FFCP PHASE1:Hg19::chr14:85996507..85996521,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23768|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3761|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000557419_5end|coexpression_cluster_id=C2318|description=CAGE_peak_3_at_FLRT2_5end|id=chr14:85996507..85996521,+|ontology_enrichment_celltype=CL:0000220!4.75e-12!246;CL:0002139!5.96e-12!24;CL:0002321!1.42e-11!248;CL:0000213!1.75e-11!57;CL:0000215!1.75e-11!57;CL:0000115!9.32e-11!35;CL:0000057!4.73e-10!75;CL:0000222!3.42e-09!119;CL:0002078!7.81e-09!44;CL:0000071!7.20e-08!18;CL:0002546!7.20e-08!18;CL:0000076!8.62e-08!62;CL:0000055!1.33e-07!180|ontology_enrichment_celltype_v019=CL:0002139;1.90e-15;24!CL:0000115;4.70e-12;36!CL:0000071;5.95e-10;18!CL:0002078;6.55e-09;45!CL:0000213;1.85e-08;58!CL:0000215;1.85e-08;58!CL:0002138;1.71e-07;6|ontology_enrichment_celltype_v019_2=CL:0002139,7.15e-16,24;CL:0000115,4.72e-15,36;CL:0000213,1.14e-14,58;CL:0000215,1.14e-14,58;CL:0002078,8.75e-13,45;CL:0002321,4.16e-11,250;CL:0000071,2.36e-10,18;CL:0002546,2.36e-10,18;CL:0000076,1.67e-09,63;CL:0005020,1.82e-07,6;CL:0002138,1.82e-07,6;CL:0005022,1.82e-07,6;CL:0000066,2.36e-07,253|ontology_enrichment_development_v019=CL:0002546;5.95e-10;18!CL:0005022;1.71e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!8.31e-16!365;UBERON:0000468!3.04e-15!659;UBERON:0000924!1.13e-14!173;UBERON:0006601!1.13e-14!173;UBERON:0000119!1.30e-13!312;UBERON:0000483!3.16e-13!309;UBERON:0004121!4.82e-13!169;UBERON:0000477!6.45e-13!286;UBERON:0002049!1.98e-12!79;UBERON:0007798!1.98e-12!79;UBERON:0000033!4.16e-12!123;UBERON:0000467!6.65e-12!625;UBERON:0000480!1.02e-11!626;UBERON:0000153!1.42e-11!129;UBERON:0007811!1.42e-11!129;UBERON:0004111!3.43e-11!241;UBERON:0000055!5.60e-10!69;UBERON:0003102!3.57e-09!95;UBERON:0001950!3.61e-09!20;UBERON:0004872!4.24e-09!84;UBERON:0000481!5.45e-09!347;UBERON:0004535!7.50e-09!110;UBERON:0002619!2.35e-08!22;UBERON:0001009!3.11e-08!113;UBERON:0000922!4.14e-08!612;UBERON:0001986!7.20e-08!18;UBERON:0004638!7.20e-08!18;UBERON:0004852!7.20e-08!18;UBERON:0002097!9.56e-08!40;UBERON:0000923!9.59e-08!604;UBERON:0005291!9.59e-08!604;UBERON:0006598!9.59e-08!604;UBERON:0002532!9.59e-08!604;UBERON:0001981!1.12e-07!60;UBERON:0007500!1.12e-07!60;UBERON:0004537!1.12e-07!60;UBERON:0006965!1.12e-07!60;UBERON:0002050!1.35e-07!605;UBERON:0005423!1.35e-07!605;UBERON:0001444!1.96e-07!48;UBERON:0001869!3.16e-07!32;UBERON:0005743!3.39e-07!86;UBERON:0006914!3.91e-07!25;UBERON:0002346!4.90e-07!90;UBERON:0001893!5.15e-07!34;UBERON:0002199!5.22e-07!45;UBERON:0002416!5.22e-07!45;UBERON:0000025!5.74e-07!194;UBERON:0000956!9.48e-07!25;UBERON:0000203!9.48e-07!25|ontology_enrichment_uberon_v019=UBERON:0001950;4.31e-11;20!UBERON:0004638;5.95e-10;18!UBERON:0001986;5.95e-10;18!UBERON:0004852;5.95e-10;18!UBERON:0006914;8.89e-10;25!UBERON:0002619;1.45e-09;22!UBERON:0000487;2.65e-08;22!UBERON:0000956;9.42e-08;25!UBERON:0000203;9.42e-08;25|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.55e-11,20;UBERON:0004638,2.36e-10,18;UBERON:0001986,2.36e-10,18;UBERON:0004852,2.36e-10,18;UBERON:0004121,4.46e-10,171;UBERON:0000924,4.46e-10,171;UBERON:0006601,4.46e-10,171;UBERON:0006914,4.55e-10,25;UBERON:0002619,2.38e-09,22;UBERON:0000487,1.32e-08,22;UBERON:0003102,4.75e-08,99;UBERON:0002049,7.98e-08,78;UBERON:0007798,7.98e-08,78;UBERON:0002097,8.85e-08,41;UBERON:0000956,1.42e-07,25;UBERON:0000203,1.42e-07,25;UBERON:0000055,6.98e-07,68;UBERON:0001869,8.04e-07,32;UBERON:0002199,9.75e-07,46;UBERON:0002416,9.75e-07,46|phase1_expression=1.09007027562334,0.642301571672949,0.845726424575827,3.00219895059391,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0.602694528023977,2.19093027116212,0.975865597581014,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,6.43594857135249,8.73497164456925,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0.697287110717054,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.15076305659177,3.61439152384566,0,2.60723734129483,2.3858578411533,1.94653948121054,0.378139268656271,0.221729397462564,0.87834785693126,1.17881167947941,0.728590576585084,1.11235332835329,0,0.174129737299267,0.132957960518865,0,0,0,1.78886166630035,0,3.81854551768354,4.52246353539208,2.51699661725944,2.75118041940067,1.67195973229448,9.04458657092651,14.2306505074684,20.0832367658802,20.9471244896756,16.7259863258073,27.5790125029432,5.8826092855339,7.29127753093584,5.71518261018111,7.18493992403743,2.70267553159973,1.53316637465883,1.89853131913626,1.09921046358244,0,0,0.436094052142534,1.98788780678127,1.13967460498122,1.45650098894541,3.15520282823695,0.709336764396714,1.12135520028461,2.1349799145941,5.18001851676036,2.17847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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23768 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3761 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000557419_5end | |||
|coexpression_cluster_id=C2318 | |||
|description=CAGE_peak_3_at_FLRT2_5end | |||
|id=chr14:85996507..85996521,+ | |||
|ontology_enrichment_celltype=CL:0000220!4.75e-12!246;CL:0002139!5.96e-12!24;CL:0002321!1.42e-11!248;CL:0000213!1.75e-11!57;CL:0000215!1.75e-11!57;CL:0000115!9.32e-11!35;CL:0000057!4.73e-10!75;CL:0000222!3.42e-09!119;CL:0002078!7.81e-09!44;CL:0000071!7.20e-08!18;CL:0002546!7.20e-08!18;CL:0000076!8.62e-08!62;CL:0000055!1.33e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.90e-15;24!CL:0000115;4.70e-12;36!CL:0000071;5.95e-10;18!CL:0002078;6.55e-09;45!CL:0000213;1.85e-08;58!CL:0000215;1.85e-08;58!CL:0002138;1.71e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.15e-16,24;CL:0000115,4.72e-15,36;CL:0000213,1.14e-14,58;CL:0000215,1.14e-14,58;CL:0002078,8.75e-13,45;CL:0002321,4.16e-11,250;CL:0000071,2.36e-10,18;CL:0002546,2.36e-10,18;CL:0000076,1.67e-09,63;CL:0005020,1.82e-07,6;CL:0002138,1.82e-07,6;CL:0005022,1.82e-07,6;CL:0000066,2.36e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;5.95e-10;18!CL:0005022;1.71e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;4.31e-11;20!UBERON:0004638;5.95e-10;18!UBERON:0001986;5.95e-10;18!UBERON:0004852;5.95e-10;18!UBERON:0006914;8.89e-10;25!UBERON:0002619;1.45e-09;22!UBERON:0000487;2.65e-08;22!UBERON:0000956;9.42e-08;25!UBERON:0000203;9.42e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.55e-11,20;UBERON:0004638,2.36e-10,18;UBERON:0001986,2.36e-10,18;UBERON:0004852,2.36e-10,18;UBERON:0004121,4.46e-10,171;UBERON:0000924,4.46e-10,171;UBERON:0006601,4.46e-10,171;UBERON:0006914,4.55e-10,25;UBERON:0002619,2.38e-09,22;UBERON:0000487,1.32e-08,22;UBERON:0003102,4.75e-08,99;UBERON:0002049,7.98e-08,78;UBERON:0007798,7.98e-08,78;UBERON:0002097,8.85e-08,41;UBERON:0000956,1.42e-07,25;UBERON:0000203,1.42e-07,25;UBERON:0000055,6.98e-07,68;UBERON:0001869,8.04e-07,32;UBERON:0002199,9.75e-07,46;UBERON:0002416,9.75e-07,46 | |||
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| |||
|short_description=p3@FLRT2 | |||
}} |
Revision as of 05:48, 11 September 2013
Short description: | p3@FLRT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FLRT2_5end |
Coexpression cluster: | C2318_extraskeletal_adrenal_Lymphatic_Endothelial_leiomyoblastoma_Preadipocyte_occipital |
Association with transcript: | 0bp_to_ENST00000557419_5end |
EntrezGene: | FLRT2 |
HGNC: | 3761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.15e-16 | 24 |
endothelial cell | 4.72e-15 | 36 |
lining cell | 1.14e-14 | 58 |
barrier cell | 1.14e-14 | 58 |
meso-epithelial cell | 8.75e-13 | 45 |
embryonic cell | 4.16e-11 | 250 |
blood vessel endothelial cell | 2.36e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.36e-10 | 18 |
squamous epithelial cell | 1.67e-09 | 63 |
lymphangioblast | 1.82e-07 | 6 |
endothelial cell of lymphatic vessel | 1.82e-07 | 6 |
vascular lymphangioblast | 1.82e-07 | 6 |
epithelial cell | 2.36e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
neocortex | 7.55e-11 | 20 |
blood vessel endothelium | 2.36e-10 | 18 |
endothelium | 2.36e-10 | 18 |
cardiovascular system endothelium | 2.36e-10 | 18 |
ectoderm-derived structure | 4.46e-10 | 171 |
ectoderm | 4.46e-10 | 171 |
presumptive ectoderm | 4.46e-10 | 171 |
squamous epithelium | 4.55e-10 | 25 |
regional part of cerebral cortex | 2.38e-09 | 22 |
simple squamous epithelium | 1.32e-08 | 22 |
surface structure | 4.75e-08 | 99 |
vasculature | 7.98e-08 | 78 |
vascular system | 7.98e-08 | 78 |
skin of body | 8.85e-08 | 41 |
cerebral cortex | 1.42e-07 | 25 |
pallium | 1.42e-07 | 25 |
vessel | 6.98e-07 | 68 |
cerebral hemisphere | 8.04e-07 | 32 |
integument | 9.75e-07 | 46 |
integumental system | 9.75e-07 | 46 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.