FFCP PHASE1:Hg19::chr15:39889273..39889278,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C453|description=CAGE_peak_at_chr15:39889273..39889278,+|id=chr15:39889273..39889278,+|ontology_enrichment_celltype=CL:0002139!8.77e-11!24;CL:0000115!6.53e-08!35;CL:0002078!9.21e-08!44;CL:0000057!2.32e-07!75;CL:0000071!7.73e-07!18;CL:0002546!7.73e-07!18|ontology_enrichment_celltype_v019=CL:0000197;5.65e-18;6!CL:0000098;5.65e-18;6!CL:0002167;5.65e-18;6!CL:0002544;5.64e-11;6!CL:0000071;3.25e-09;18!CL:0002174;7.85e-08;1!CL:0000501;7.85e-08;1!CL:1000413;1.82e-07;9!CL:0002139;7.50e-07;24|ontology_enrichment_celltype_v019_2=CL:0000197,4.74e-18,6;CL:0000098,4.74e-18,6;CL:0002167,4.74e-18,6;CL:0002544,5.11e-11,6;CL:0000071,3.20e-09,18;CL:0002546,3.20e-09,18;CL:0002174,6.19e-08,1;CL:0000501,6.19e-08,1;CL:1000413,1.71e-07,9;CL:0002139,7.41e-07,24|ontology_enrichment_development_v019=CL:0002546;3.25e-09;18!UBERON:0000358;3.57e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;2.61e-14;2!DOID:1192;1.92e-10;3!DOID:3571;1.65e-08;1!DOID:3369;1.84e-08;1!DOID:4235;2.04e-08;1|ontology_enrichment_disease_v019_2=DOID:3307,1.57e-14,2;DOID:1192,1.92e-10,3;DOID:3571,1.65e-08,1;DOID:3369,1.77e-08,1;DOID:4235,2.04e-08,1|ontology_enrichment_uberon=UBERON:0000055!9.89e-10!69;UBERON:0002049!1.78e-08!79;UBERON:0007798!1.78e-08!79;UBERON:0001981!5.05e-07!60;UBERON:0007500!5.05e-07!60;UBERON:0004537!5.05e-07!60;UBERON:0006965!5.05e-07!60;UBERON:0004872!6.05e-07!84;UBERON:0001986!7.73e-07!18;UBERON:0004638!7.73e-07!18;UBERON:0004852!7.73e-07!18|ontology_enrichment_uberon_v019=UBERON:0004638;3.25e-09;18!UBERON:0001986;3.25e-09;18!UBERON:0004852;3.25e-09;18!UBERON:0007195;3.57e-08;1!UBERON:0000487;1.70e-07;22!UBERON:0003915;1.82e-07;9!UBERON:0004700;1.82e-07;9!UBERON:0001917;1.82e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.20e-09,18;UBERON:0001986,3.20e-09,18;UBERON:0004852,3.20e-09,18;UBERON:0007195,3.83e-08,1;UBERON:0000487,1.68e-07,22;UBERON:0003915,1.71e-07,9;UBERON:0004700,1.71e-07,9;UBERON:0001917,1.71e-07,9|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,2.19093027116212,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.697287110717054,0,0,0.863077176966451,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,3.47140501607594,3.95715559346807,0,0.275118041940067,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0,1.52054421143703,0,0.735326160691737,2.43042584364528,0,1.12264686313085,0.563057402416611,0,0.949265659568129,0,0,0,0,7.45457927542978,0,0.264818361626438,0,0.354668382198357,0.560677600142307,1.06748995729705,0.49333509683432,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,1.18800285728205,2.22540236350701,0,0,0,0,0,2.63386572528503,0.919463387397059,4.05642759047811,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0.309157587715317,0.257640540045629,0.744467425326359,0,0.194874010322397,0.757301322732344,0.368199594569197,0,0,0,0.169560592310488,0.193260853163297,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07970861530807,1.96271887676878,1.73472656537328,2.10854546986884,0.902838299183157,0,0,0,0,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0,0.496215615637554,0.767309866440312,0.280660094433074,0.128139149255701,0.511707249066704,0.965123526861645,0,0,0.355123450626254,0.0821271560138091,0,0,0,0.40101294060657,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0.960950336825531,0.255225424989168,0.10115778085555,0,0,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0.429374660225974,0,0,0.190630193923825,0,0,0,0,0.539617372749944,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0.655894752046633,0.405820753925408,1.239293992399,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0.96247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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C453 | |||
|description=CAGE_peak_at_chr15:39889273..39889278,+ | |||
|id=chr15:39889273..39889278,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.77e-11!24;CL:0000115!6.53e-08!35;CL:0002078!9.21e-08!44;CL:0000057!2.32e-07!75;CL:0000071!7.73e-07!18;CL:0002546!7.73e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000197;5.65e-18;6!CL:0000098;5.65e-18;6!CL:0002167;5.65e-18;6!CL:0002544;5.64e-11;6!CL:0000071;3.25e-09;18!CL:0002174;7.85e-08;1!CL:0000501;7.85e-08;1!CL:1000413;1.82e-07;9!CL:0002139;7.50e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,4.74e-18,6;CL:0000098,4.74e-18,6;CL:0002167,4.74e-18,6;CL:0002544,5.11e-11,6;CL:0000071,3.20e-09,18;CL:0002546,3.20e-09,18;CL:0002174,6.19e-08,1;CL:0000501,6.19e-08,1;CL:1000413,1.71e-07,9;CL:0002139,7.41e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002546;3.25e-09;18!UBERON:0000358;3.57e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.61e-14;2!DOID:1192;1.92e-10;3!DOID:3571;1.65e-08;1!DOID:3369;1.84e-08;1!DOID:4235;2.04e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.57e-14,2;DOID:1192,1.92e-10,3;DOID:3571,1.65e-08,1;DOID:3369,1.77e-08,1;DOID:4235,2.04e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!9.89e-10!69;UBERON:0002049!1.78e-08!79;UBERON:0007798!1.78e-08!79;UBERON:0001981!5.05e-07!60;UBERON:0007500!5.05e-07!60;UBERON:0004537!5.05e-07!60;UBERON:0006965!5.05e-07!60;UBERON:0004872!6.05e-07!84;UBERON:0001986!7.73e-07!18;UBERON:0004638!7.73e-07!18;UBERON:0004852!7.73e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.25e-09;18!UBERON:0001986;3.25e-09;18!UBERON:0004852;3.25e-09;18!UBERON:0007195;3.57e-08;1!UBERON:0000487;1.70e-07;22!UBERON:0003915;1.82e-07;9!UBERON:0004700;1.82e-07;9!UBERON:0001917;1.82e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.20e-09,18;UBERON:0001986,3.20e-09,18;UBERON:0004852,3.20e-09,18;UBERON:0007195,3.83e-08,1;UBERON:0000487,1.68e-07,22;UBERON:0003915,1.71e-07,9;UBERON:0004700,1.71e-07,9;UBERON:0001917,1.71e-07,9 | |||
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|short_description=p@chr15:39889273..39889278,+ | |||
}} |
Revision as of 06:52, 11 September 2013
Short description: | p@chr15:39889273..39889278, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:39889273..39889278, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 4.74e-18 | 6 |
sensory epithelial cell | 4.74e-18 | 6 |
olfactory epithelial cell | 4.74e-18 | 6 |
aortic endothelial cell | 5.11e-11 | 6 |
blood vessel endothelial cell | 3.20e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.20e-09 | 18 |
follicular cell of ovary | 6.19e-08 | 1 |
granulosa cell | 6.19e-08 | 1 |
endothelial cell of artery | 1.71e-07 | 9 |
endothelial cell of vascular tree | 7.41e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.20e-09 | 18 |
endothelium | 3.20e-09 | 18 |
cardiovascular system endothelium | 3.20e-09 | 18 |
stroma of bone marrow | 3.83e-08 | 1 |
simple squamous epithelium | 1.68e-07 | 22 |
endothelial tube | 1.71e-07 | 9 |
arterial system endothelium | 1.71e-07 | 9 |
endothelium of artery | 1.71e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.57e-14 | 2 |
peripheral nervous system neoplasm | 1.92e-10 | 3 |
liver cancer | 1.65e-08 | 1 |
peripheral primitive neuroectodermal tumor | 1.77e-08 | 1 |
spindle cell sarcoma | 2.04e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.