-07!12|ontology_enrichment_celltype_v019=CL:0000153;3.30e-12;9!CL:0000447;3.30e-12;9!CL:0000499;2.03e-09;28!CL:0000134;1.25e-08;55!CL:0000135;2.03e-08;3!CL:0000388;2.03e-08;3!CL:0002334;5.83e-08;12!CL:0002580;1.15e-07;3!CL:0000214;1.62e-07;3!CL:0002504;3.11e-07;3!CL:1000279;3.11e-07;3!CL:1000280;3.11e-07;3!CL:0000048;3.53e-07;58!CL:0000723;4.43e-07;61!CL:0000034;5.14e-07;69!CL:0002579;6.47e-07;3!CL:0000327;8.28e-07;15!CL:0000138;9.00e-07;6|ontology_enrichment_celltype_v019_2=CL:0000153,3.11e-12,9;CL:0000447,3.11e-12,9;CL:0000499,1.82e-09,28;CL:0000135,2.09e-08,3;CL:0000388,2.09e-08,3;CL:0002334,5.94e-08,12;CL:0002580,1.12e-07,3;CL:0000214,1.66e-07,3;CL:0002504,2.41e-07,3;CL:1000279,2.41e-07,3;CL:1000280,2.41e-07,3;CL:0002579,4.69e-07,3;CL:0000327,8.02e-07,15;CL:0000058,8.41e-07,6;CL:0000138,8.41e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!8.79e-08!57;UBERON:0004457!1.62e-07!12;UBERON:0000042!1.62e-07!12;UBERON:0000478!3.38e-07!24;UBERON:0005631!9.00e-07!14;UBERON:0000158!9.00e-07!14;UBERON:0003688!9.90e-07!6;UBERON:0002358!9.90e-07!6;UBERON:0003684!9.90e-07!6;UBERON:0001178!9.90e-07!6|ontology_enrichment_uberon_v019=UBERON:0004457;1.56e-14;9!UBERON:0000042;1.56e-14;9!UBERON:0003688;7.41e-09;6!UBERON:0002358;7.41e-09;6!UBERON:0003684;7.41e-09;6!UBERON:0001178;7.41e-09;6!UBERON:0007846;2.03e-08;3!UBERON:0000043;2.03e-08;3!UBERON:0007845;2.03e-08;3!UBERON:0006915;1.62e-07;3!UBERON:0007616;1.62e-07;3!UBERON:0002217;1.62e-07;3!UBERON:0002018;1.62e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.49e-10,12;UBERON:0000042,1.49e-10,12;UBERON:0003688,6.29e-09,6;UBERON:0002358,6.29e-09,6;UBERON:0003684,6.29e-09,6;UBERON:0001178,6.29e-09,6;UBERON:0007846,2.09e-08,3;UBERON:0000043,2.09e-08,3;UBERON:0007845,2.09e-08,3;UBERON:0006915,1.66e-07,3;UBERON:0007616,1.66e-07,3;UBERON:0002217,1.66e-07,3;UBERON:0002018,1.66e-07,3|phase1_expression=0.54503513781167,1.07050261945492,0.986680828671798,7.00513088471913,1.34088328328186,0,2.53299878168311,0,0,0,0,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0,6.86734389530676,2.50668955317945,10.8634889220618,0,15.5723158496843,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,4.84352016359927,4.27114777637135,1.27159140695737,0.900273288253207,0.515262646192195,3.60696756063881,2.79175284497385,0.337552664482532,0.194874010322397,0.757301322732344,2.94559675655358,0.323292113637624,6.03516307278244,1.91428986632517,0.67824236924195,0,0,0,0,0,0.348581828608555,0,0,0,0,3.21620469096443,0,0,2.16563844500876,0.591534000199219,0.842923450390509,0.964044119533928,0.441175890929576,0.871517776369625,0,1.21348177344148,1.56977172100277,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0.463721619900307,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.904902010304444,0,0,2.39344304926383,2.08014873822732,0,0,0,2.14466990487221,1.08524321078289,0.823240336780769,0,0.355391948742546,2.37585561880029,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.03985430765404,2.3195768543631,0.473107245101804,0.585707074963566,0,9.09630016223939,0,0.664225598535437,0,2.5196248195744,0,0,0,0,0,0,0,0.604780586659361,3.2254015016441,3.37616341233737,3.64858122762996,1.92208723883551,4.60536524160033,1.44768529029247,0,0.616838775210622,1.06537035187876,0.0821271560138091,0,0.813472649219715,0,0,0,0.68888668898764,0.728364672026868,1.70461739447251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0.366277859273374,0.660075999364704,0,0,1.6068392984416,0,0,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,1.5740617341532,0,0,0,0,0,0.143124886741991,0,0.316379424718726,1.14378116354295,0,0.855877976067841,0,0,3.41757669408298,3.84351841630477,1.64937363283961,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1371 | |||
|description=CAGE_peak_at_chr12:91498048..91498066,- | |||
|id=chr12:91498048..91498066,- | |||
|ontology_enrichment_celltype=CL:0002620!5.53e-09!23;CL:0000057!3.61e-08!75;CL:0000055!1.14e-07!180;CL:0002334!5.16e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000153;3.30e-12;9!CL:0000447;3.30e-12;9!CL:0000499;2.03e-09;28!CL:0000134;1.25e-08;55!CL:0000135;2.03e-08;3!CL:0000388;2.03e-08;3!CL:0002334;5.83e-08;12!CL:0002580;1.15e-07;3!CL:0000214;1.62e-07;3!CL:0002504;3.11e-07;3!CL:1000279;3.11e-07;3!CL:1000280;3.11e-07;3!CL:0000048;3.53e-07;58!CL:0000723;4.43e-07;61!CL:0000034;5.14e-07;69!CL:0002579;6.47e-07;3!CL:0000327;8.28e-07;15!CL:0000138;9.00e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,3.11e-12,9;CL:0000447,3.11e-12,9;CL:0000499,1.82e-09,28;CL:0000135,2.09e-08,3;CL:0000388,2.09e-08,3;CL:0002334,5.94e-08,12;CL:0002580,1.12e-07,3;CL:0000214,1.66e-07,3;CL:0002504,2.41e-07,3;CL:1000279,2.41e-07,3;CL:1000280,2.41e-07,3;CL:0002579,4.69e-07,3;CL:0000327,8.02e-07,15;CL:0000058,8.41e-07,6;CL:0000138,8.41e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!8.79e-08!57;UBERON:0004457!1.62e-07!12;UBERON:0000042!1.62e-07!12;UBERON:0000478!3.38e-07!24;UBERON:0005631!9.00e-07!14;UBERON:0000158!9.00e-07!14;UBERON:0003688!9.90e-07!6;UBERON:0002358!9.90e-07!6;UBERON:0003684!9.90e-07!6;UBERON:0001178!9.90e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.56e-14;9!UBERON:0000042;1.56e-14;9!UBERON:0003688;7.41e-09;6!UBERON:0002358;7.41e-09;6!UBERON:0003684;7.41e-09;6!UBERON:0001178;7.41e-09;6!UBERON:0007846;2.03e-08;3!UBERON:0000043;2.03e-08;3!UBERON:0007845;2.03e-08;3!UBERON:0006915;1.62e-07;3!UBERON:0007616;1.62e-07;3!UBERON:0002217;1.62e-07;3!UBERON:0002018;1.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.49e-10,12;UBERON:0000042,1.49e-10,12;UBERON:0003688,6.29e-09,6;UBERON:0002358,6.29e-09,6;UBERON:0003684,6.29e-09,6;UBERON:0001178,6.29e-09,6;UBERON:0007846,2.09e-08,3;UBERON:0000043,2.09e-08,3;UBERON:0007845,2.09e-08,3;UBERON:0006915,1.66e-07,3;UBERON:0007616,1.66e-07,3;UBERON:0002217,1.66e-07,3;UBERON:0002018,1.66e-07,3 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.986680828671798,7.00513088471913,1.34088328328186,0,2.53299878168311,0,0,0,0,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0,6.86734389530676,2.50668955317945,10.8634889220618,0,15.5723158496843,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,4.84352016359927,4.27114777637135,1.27159140695737,0.900273288253207,0.515262646192195,3.60696756063881,2.79175284497385,0.337552664482532,0.194874010322397,0.757301322732344,2.94559675655358,0.323292113637624,6.03516307278244,1.91428986632517,0.67824236924195,0,0,0,0,0,0.348581828608555,0,0,0,0,3.21620469096443,0,0,2.16563844500876,0.591534000199219,0.842923450390509,0.964044119533928,0.441175890929576,0.871517776369625,0,1.21348177344148,1.56977172100277,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0.463721619900307,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.904902010304444,0,0,2.39344304926383,2.08014873822732,0,0,0,2.14466990487221,1.08524321078289,0.823240336780769,0,0.355391948742546,2.37585561880029,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.03985430765404,2.3195768543631,0.473107245101804,0.585707074963566,0,9.09630016223939,0,0.664225598535437,0,2.5196248195744,0,0,0,0,0,0,0,0.604780586659361,3.2254015016441,3.37616341233737,3.64858122762996,1.92208723883551,4.60536524160033,1.44768529029247,0,0.616838775210622,1.06537035187876,0.0821271560138091,0,0.813472649219715,0,0,0,0.68888668898764,0.728364672026868,1.70461739447251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0.366277859273374,0.660075999364704,0,0,1.6068392984416,0,0,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,1.5740617341532,0,0,0,0,0,0.143124886741991,0,0.316379424718726,1.14378116354295,0,0.855877976067841,0,0,3.41757669408298,3.84351841630477,1.64937363283961,0,0,0,0,0.243713489631284,0,0.818999468447914,3.11091950298168,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.430234056612155,0.196498082026242,0,1.41904425628239,2.53329162357197,3.29294892959902,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,6.83018765915069,0.614321404198464,0,0.140669416410513,0,0,0,0,0,0,0,0,3.73247505194169,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0.683652335082007,0,0,0,5.42301971544263,0.824378340616761,4.79731298416771,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.353830258013357,1.22206028986725,0,0,0,0,0,0,0,0,0,0.789168805698781,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0.85381197895741,4.39581141080687,0,0.343609788497747,0,0,0,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,1.39641200636127,0.916641696046735,2.15361907373044,0,0.858452096273142,0.223171457441873,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0,0,0.179287339332845,0,0.714695326373367,0,0.25426853765475,0,0.864221491201268,0.653174720218818,0,0,0,0,0,0,0,0,0,0,1.28144895081234,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0.447764408660622,1.63599316893057,0.554805861502613,2.08343305802598,2.26411111577318,1.77962244319307,0.228840068396924,0.151230923763239,1.70980920641059,0.443565449968902,0,0,0.465788870628778,0.829412415681711,3.98762571836992,0,1.80309130796662,1.52322084867518,2.44122439922797,1.09109195521536,0.537052785212442,1.85613503951397,0.398095888698616,0,4.46414416737631,3.36749488765919,0,0,0,0,0.226705925512272,0,0,0,0,1.09642024789354,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.737318726261158,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,1.70059936081346,0.619678821295011,0,0.636008701306837,0,0,6.34816698643231,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0,4.19520305013884,0,1.98916222116275,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0.535701835878287,0,0,0.227662191351298,1.77404740325278,0,0.857440047187092,0,0,0,0,0.627944742804112,0,0,1.82631744101899,0,0,0,0,0,0,3.20684545892101,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,8.25708688200537,0,0,0.83244063544298,0,0,0,0.154348316215889,0.87423824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| |||
|short_description=p@chr12:91498048..91498066,- | |||
}} |
Revision as of 00:55, 11 September 2013
Short description: | p@chr12:91498048..91498066, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:91498048..91498066, - |
Coexpression cluster: | C1371_tenocyte_Chondrocyte_placenta_Fibroblast_skin_mesenchymal_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 3.11e-12 | 9 |
carbohydrate secreting cell | 3.11e-12 | 9 |
stromal cell | 1.82e-09 | 28 |
fibrocyte | 2.09e-08 | 3 |
tendon cell | 2.09e-08 | 3 |
preadipocyte | 5.94e-08 | 12 |
preadipocyte of the breast | 1.12e-07 | 3 |
synovial cell | 1.66e-07 | 3 |
enteric smooth muscle cell | 2.41e-07 | 3 |
smooth muscle cell of large intestine | 2.41e-07 | 3 |
smooth muscle cell of colon | 2.41e-07 | 3 |
omentum preadipocyte | 4.69e-07 | 3 |
extracellular matrix secreting cell | 8.02e-07 | 15 |
chondroblast | 8.41e-07 | 6 |
chondrocyte | 8.41e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 1.49e-10 | 12 |
serous membrane | 1.49e-10 | 12 |
omentum | 6.29e-09 | 6 |
peritoneum | 6.29e-09 | 6 |
abdominal cavity | 6.29e-09 | 6 |
visceral peritoneum | 6.29e-09 | 6 |
dense regular connective tissue | 2.09e-08 | 3 |
tendon | 2.09e-08 | 3 |
regular connective tissue | 2.09e-08 | 3 |
stratified squamous epithelium | 1.66e-07 | 3 |
layer of synovial tissue | 1.66e-07 | 3 |
synovial joint | 1.66e-07 | 3 |
synovial membrane of synovial joint | 1.66e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.