FFCP PHASE1:Hg19::chr16:69760911..69760933,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:69760911..69760933,+|id=chr16:69760911..69760933,+|ontology_enrichment_celltype=CL:0000066!2.81e-13!254|ontology_enrichment_celltype_v019=CL:0000082;5.09e-07;19|ontology_enrichment_celltype_v019_2=CL:0000066,2.86e-15,253;CL:0000082,4.03e-07,19|ontology_enrichment_development_v019=UBERON:0008947;1.83e-19;29!UBERON:0001041;1.26e-07;30|ontology_enrichment_disease=DOID:305!1.07e-20!106;DOID:0050687!5.28e-15!143;DOID:162!1.01e-14!235;DOID:14566!8.77e-14!239;DOID:0050615!6.27e-07!16|ontology_enrichment_disease_v019=DOID:0050615;8.65e-11;16!DOID:1324;2.64e-09;15!DOID:305;1.17e-07;106|ontology_enrichment_disease_v019_2=DOID:305,3.25e-28,106;DOID:0050687,1.61e-21,143;DOID:162,1.15e-18,235;DOID:14566,5.75e-18,239;DOID:0050615,4.41e-11,16;DOID:1324,1.95e-09,15|ontology_enrichment_uberon=UBERON:0001737!3.30e-07!9|ontology_enrichment_uberon_v019=UBERON:0001737;2.22e-19;9!UBERON:0001557;2.22e-19;9!UBERON:0000072;2.20e-14;37!UBERON:0000065;2.69e-10;44!UBERON:0004802;5.09e-07;19!UBERON:0000115;5.09e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.59e-19,9;UBERON:0008947,1.20e-15,38;UBERON:0003258,1.20e-15,38;UBERON:0000072,9.95e-12,47;UBERON:0000065,1.31e-09,54;UBERON:0001557,2.86e-08,19;UBERON:0001004,1.41e-07,74;UBERON:0004802,4.03e-07,19;UBERON:0000115,4.03e-07,19|phase1_expression=0.54503513781167,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0,0,1.79132379391939,0.647787332037959,1.54545340580512,0.290796477559129,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0,0.575384784644301,0.256160706529101,0.709446689665756,1.03423704220986,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0.659702600373432,0.398927315243264,0,0.870627715885752,1.13477044938228,1.24564449799115,0.502497330513487,1.0429658368404,0.217188844705117,0,1.47311054395026,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0,0.289693037921647,0,0,0.378139268656271,0.221729397462564,0,0.130979075497713,0.364295288292542,0.741568885568859,0,1.74129737299267,0.398873881556595,0,0,0,0.39752481473341,0,1.04142150482278,0,0.419499436209906,0.275118041940067,0.626984899610432,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0.446498641420399,0.44905874525234,1.35133776579987,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0,0.352303495931295,0.161872944368132,0.140450806702248,0.408308342509787,0.245668634623536,0.516628905878827,0,0,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0.89694817844431,0,0.211931901159562,0,0.92747276314595,0.772921620136887,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.368199594569197,0,0.355009592516614,0.201504196455281,0.67824236924195,0,0.818238361772504,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,1.41968160047813,1.51726221070292,1.20505514941741,1.65440959098591,1.08939722046203,1.42362371466658,1.61797569792197,2.5508790466295,3.07797725557112,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0.115930404975077,0,0.433099343283221,0.462985512576611,0.190254152234598,1.58040879591855,0.858486162094873,0.492434012174795,0.234004265139238,0.891786973732369,0,0,0.141775097242386,0.179117045405697,0,0,0,0.792435906119034,0,0,0.25248486685276,0.761974731506028,0.763976851116555,1.17217447210047,0,0.411309970813294,0.600686115687835,0.285826432630578,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0,0,0.399891964728228,0,0.502257091432126,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.560425719967636,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0,0.260650843404249,0.391602314925481,0,0,0,0,0,1.66435439510497,0,0,0,0.561320188866147,0.256278298511402,0.511707249066704,0.482561763430822,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.120859449591622,0.40101294060657,0.184161977871793,0.114814448164607,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,1.13733384070897,1.36074964221213,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:69760911..69760933,+ | |||
|id=chr16:69760911..69760933,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.81e-13!254 | |||
|ontology_enrichment_celltype_v019=CL:0000082;5.09e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.86e-15,253;CL:0000082,4.03e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.83e-19;29!UBERON:0001041;1.26e-07;30 | |||
|ontology_enrichment_disease=DOID:305!1.07e-20!106;DOID:0050687!5.28e-15!143;DOID:162!1.01e-14!235;DOID:14566!8.77e-14!239;DOID:0050615!6.27e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:0050615;8.65e-11;16!DOID:1324;2.64e-09;15!DOID:305;1.17e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.25e-28,106;DOID:0050687,1.61e-21,143;DOID:162,1.15e-18,235;DOID:14566,5.75e-18,239;DOID:0050615,4.41e-11,16;DOID:1324,1.95e-09,15 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.30e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.22e-19;9!UBERON:0001557;2.22e-19;9!UBERON:0000072;2.20e-14;37!UBERON:0000065;2.69e-10;44!UBERON:0004802;5.09e-07;19!UBERON:0000115;5.09e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.59e-19,9;UBERON:0008947,1.20e-15,38;UBERON:0003258,1.20e-15,38;UBERON:0000072,9.95e-12,47;UBERON:0000065,1.31e-09,54;UBERON:0001557,2.86e-08,19;UBERON:0001004,1.41e-07,74;UBERON:0004802,4.03e-07,19;UBERON:0000115,4.03e-07,19 | |||
|phase1_expression=0.54503513781167,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0,0,1.79132379391939,0.647787332037959,1.54545340580512,0.290796477559129,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0,0.575384784644301,0.256160706529101,0.709446689665756,1.03423704220986,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0.659702600373432,0.398927315243264,0,0.870627715885752,1.13477044938228,1.24564449799115,0.502497330513487,1.0429658368404,0.217188844705117,0,1.47311054395026,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0,0.289693037921647,0,0,0.378139268656271,0.221729397462564,0,0.130979075497713,0.364295288292542,0.741568885568859,0,1.74129737299267,0.398873881556595,0,0,0,0.39752481473341,0,1.04142150482278,0,0.419499436209906,0.275118041940067,0.626984899610432,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0.446498641420399,0.44905874525234,1.35133776579987,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0,0.352303495931295,0.161872944368132,0.140450806702248,0.408308342509787,0.245668634623536,0.516628905878827,0,0,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0.89694817844431,0,0.211931901159562,0,0.92747276314595,0.772921620136887,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.368199594569197,0,0.355009592516614,0.201504196455281,0.67824236924195,0,0.818238361772504,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,1.41968160047813,1.51726221070292,1.20505514941741,1.65440959098591,1.08939722046203,1.42362371466658,1.61797569792197,2.5508790466295,3.07797725557112,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0.115930404975077,0,0.433099343283221,0.462985512576611,0.190254152234598,1.58040879591855,0.858486162094873,0.492434012174795,0.234004265139238,0.891786973732369,0,0,0.141775097242386,0.179117045405697,0,0,0,0.792435906119034,0,0,0.25248486685276,0.761974731506028,0.763976851116555,1.17217447210047,0,0.411309970813294,0.600686115687835,0.285826432630578,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0,0,0.399891964728228,0,0.502257091432126,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.560425719967636,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0,0.260650843404249,0.391602314925481,0,0,0,0,0,1.66435439510497,0,0,0,0.561320188866147,0.256278298511402,0.511707249066704,0.482561763430822,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.120859449591622,0.40101294060657,0.184161977871793,0.114814448164607,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,1.13733384070897,1.36074964221213,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0,0,0.309123034943167,0.183138929636687,0.330037999682352,0,0.650060246036521,0,0.096670718292122,0,0.460511024178389,0.137836572484531,0.537101224341368,0.290033387828457,0.255679882248303,0,0.165284915360978,0.384380134730212,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0.924100740528266,0,0,0,0.143124886741991,0,0.632758849437452,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0.709522128141196,0,0.329294892959902,0,0,0,0,1.08890984861323,0.282431402330337,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0.766021480529467,0.211673582723883,0.324621940274555,0,0,0.156679895773023,0,0.50787533340481,0,0.80719882876419,0,0,0.921722292925374,2.46043718681657,2.33588798396672,0.781552381608161,0.278406173895242,0,0,0,0,0.18714054040822,1.02555725490326,0,0,0.568272293612826,0,0,0,0,0.422008249231538,0.445234820091624,0.329607748453519,0.211125408127993,0,0,0.251932747854276,0.20453736500431,0.123084805461069,0,0.179736702294654,4.11748701753901,0.511572370226872,0.394573622547734,0,0,1.93866549219044,0.371072392647405,0,1.04171104434093,0.524759999977174,0.724999575434793,1.593108275997,2.2882828526349,3.54581522651905,0,0,0,0.885741385813839,0,0,0.1105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| |||
|short_description=p@chr16:69760911..69760933,+ | |||
}} |
Revision as of 11:20, 11 September 2013
Short description: | p@chr16:69760911..69760933, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:69760911..69760933, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.86e-15 | 253 |
epithelial cell of lung | 4.03e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.59e-19 | 9 |
respiratory primordium | 1.20e-15 | 38 |
endoderm of foregut | 1.20e-15 | 38 |
segment of respiratory tract | 9.95e-12 | 47 |
respiratory tract | 1.31e-09 | 54 |
upper respiratory tract | 2.86e-08 | 19 |
respiratory system | 1.41e-07 | 74 |
respiratory tract epithelium | 4.03e-07 | 19 |
lung epithelium | 4.03e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.25e-28 | 106 |
cell type cancer | 1.61e-21 | 143 |
cancer | 1.15e-18 | 235 |
disease of cellular proliferation | 5.75e-18 | 239 |
respiratory system cancer | 4.41e-11 | 16 |
lung cancer | 1.95e-09 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.