FFCP PHASE1:Hg19::chr13:46756758..46756805,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3936|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6528|TSSclassifier=N|UniProt=P13796|association_with_transcript=-299bp_to_ENST00000323076,NM_002298,uc001vba.3_5end|description=CAGE_peak_11_at_LCP1_5end|id=chr13:46756758..46756805,-|ontology_enrichment_celltype=CL:0000988!1.78e-13!182;CL:0000037!3.73e-13!172;CL:0000566!3.73e-13!172;CL:0002032!1.73e-11!165;CL:0000837!1.73e-11!165;CL:0000945!2.55e-11!24;CL:0000826!2.55e-11!24;CL:0000542!1.25e-10!53;CL:0000051!1.25e-10!53;CL:0000838!6.40e-10!52;CL:0000738!2.11e-09!140;CL:0002322!1.04e-07!5;CL:0002031!6.03e-07!124|ontology_enrichment_celltype_v019=CL:0000945;9.77e-10;24!CL:0000039;2.17e-07;7!CL:0000586;2.17e-07;7!CL:1001319;6.23e-07;1!CL:1000600;6.23e-07;1|ontology_enrichment_celltype_v019_2=CL:0000945,9.45e-10,24;CL:0000826,9.45e-10,24;CL:0000039,1.78e-07,7;CL:0000586,1.78e-07,7;CL:1001319,5.90e-07,1;CL:1000600,5.90e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2531!1.10e-17!51;DOID:0060083!1.10e-17!51;DOID:0060058!1.36e-11!10;DOID:1240!7.34e-11!39;DOID:0050686!1.74e-10!137;DOID:162!3.12e-09!235;DOID:14566!1.05e-08!239;DOID:1749!1.72e-07!14|ontology_enrichment_disease_v019=DOID:0060058;1.14e-12;10!DOID:1749;3.21e-09;14!DOID:1799;6.23e-07;1!DOID:10165;6.23e-07;1!DOID:1798;6.23e-07;1!DOID:2355;9.40e-07;1|ontology_enrichment_disease_v019_2=DOID:0060058,8.08e-13,10;DOID:1749,3.42e-09,14;DOID:305,3.43e-09,106;DOID:162,2.46e-08,235;DOID:14566,4.72e-08,239;DOID:0050687,6.94e-08,143;DOID:1799,6.23e-07,1;DOID:10165,6.23e-07,1;DOID:1798,6.23e-07,1;DOID:2355,9.15e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002370;7.71e-12;2!UBERON:0005058;7.71e-12;2!UBERON:0009113;7.71e-12;2!UBERON:0004177;4.88e-10;5!UBERON:0005057;4.88e-10;5!UBERON:0006947;3.36e-08;3!UBERON:0004054;3.36e-08;3!UBERON:0003135;5.07e-08;11!UBERON:0001301;5.57e-07;1!UBERON:0004645;6.23e-07;1!UBERON:0001256;6.23e-07;1!UBERON:0001259;6.23e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000974,1.14e-08,10;UBERON:0006947,3.55e-08,3;UBERON:0004054,3.55e-08,3;UBERON:0003135,4.89e-08,11;UBERON:0004177,2.42e-07,7;UBERON:0005057,2.42e-07,7;UBERON:0001301,5.58e-07,1;UBERON:0004645,5.90e-07,1;UBERON:0001256,5.90e-07,1;UBERON:0001259,5.90e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06316195519468,2.29881650459848,2.51874500203774,0,0.383829398097213,0,0,0,0,0.774672005803016,1.42169232487422,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0.39783335439818,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0.289803085735052,0.741432815810302,0.535081656179426,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43094374583205,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.365921118388786,0.265059536642971,2.67246068599892,0.414644220061482,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16426079513703,0.290633938513962,1.15014803749563,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,5.3908847515827,0.371606350251437,0.432807638929335,0.924843963529383,0.797131363644112,0,0.191505370132367,0,0,0,0.228234679033192,0.156679895773023,0,0,0.1605880751037,0.201799707191048,0,0,0,0.223676107892416,0.333698283423817,0.390776190804081,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0.503865495708552,0,0.369254416383208,0,0.269605053441981,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0.568967241427498,1.27126825146383,0,1.03423011972439,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0,0.46112780877612,2.96200226552248,0,0,0,0,3.06579894587209,0,0.166211681900156,0,0,0.503464760927528,0,0.158936578980379,0,0,0.565412285735763,0,0,0,0,0.296521128680622,0.247127877893006,0.208843899010911,0,0,0,0.364909578431332,1.36965233252463,0,2.36750641709634,0,0,0,0.751617097072463,1.03688191397247,0,0,0,0,0,0,0.173559738335131,0.3919695896575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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3936 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6528 | |||
|TSSclassifier=N | |||
|UniProt=P13796 | |||
|association_with_transcript=-299bp_to_ENST00000323076,NM_002298,uc001vba.3_5end | |||
|description=CAGE_peak_11_at_LCP1_5end | |||
|id=chr13:46756758..46756805,- | |||
|ontology_enrichment_celltype=CL:0000988!1.78e-13!182;CL:0000037!3.73e-13!172;CL:0000566!3.73e-13!172;CL:0002032!1.73e-11!165;CL:0000837!1.73e-11!165;CL:0000945!2.55e-11!24;CL:0000826!2.55e-11!24;CL:0000542!1.25e-10!53;CL:0000051!1.25e-10!53;CL:0000838!6.40e-10!52;CL:0000738!2.11e-09!140;CL:0002322!1.04e-07!5;CL:0002031!6.03e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.77e-10;24!CL:0000039;2.17e-07;7!CL:0000586;2.17e-07;7!CL:1001319;6.23e-07;1!CL:1000600;6.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.45e-10,24;CL:0000826,9.45e-10,24;CL:0000039,1.78e-07,7;CL:0000586,1.78e-07,7;CL:1001319,5.90e-07,1;CL:1000600,5.90e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.10e-17!51;DOID:0060083!1.10e-17!51;DOID:0060058!1.36e-11!10;DOID:1240!7.34e-11!39;DOID:0050686!1.74e-10!137;DOID:162!3.12e-09!235;DOID:14566!1.05e-08!239;DOID:1749!1.72e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.14e-12;10!DOID:1749;3.21e-09;14!DOID:1799;6.23e-07;1!DOID:10165;6.23e-07;1!DOID:1798;6.23e-07;1!DOID:2355;9.40e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.08e-13,10;DOID:1749,3.42e-09,14;DOID:305,3.43e-09,106;DOID:162,2.46e-08,235;DOID:14566,4.72e-08,239;DOID:0050687,6.94e-08,143;DOID:1799,6.23e-07,1;DOID:10165,6.23e-07,1;DOID:1798,6.23e-07,1;DOID:2355,9.15e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.71e-12;2!UBERON:0005058;7.71e-12;2!UBERON:0009113;7.71e-12;2!UBERON:0004177;4.88e-10;5!UBERON:0005057;4.88e-10;5!UBERON:0006947;3.36e-08;3!UBERON:0004054;3.36e-08;3!UBERON:0003135;5.07e-08;11!UBERON:0001301;5.57e-07;1!UBERON:0004645;6.23e-07;1!UBERON:0001256;6.23e-07;1!UBERON:0001259;6.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000974,1.14e-08,10;UBERON:0006947,3.55e-08,3;UBERON:0004054,3.55e-08,3;UBERON:0003135,4.89e-08,11;UBERON:0004177,2.42e-07,7;UBERON:0005057,2.42e-07,7;UBERON:0001301,5.58e-07,1;UBERON:0004645,5.90e-07,1;UBERON:0001256,5.90e-07,1;UBERON:0001259,5.90e-07,1 | |||
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|short_description=p11@LCP1 | |||
}} |
Revision as of 02:24, 11 September 2013
Short description: | p11@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_LCP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -299bp_to_ENST00000323076, NM_002298, uc001vba.3_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | P13796 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.45e-10 | 24 |
pro-B cell | 9.45e-10 | 24 |
germ line cell | 1.78e-07 | 7 |
germ cell | 1.78e-07 | 7 |
bladder cell | 5.90e-07 | 1 |
lower urinary tract cell | 5.90e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neck | 1.14e-08 | 10 |
male genital duct | 3.55e-08 | 3 |
internal male genitalia | 3.55e-08 | 3 |
male reproductive organ | 4.89e-08 | 11 |
hemopoietic organ | 2.42e-07 | 7 |
immune organ | 2.42e-07 | 7 |
epididymis | 5.58e-07 | 1 |
urinary bladder urothelium | 5.90e-07 | 1 |
wall of urinary bladder | 5.90e-07 | 1 |
mucosa of urinary bladder | 5.90e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.08e-13 | 10 |
squamous cell carcinoma | 3.42e-09 | 14 |
carcinoma | 3.43e-09 | 106 |
cancer | 2.46e-08 | 235 |
disease of cellular proliferation | 4.72e-08 | 239 |
cell type cancer | 6.94e-08 | 143 |
islet cell tumor | 6.23e-07 | 1 |
endocrine pancreas cancer | 6.23e-07 | 1 |
pancreatic endocrine carcinoma | 6.23e-07 | 1 |
anemia | 9.15e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.