FFCP PHASE1:Hg19::chr13:50571160..50571229,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10206|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9976|TSSclassifier=S|UniProt=O60858|association_with_transcript=0bp_to_ENST00000356017,ENST00000378182,ENST00000457662_5end|description=CAGE_peak_1_at_TRIM13_5end|id=chr13:50571160..50571229,+|ontology_enrichment_celltype=CL:0000037!1.33e-08!172;CL:0000566!1.33e-08!172;CL:0002032!4.25e-08!165;CL:0000837!4.25e-08!165;CL:0000763!1.38e-07!112;CL:0000049!1.38e-07!112|ontology_enrichment_celltype_v019=CL:0000236;9.21e-08;13|ontology_enrichment_celltype_v019_2=CL:0000037,1.73e-09,168;CL:0002032,5.74e-09,161;CL:0000837,5.74e-09,161;CL:0000763,1.26e-08,108;CL:0000049,1.26e-08,108;CL:0000988,4.50e-07,177;CL:0002031,8.62e-07,120|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.33e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.82e-07,114|phase1_expression=17.2594460307029,15.2011371962598,17.0554828956125,25.0183245882826,12.0679495495368,20.0637860543085,10.1319951267324,12.6343974685366,9.14149698699435,9.33788958705734,9.07141518364156,12.8880409556802,9.75937819445278,20.6689809443278,28.1687769368728,18.1527789541979,15.6700577286234,17.527442169297,23.4207743419443,9.72656358806625,9.58803248847989,4.07491137921514,18.8915751506497,19.4361683603496,14.1863182742127,13.6779996288833,11.6582837018923,12.515014228875,10.6208354749204,11.1310525448192,13.1593704818665,19.3078457140575,8.73497164456925,17.7481924880058,24.5571025839556,16.7759694335157,24.3688364647923,14.9578760303607,25.2686003812379,21.7010870715852,14.3305903513552,18.7858326291008,18.2878653020272,23.8453111598486,20.7831769028845,19.8918930174009,19.2916100631718,15.2132118568076,22.2988587044475,11.7953880852082,15.1134816852169,17.9726494715325,18.6162667597774,22.5919639254339,27.0852973188684,24.4715041405386,20.7408674043963,21.7981779911732,17.4467818651414,14.7627352455003,12.1474053901818,18.4716728104561,16.7549472402171,17.0489900213078,20.3146467040009,15.8867862913519,22.4216009638407,18.3411525637423,31.8104580236323,21.0673179363963,21.1889825921679,20.2552699793161,25.0005286078299,13.5203383239643,15.0949052975181,13.2084946670277,12.243820794968,12.6148589986865,14.3045772160401,16.2457263932512,18.8970843339136,11.1425133796427,29.9193615584249,43.6910889009705,39.1384071699964,39.6859106986852,47.6471224572855,40.8074232367683,46.2731410949403,46.7486339722328,19.3532409497212,22.9022503854666,25.9945795125156,22.4691258584344,39.7961079716891,19.2270381885806,14.163103448196,10.6112905942274,11.308082444973,18.7248874837559,15.3183465317787,17.0441210064504,13.6378709885538,18.8283672135943,18.8547780783896,14.621237042519,20.5810936461412,14.602410448727,15.7371810547453,19.7325485524411,20.1735512983669,20.5760190871887,15.5700891320163,9.36392898313996,13.589618094647,18.2428041743082,16.0952607312807,13.7450978193052,17.7113784413652,18.7953594451217,20.8346705234054,19.0090408889675,23.3391434570548,22.9096033966409,17.4903017173284,22.2570616921376,13.1380479507367,10.4835506476861,12.8371293976084,9.26876184849914,4.87613732627923,11.4019146149618,15.8549576685978,10.1202962667679,13.536123587169,15.9331170856906,25.4491503056352,18.4921250715002,21.8375427648997,20.3991045665559,17.7426267100115,17.0272798147026,2.91436230634034,7.78647329847302,16.5519170763889,20.0249197894157,22.8687692092448,25.7569874249769,33.7476997360275,31.9453451143426,16.0997549967031,13.763753521698,11.4556365530506,14.1326985481002,9.64848703282784,13.4807840550633,16.0926124233344,24.0327586027476,22.7690408119495,22.7610016679976,16.9188313185842,17.4862584315258,19.7690266614017,24.6334263831732,25.1144003843345,16.5204497325548,12.3491154944393,11.9368169312322,16.8648301212472,16.1375162126582,15.755349978015,15.8136500923276,27.1446184903828,5.66922267785295,15.4061305025549,14.1826173064329,13.7705548045748,21.2259099354122,10.6400514659507,11.2135520028461,13.8773694448616,11.3467072271894,14.9381296991888,19.9371794663138,20.1058140829554,15.1357427644931,21.89468513024,4.21778577300834,16.2323239951767,9.69802096625564,18.8305337495269,15.8536573169083,13.9210732156593,14.0450806702249,23.2735755230578,17.6881416928946,19.838549985747,23.7600571456411,16.3196173323848,2.73048408581408,5.74894513452991,13.4668891163253,16.6407631429712,16.0697186980826,12.2913733846635,12.5659996277598,14.5730917139399,17.1282596571632,14.8893397621755,19.8608371601268,19.0738711043606,12.9039171316293,18.8586128506343,14.6855107826009,15.8199327881851,12.658224918095,14.8104247845022,19.6898343910409,14.6359338841256,26.9948914887416,19.1705179958972,13.8030374571867,13.90396856946,19.9058678758196,23.7289124914026,20.6499308680083,16.9543451520138,23.0601796879384,20.9149097165133,20.9395331131048,26.2413684910654,40.5124868574171,9.38697193978896,17.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322,10.464967988426,24.1704615563374,31.1131662389564,6.18947658623362,13.2739551945665,29.0684215470263,7.99539403814589,16.1797892357578,12.9622100905894,21.0050059812991,21.0902944232231,29.585900930838,10.3655539959568,18.0449122521319,16.5012193212358,10.2939390602677,10.5346823777338,12.3513205100492,10.4313776695919,22.640428035642,21.5602763200134,19.6375228917488,21.1413893338867,11.4225703520737,66.7616556220777,25.3932883447392,9.67187047233553,17.5626738879939,15.5745562364564,16.5278016533953,13.1118686356435,17.4843931395783,4.58949733838918,10.6886962106224,12.9571808344131,19.0537729862205,13.6401656792831,14.7380271585898,24.8750831837634,19.5488362178982,21.963100135801,33.8051492678511,31.648565819643,30.4786847192662,8.07349410580417,24.2495673039808,26.6794689424849,20.4653743023144,33.5388635063575,23.0344021309889,22.4490502879077,33.9313563676934,9.84979550192791,9.49873378311668,5.7921684686082,18.5938168360635,16.4248659682418,22.4924257296474,36.2137598701007,17.9754329030088,21.7375697078308,15.7078561228584|short_description=p1@TRIM13}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10206 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9976 | |||
|TSSclassifier=S | |||
|UniProt=O60858 | |||
|association_with_transcript=0bp_to_ENST00000356017,ENST00000378182,ENST00000457662_5end | |||
|description=CAGE_peak_1_at_TRIM13_5end | |||
|id=chr13:50571160..50571229,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.33e-08!172;CL:0000566!1.33e-08!172;CL:0002032!4.25e-08!165;CL:0000837!4.25e-08!165;CL:0000763!1.38e-07!112;CL:0000049!1.38e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.21e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.73e-09,168;CL:0002032,5.74e-09,161;CL:0000837,5.74e-09,161;CL:0000763,1.26e-08,108;CL:0000049,1.26e-08,108;CL:0000988,4.50e-07,177;CL:0002031,8.62e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.33e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.82e-07,114 | |||
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| |||
|short_description=p1@TRIM13 | |||
}} |
Revision as of 02:32, 11 September 2013
Short description: | p1@TRIM13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TRIM13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000356017, ENST00000378182, ENST00000457662_5end |
EntrezGene: | TRIM13 |
HGNC: | 9976 |
UniProt: | O60858 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.73e-09 | 168 |
hematopoietic oligopotent progenitor cell | 5.74e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.74e-09 | 161 |
myeloid cell | 1.26e-08 | 108 |
common myeloid progenitor | 1.26e-08 | 108 |
hematopoietic cell | 4.50e-07 | 177 |
hematopoietic lineage restricted progenitor cell | 8.62e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.82e-07 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.