FFCP PHASE1:Hg19::chr17:37809300..37809309,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10948|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17579|TSSclassifier=S|UniProt=|association_with_transcript=-41bp_to_ENST00000488876,uc002hsf.2_5end|coexpression_cluster_id=C412|description=CAGE_peak_13_at_STARD3_5end|id=chr17:37809300..37809309,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002149;1.22e-44;6!CL:0002255;1.22e-44;6!CL:0000499;1.47e-10;28|ontology_enrichment_celltype_v019_2=CL:0002149,1.22e-44,6;CL:0002255,1.22e-44,6;CL:0000499,1.47e-10,28;CL:0002076,2.10e-07,42|ontology_enrichment_development_v019=UBERON:0010122;5.04e-34;2!UBERON:0005795;2.38e-27;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3001;1.22e-44;6!DOID:299;1.09e-11;25!DOID:120;6.56e-11;27!DOID:193;3.10e-10;29|ontology_enrichment_disease_v019_2=DOID:3001,1.22e-44,6;DOID:299,1.09e-11,25;DOID:120,6.56e-11,27;DOID:193,3.10e-10,29|ontology_enrichment_uberon=UBERON:0005743!1.02e-35!86;UBERON:0001017!4.20e-35!82;UBERON:0002346!2.96e-34!90;UBERON:0003075!1.22e-33!86;UBERON:0007284!1.22e-33!86;UBERON:0001049!2.21e-33!57;UBERON:0005068!2.21e-33!57;UBERON:0006241!2.21e-33!57;UBERON:0007135!2.21e-33!57;UBERON:0000073!1.07e-31!94;UBERON:0001016!1.07e-31!94;UBERON:0000955!5.20e-31!69;UBERON:0006238!5.20e-31!69;UBERON:0003056!3.51e-25!61;UBERON:0002616!8.15e-24!59;UBERON:0002780!4.82e-23!41;UBERON:0001890!4.82e-23!41;UBERON:0006240!4.82e-23!41;UBERON:0000033!1.39e-22!123;UBERON:0003080!2.07e-22!42;UBERON:0007023!1.29e-21!115;UBERON:0000153!3.31e-21!129;UBERON:0007811!3.31e-21!129;UBERON:0002791!1.49e-19!33;UBERON:0000924!3.66e-19!173;UBERON:0006601!3.66e-19!173;UBERON:0002020!6.03e-19!34;UBERON:0003528!6.03e-19!34;UBERON:0001893!6.68e-19!34;UBERON:0004121!2.05e-18!169;UBERON:0002308!3.43e-16!9;UBERON:0000125!3.43e-16!9;UBERON:0002420!6.09e-16!9;UBERON:0007245!6.09e-16!9;UBERON:0010009!6.09e-16!9;UBERON:0010011!6.09e-16!9;UBERON:0000454!6.09e-16!9;UBERON:0009663!8.46e-15!7;UBERON:0001869!1.10e-14!32;UBERON:0002240!7.81e-13!3;UBERON:0003076!3.25e-12!15;UBERON:0003057!3.25e-12!15;UBERON:0000369!2.79e-10!4;UBERON:0002435!2.79e-10!4;UBERON:0000204!2.79e-10!4;UBERON:0010082!2.79e-10!4;UBERON:0002619!2.27e-09!22;UBERON:0000025!4.49e-09!194;UBERON:0000956!3.81e-08!25;UBERON:0000203!3.81e-08!25;UBERON:0000483!4.07e-08!309;UBERON:0002298!4.98e-08!8;UBERON:0001950!5.09e-08!20;UBERON:0000119!5.81e-08!312;UBERON:0005174!7.26e-08!5;UBERON:0001137!7.26e-08!5;UBERON:0000349!1.27e-07!5;UBERON:0000475!2.53e-07!365;UBERON:0004111!9.33e-07!241|ontology_enrichment_uberon_v019=UBERON:0001873;5.04e-34;2!UBERON:0005383;3.27e-23;3!UBERON:0005382;3.27e-23;3!UBERON:0000369;8.69e-18;4!UBERON:0002435;8.69e-18;4!UBERON:0000204;8.69e-18;4!UBERON:0000995;1.27e-16;17!UBERON:0003975;9.05e-16;18!UBERON:0004175;1.09e-13;21!UBERON:0009663;8.99e-11;7!UBERON:0003134;6.23e-10;33!UBERON:0002420;1.12e-08;9!UBERON:0000125;1.12e-08;9!UBERON:0007245;1.12e-08;9!UBERON:0002308;1.12e-08;9!UBERON:0010009;1.12e-08;9!UBERON:0010011;1.12e-08;9!UBERON:0000454;1.12e-08;9!UBERON:0000474;2.21e-08;37|ontology_enrichment_uberon_v019_2=UBERON:0001873,5.04e-34,2;UBERON:0010122,5.04e-34,2;UBERON:0005383,3.27e-23,3;UBERON:0005382,3.27e-23,3;UBERON:0000369,8.69e-18,4;UBERON:0002435,8.69e-18,4;UBERON:0000204,8.69e-18,4;UBERON:0010082,8.69e-18,4;UBERON:0000995,1.09e-13,21;UBERON:0005795,4.01e-13,22;UBERON:0003975,4.01e-13,22;UBERON:0004175,1.09e-11,25;UBERON:0009663,8.99e-11,7;UBERON:0002420,1.12e-08,9;UBERON:0000125,1.12e-08,9;UBERON:0007245,1.12e-08,9;UBERON:0002308,1.12e-08,9;UBERON:0010009,1.12e-08,9;UBERON:0010011,1.12e-08,9;UBERON:0000454,1.12e-08,9;UBERON:0003134,2.92e-08,37;UBERON:0000474,2.92e-08,37;UBERON:0003100,1.47e-07,41|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,2.29133233388275,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10948 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17579 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-41bp_to_ENST00000488876,uc002hsf.2_5end | |||
|coexpression_cluster_id=C412 | |||
|description=CAGE_peak_13_at_STARD3_5end | |||
|id=chr17:37809300..37809309,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002149;1.22e-44;6!CL:0002255;1.22e-44;6!CL:0000499;1.47e-10;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.22e-44,6;CL:0002255,1.22e-44,6;CL:0000499,1.47e-10,28;CL:0002076,2.10e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.04e-34;2!UBERON:0005795;2.38e-27;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;1.22e-44;6!DOID:299;1.09e-11;25!DOID:120;6.56e-11;27!DOID:193;3.10e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.22e-44,6;DOID:299,1.09e-11,25;DOID:120,6.56e-11,27;DOID:193,3.10e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.02e-35!86;UBERON:0001017!4.20e-35!82;UBERON:0002346!2.96e-34!90;UBERON:0003075!1.22e-33!86;UBERON:0007284!1.22e-33!86;UBERON:0001049!2.21e-33!57;UBERON:0005068!2.21e-33!57;UBERON:0006241!2.21e-33!57;UBERON:0007135!2.21e-33!57;UBERON:0000073!1.07e-31!94;UBERON:0001016!1.07e-31!94;UBERON:0000955!5.20e-31!69;UBERON:0006238!5.20e-31!69;UBERON:0003056!3.51e-25!61;UBERON:0002616!8.15e-24!59;UBERON:0002780!4.82e-23!41;UBERON:0001890!4.82e-23!41;UBERON:0006240!4.82e-23!41;UBERON:0000033!1.39e-22!123;UBERON:0003080!2.07e-22!42;UBERON:0007023!1.29e-21!115;UBERON:0000153!3.31e-21!129;UBERON:0007811!3.31e-21!129;UBERON:0002791!1.49e-19!33;UBERON:0000924!3.66e-19!173;UBERON:0006601!3.66e-19!173;UBERON:0002020!6.03e-19!34;UBERON:0003528!6.03e-19!34;UBERON:0001893!6.68e-19!34;UBERON:0004121!2.05e-18!169;UBERON:0002308!3.43e-16!9;UBERON:0000125!3.43e-16!9;UBERON:0002420!6.09e-16!9;UBERON:0007245!6.09e-16!9;UBERON:0010009!6.09e-16!9;UBERON:0010011!6.09e-16!9;UBERON:0000454!6.09e-16!9;UBERON:0009663!8.46e-15!7;UBERON:0001869!1.10e-14!32;UBERON:0002240!7.81e-13!3;UBERON:0003076!3.25e-12!15;UBERON:0003057!3.25e-12!15;UBERON:0000369!2.79e-10!4;UBERON:0002435!2.79e-10!4;UBERON:0000204!2.79e-10!4;UBERON:0010082!2.79e-10!4;UBERON:0002619!2.27e-09!22;UBERON:0000025!4.49e-09!194;UBERON:0000956!3.81e-08!25;UBERON:0000203!3.81e-08!25;UBERON:0000483!4.07e-08!309;UBERON:0002298!4.98e-08!8;UBERON:0001950!5.09e-08!20;UBERON:0000119!5.81e-08!312;UBERON:0005174!7.26e-08!5;UBERON:0001137!7.26e-08!5;UBERON:0000349!1.27e-07!5;UBERON:0000475!2.53e-07!365;UBERON:0004111!9.33e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;5.04e-34;2!UBERON:0005383;3.27e-23;3!UBERON:0005382;3.27e-23;3!UBERON:0000369;8.69e-18;4!UBERON:0002435;8.69e-18;4!UBERON:0000204;8.69e-18;4!UBERON:0000995;1.27e-16;17!UBERON:0003975;9.05e-16;18!UBERON:0004175;1.09e-13;21!UBERON:0009663;8.99e-11;7!UBERON:0003134;6.23e-10;33!UBERON:0002420;1.12e-08;9!UBERON:0000125;1.12e-08;9!UBERON:0007245;1.12e-08;9!UBERON:0002308;1.12e-08;9!UBERON:0010009;1.12e-08;9!UBERON:0010011;1.12e-08;9!UBERON:0000454;1.12e-08;9!UBERON:0000474;2.21e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,5.04e-34,2;UBERON:0010122,5.04e-34,2;UBERON:0005383,3.27e-23,3;UBERON:0005382,3.27e-23,3;UBERON:0000369,8.69e-18,4;UBERON:0002435,8.69e-18,4;UBERON:0000204,8.69e-18,4;UBERON:0010082,8.69e-18,4;UBERON:0000995,1.09e-13,21;UBERON:0005795,4.01e-13,22;UBERON:0003975,4.01e-13,22;UBERON:0004175,1.09e-11,25;UBERON:0009663,8.99e-11,7;UBERON:0002420,1.12e-08,9;UBERON:0000125,1.12e-08,9;UBERON:0007245,1.12e-08,9;UBERON:0002308,1.12e-08,9;UBERON:0010009,1.12e-08,9;UBERON:0010011,1.12e-08,9;UBERON:0000454,1.12e-08,9;UBERON:0003134,2.92e-08,37;UBERON:0000474,2.92e-08,37;UBERON:0003100,1.47e-07,41 | |||
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|short_description=p13@STARD3 | |||
}} |
Revision as of 13:18, 11 September 2013
Short description: | p13@STARD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_STARD3_5end |
Coexpression cluster: | C412_serous_breast_papillotubular_ductus_seminal_kidney_clear |
Association with transcript: | -41bp_to_ENST00000488876, uc002hsf.2_5end |
EntrezGene: | STARD3 |
HGNC: | 17579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.22e-44 | 6 |
stromal cell of endometrium | 1.22e-44 | 6 |
stromal cell | 1.47e-10 | 28 |
endo-epithelial cell | 2.10e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 5.04e-34 | 2 |
future caudate nucleus | 5.04e-34 | 2 |
caudate-putamen | 3.27e-23 | 3 |
dorsal striatum | 3.27e-23 | 3 |
corpus striatum | 8.69e-18 | 4 |
striatum | 8.69e-18 | 4 |
ventral part of telencephalon | 8.69e-18 | 4 |
future corpus striatum | 8.69e-18 | 4 |
uterus | 1.09e-13 | 21 |
embryonic uterus | 4.01e-13 | 22 |
internal female genitalia | 4.01e-13 | 22 |
internal genitalia | 1.09e-11 | 25 |
telencephalic nucleus | 8.99e-11 | 7 |
basal ganglion | 1.12e-08 | 9 |
neural nucleus | 1.12e-08 | 9 |
nuclear complex of neuraxis | 1.12e-08 | 9 |
nucleus of brain | 1.12e-08 | 9 |
aggregate regional part of brain | 1.12e-08 | 9 |
collection of basal ganglia | 1.12e-08 | 9 |
cerebral subcortex | 1.12e-08 | 9 |
female reproductive organ | 2.92e-08 | 37 |
female reproductive system | 2.92e-08 | 37 |
female organism | 1.47e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.22e-44 | 6 |
adenocarcinoma | 1.09e-11 | 25 |
female reproductive organ cancer | 6.56e-11 | 27 |
reproductive organ cancer | 3.10e-10 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.