FFCP PHASE1:Hg19::chr16:68867760..68867787,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2385|description=CAGE_peak_at_chr16:68867760..68867787,+|id=chr16:68867760..68867787,+|ontology_enrichment_celltype=CL:0000066!3.28e-27!254;CL:0002076!3.62e-19!43;CL:0000223!6.17e-17!59;CL:0002251!3.38e-11!21;CL:0000039!8.51e-10!7;CL:0000586!8.51e-10!7|ontology_enrichment_celltype_v019=CL:0000039;4.60e-14;7!CL:0000586;4.60e-14;7!CL:0002076;6.18e-11;42!CL:0002231;1.61e-09;3|ontology_enrichment_celltype_v019_2=CL:0000066,2.48e-15,253;CL:0000039,9.35e-14,7;CL:0000586,9.35e-14,7;CL:0002076,7.04e-13,42;CL:0000223,3.17e-12,58;CL:0002231,1.53e-09,3|ontology_enrichment_development_v019=CL:0000223;1.23e-07;58|ontology_enrichment_disease=DOID:305!1.56e-21!106;DOID:0050687!1.08e-16!143;DOID:1749!1.27e-13!14;DOID:299!4.89e-10!25;DOID:162!3.23e-07!235;DOID:14566!9.65e-07!239|ontology_enrichment_disease_v019=DOID:1749;1.61e-11;14!DOID:299;3.41e-09;25!DOID:305;3.93e-07;106|ontology_enrichment_disease_v019_2=DOID:305,2.98e-18,106;DOID:0050687,6.35e-17,143;DOID:1749,1.71e-11,14;DOID:162,5.93e-10,235;DOID:14566,1.54e-09,239;DOID:299,3.02e-09,25|ontology_enrichment_uberon=UBERON:0004119!3.53e-15!169;UBERON:0000925!3.53e-15!169;UBERON:0006595!3.53e-15!169;UBERON:0001007!2.08e-11!155;UBERON:0001555!2.08e-11!155;UBERON:0007026!2.08e-11!155;UBERON:0005911!2.01e-10!82;UBERON:0005153!1.59e-08!37;UBERON:0004921!1.76e-08!129;UBERON:0004185!1.76e-08!129;UBERON:0005156!3.05e-08!59;UBERON:0000990!3.05e-08!59;UBERON:0003101!5.06e-08!22;UBERON:0000079!5.06e-08!22;UBERON:0001004!2.50e-07!72;UBERON:0000464!2.85e-07!104;UBERON:0000466!3.49e-07!126;UBERON:0000077!3.70e-07!130;UBERON:0000344!8.36e-07!12|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.87e-07,160;UBERON:0000925,1.87e-07,160;UBERON:0006595,1.87e-07,160;UBERON:0005911,2.94e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,1.43402297694502,0.365921118388786,0.265059536642971,0.69716365721711,0.621966330092223,0.504641701751257,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,1.8448265781467,0,0.658501712451753,1.1240175325762,0.904760751704678,0.0925884451585296,0,0,0,0,0,0,0,0,3.1608175918371,0.858486162094873,0,0,0,0.93733833986777,0,0.567100388969546,0.716468181622786,0.871901815541886,0,0,0,0,0,0,0.253991577168676,0,2.34434894420094,0,0.205654985406647,2.10240140490742,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,3.40860999515584,6.16942625870505,0,0,0,0.902399225814824,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,1.01950509218015,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47927373041467,2.30628080838127,0.255225424989168,2.52894452138875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,1.43246690842614,0.296964680832639,0.921482106297696,0,0,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0.179736702294654,5.01259289091706,0,0,0,0,0,0,0,12.240104771006,0.0874599999961957,0,4.09656413827799,7.11910220819746,3.30942754475111,0,0,0,0,0,0,0,0,0,0,1.81250867562184,0.0769502585037971,0,7.37804494041792,3.68006342080066,5.21507385225639,0,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0.476809736941136,0,1.46909527343233,2.82706142867882,0,0,0.796118080530053,6.11030144933625,0,0,0,0,0,0,0,1.76098157038881,0,0.789168805698781,1.20990716048664,0,0,0,0,0,0,0,0,1.70765727617876,0,3.99187398170801,2.74378712760257,0.522355239482415,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,2.93327074102205,0.480952921509202,0.640358984218058,0,3.31407959454444,0,0,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0,1.99679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.964518890790115,1.51293380256957,2.9080823662043,0.674921674654501,0.77380195455795,0,2.34804281319486,0.0788057072991982,0.157363764404994,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,2.56630256826494,0,0,0.157204305099666,3.3139124427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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2385 | |||
|description=CAGE_peak_at_chr16:68867760..68867787,+ | |||
|id=chr16:68867760..68867787,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.28e-27!254;CL:0002076!3.62e-19!43;CL:0000223!6.17e-17!59;CL:0002251!3.38e-11!21;CL:0000039!8.51e-10!7;CL:0000586!8.51e-10!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.60e-14;7!CL:0000586;4.60e-14;7!CL:0002076;6.18e-11;42!CL:0002231;1.61e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.48e-15,253;CL:0000039,9.35e-14,7;CL:0000586,9.35e-14,7;CL:0002076,7.04e-13,42;CL:0000223,3.17e-12,58;CL:0002231,1.53e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.23e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.56e-21!106;DOID:0050687!1.08e-16!143;DOID:1749!1.27e-13!14;DOID:299!4.89e-10!25;DOID:162!3.23e-07!235;DOID:14566!9.65e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.61e-11;14!DOID:299;3.41e-09;25!DOID:305;3.93e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.98e-18,106;DOID:0050687,6.35e-17,143;DOID:1749,1.71e-11,14;DOID:162,5.93e-10,235;DOID:14566,1.54e-09,239;DOID:299,3.02e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.53e-15!169;UBERON:0000925!3.53e-15!169;UBERON:0006595!3.53e-15!169;UBERON:0001007!2.08e-11!155;UBERON:0001555!2.08e-11!155;UBERON:0007026!2.08e-11!155;UBERON:0005911!2.01e-10!82;UBERON:0005153!1.59e-08!37;UBERON:0004921!1.76e-08!129;UBERON:0004185!1.76e-08!129;UBERON:0005156!3.05e-08!59;UBERON:0000990!3.05e-08!59;UBERON:0003101!5.06e-08!22;UBERON:0000079!5.06e-08!22;UBERON:0001004!2.50e-07!72;UBERON:0000464!2.85e-07!104;UBERON:0000466!3.49e-07!126;UBERON:0000077!3.70e-07!130;UBERON:0000344!8.36e-07!12 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.87e-07,160;UBERON:0000925,1.87e-07,160;UBERON:0006595,1.87e-07,160;UBERON:0005911,2.94e-07,82 | |||
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|short_description=p@chr16:68867760..68867787,+ | |||
}} |
Revision as of 11:18, 11 September 2013
Short description: | p@chr16:68867760..68867787, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:68867760..68867787, + |
Coexpression cluster: | C2385_breast_choriocarcinoma_squamous_pancreatic_malignant_mesothelioma_bronchioalveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.48e-15 | 253 |
germ line cell | 9.35e-14 | 7 |
germ cell | 9.35e-14 | 7 |
endo-epithelial cell | 7.04e-13 | 42 |
endodermal cell | 3.17e-12 | 58 |
epithelial cell of prostate | 1.53e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.87e-07 | 160 |
endoderm | 1.87e-07 | 160 |
presumptive endoderm | 1.87e-07 | 160 |
endo-epithelium | 2.94e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.98e-18 | 106 |
cell type cancer | 6.35e-17 | 143 |
squamous cell carcinoma | 1.71e-11 | 14 |
cancer | 5.93e-10 | 235 |
disease of cellular proliferation | 1.54e-09 | 239 |
adenocarcinoma | 3.02e-09 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.