FFCP PHASE1:Hg19::chr12:106729503..106729506,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C14|description=CAGE_peak_at_chr12:106729503..106729506,+|id=chr12:106729503..106729506,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;9.70e-12;2!CL:0000558;9.70e-12;2|ontology_enrichment_celltype_v019_2=CL:0000764,1.00e-11,2;CL:0000765,1.00e-11,2;CL:0000050,1.00e-11,2;CL:0000038,1.00e-11,2;CL:0000558,1.00e-11,2;CL:0000547,1.00e-11,2;CL:0000549,1.00e-11,2;CL:0000550,1.00e-11,2;CL:0000552,1.00e-11,2|ontology_enrichment_development_v019=UBERON:0004874;6.78e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.41e-08!115|ontology_enrichment_uberon_v019=UBERON:0000178;5.55e-17;15!UBERON:0000179;5.55e-17;15!UBERON:0000463;5.55e-17;15!UBERON:0002390;1.02e-08;32!UBERON:0001723;4.16e-08;3!UBERON:0001033;4.16e-08;3!UBERON:0000989;6.78e-07;1!UBERON:0008811;6.78e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.26e-17,15;UBERON:0000179,3.26e-17,15;UBERON:0000463,3.26e-17,15;UBERON:0007023,8.74e-10,114;UBERON:0001723,5.07e-08,3;UBERON:0001033,5.07e-08,3;UBERON:0010056,5.07e-08,3;UBERON:0000989,6.08e-07,1;UBERON:0008811,6.08e-07,1;UBERON:0006258,6.08e-07,1;UBERON:0005876,6.08e-07,1;UBERON:0004874,6.08e-07,1|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0.672325146451775,0,2.19093027116212,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,1.45398238779565,0.377875943688809,0,1.39457422143411,0,0.619412741790207,0,0,0,0,0,0,1.31769637679823,0.545812300115692,0.674170453335254,0.612167784741805,0.320929027076094,0,0.659702600373432,0.598390972864896,0.426224750532694,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,1.21079900526674,0,0.632924774881769,0.422510572623884,0.425208599930087,0,0.112328631146495,0.300353785683013,0,0.285012743741249,0,0,0,0.546138611262131,0.889509253863555,0,0,0.574752439954483,0.661044872784862,0,0.569212969109448,2.34894875748376,0.764546456250458,0,0,0,0,1.17903228824749,0,0.334372990781356,0.977766799900771,0.946895611469467,0,0.334231370655521,0.589211814949674,0.664601683750863,0.812411591295047,0.25618263945135,0.390178042679635,0.328875809207352,0.552700035571697,0,0.296573126324121,0.535081656179426,0,0,0.766440987203842,0.34362744548263,1.51811815211702,0.95569624297229,1.95325036156926,0.950452044448374,0.451725357233318,0,0,0.473554504088034,0.821127996921047,0.201606743224732,0,0.579297615531196,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0.368502951935304,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0,0,0.206105058476878,0,0.37223371266318,0.168776332241266,0.194874010322397,0,0.552299391853796,0.484938170456436,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,1.39310378409594,0.721879481669586,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0.8231480226628,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.577465791044295,0.925971025153221,0.380508304469197,0,0,0.246217006087397,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.714889968290738,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0,0,0,0.646882724578552,0,0.254094624222463,0,0,0.167516265334349,0,0,5.9832291840805,0,0.736148950314839,0,0,1.24782516918484,1.60586089917446,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0.434418072340414,0,0,0.206768026122887,0.862856803274467,0.533637789017222,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.128139149255701,0.511707249066704,0.804269605718038,1.48418066444991,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,1.31555925987561,2.61435451024901,0,0.656029291399411,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.290033387828457,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0,0,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr12:106729503..106729506,+ | |||
|id=chr12:106729503..106729506,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;9.70e-12;2!CL:0000558;9.70e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.00e-11,2;CL:0000765,1.00e-11,2;CL:0000050,1.00e-11,2;CL:0000038,1.00e-11,2;CL:0000558,1.00e-11,2;CL:0000547,1.00e-11,2;CL:0000549,1.00e-11,2;CL:0000550,1.00e-11,2;CL:0000552,1.00e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;6.78e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.55e-17;15!UBERON:0000179;5.55e-17;15!UBERON:0000463;5.55e-17;15!UBERON:0002390;1.02e-08;32!UBERON:0001723;4.16e-08;3!UBERON:0001033;4.16e-08;3!UBERON:0000989;6.78e-07;1!UBERON:0008811;6.78e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.26e-17,15;UBERON:0000179,3.26e-17,15;UBERON:0000463,3.26e-17,15;UBERON:0007023,8.74e-10,114;UBERON:0001723,5.07e-08,3;UBERON:0001033,5.07e-08,3;UBERON:0010056,5.07e-08,3;UBERON:0000989,6.08e-07,1;UBERON:0008811,6.08e-07,1;UBERON:0006258,6.08e-07,1;UBERON:0005876,6.08e-07,1;UBERON:0004874,6.08e-07,1 | |||
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| |||
|short_description=p@chr12:106729503..106729506,+ | |||
}} |
Revision as of 20:38, 10 September 2013
Short description: | p@chr12:106729503..106729506, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:106729503..106729506, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.00e-11 | 2 |
erythroblast | 1.00e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 1.00e-11 | 2 |
erythroid progenitor cell | 1.00e-11 | 2 |
reticulocyte | 1.00e-11 | 2 |
proerythroblast | 1.00e-11 | 2 |
basophilic erythroblast | 1.00e-11 | 2 |
polychromatophilic erythroblast | 1.00e-11 | 2 |
orthochromatic erythroblast | 1.00e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.26e-17 | 15 |
haemolymphatic fluid | 3.26e-17 | 15 |
organism substance | 3.26e-17 | 15 |
adult organism | 8.74e-10 | 114 |
tongue | 5.07e-08 | 3 |
gustatory system | 5.07e-08 | 3 |
future tongue | 5.07e-08 | 3 |
penis | 6.08e-07 | 1 |
intromittent organ | 6.08e-07 | 1 |
lateral plate mesenchyme | 6.08e-07 | 1 |
undifferentiated genital tubercle | 6.08e-07 | 1 |
somatopleure | 6.08e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.