FFCP PHASE1:Hg19::chr18:28742704..28742718,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1823|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3035|TSSclassifier=W|UniProt=Q08554,Q9HB00|association_with_transcript=100bp_to_ENST00000257197,ENST00000257198,NM_004948,NM_024421,uc002kwm.2,uc002kwn.2_5end|coexpression_cluster_id=C202|description=CAGE_peak_3_at_DSC1_5end|id=chr18:28742704..28742718,-|ontology_enrichment_celltype=CL:0000625!1.91e-16!11;CL:0000791!6.47e-15!18;CL:0000789!6.47e-15!18;CL:0002420!6.47e-15!18;CL:0002419!6.47e-15!18;CL:0000790!6.47e-15!18;CL:0000084!3.70e-10!25;CL:0000827!3.70e-10!25;CL:0001014!8.96e-08!2;CL:0001016!8.96e-08!2|ontology_enrichment_celltype_v019=CL:0000622;1.95e-15;5!CL:0000154;4.95e-13;6!CL:0001014;1.72e-10;2!CL:0001016;1.72e-10;2!CL:0000317;3.12e-10;2!CL:1000448;3.12e-10;2!CL:0002308;3.12e-10;2!CL:0002140;3.12e-10;2!CL:0000150;5.31e-09;9!CL:0000362;7.16e-09;9!CL:0002623;1.93e-07;3|ontology_enrichment_celltype_v019_2=CL:0000622,1.88e-15,5;CL:0000154,4.81e-13,6;CL:0001014,1.72e-10,2;CL:0001016,1.72e-10,2;CL:0000317,2.99e-10,2;CL:1000448,2.99e-10,2;CL:0002308,2.99e-10,2;CL:0002140,2.99e-10,2;CL:0000150,5.20e-09,9;CL:0000362,7.45e-09,9;CL:0002623,1.93e-07,3|ontology_enrichment_development_v019=UBERON:0000358;2.06e-19;1!UBERON:0004874;2.06e-19;1!UBERON:0008814;3.12e-10;2!UBERON:0010056;3.12e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001950!4.02e-18!20;UBERON:0002619!2.64e-16!22;UBERON:0001869!1.80e-14!32;UBERON:0000956!4.18e-14!25;UBERON:0000203!4.18e-14!25;UBERON:0001893!1.87e-13!34;UBERON:0007023!4.83e-13!115;UBERON:0000200!1.07e-12!6;UBERON:0002791!5.55e-12!33;UBERON:0002020!1.48e-11!34;UBERON:0003528!1.48e-11!34;UBERON:0002780!1.14e-10!41;UBERON:0001890!1.14e-10!41;UBERON:0006240!1.14e-10!41;UBERON:0002771!1.61e-10!3;UBERON:0003080!2.40e-10!42;UBERON:0004121!7.42e-10!169;UBERON:0000924!1.85e-09!173;UBERON:0006601!1.85e-09!173;UBERON:0000153!9.90e-09!129;UBERON:0007811!9.90e-09!129;UBERON:0001049!5.69e-08!57;UBERON:0005068!5.69e-08!57;UBERON:0006241!5.69e-08!57;UBERON:0007135!5.69e-08!57;UBERON:0000033!1.04e-07!123;UBERON:0002616!1.35e-07!59;UBERON:0003075!1.52e-07!86;UBERON:0007284!1.52e-07!86;UBERON:0001042!2.78e-07!10;UBERON:0009145!2.78e-07!10;UBERON:0003056!2.88e-07!61;UBERON:0002346!4.98e-07!90;UBERON:0000955!6.76e-07!69;UBERON:0006238!6.76e-07!69|ontology_enrichment_uberon_v019=UBERON:0007029;8.95e-20;1!UBERON:0000989;2.06e-19;1!UBERON:0008811;2.06e-19;1!UBERON:0001003;1.89e-11;15!UBERON:0007376;1.89e-11;15!UBERON:0002702;2.17e-10;2!UBERON:0002419;3.12e-10;2!UBERON:0007771;3.12e-10;2!UBERON:0003297;3.12e-10;2!UBERON:0001821;3.12e-10;2!UBERON:0003487;3.12e-10;2!UBERON:0001820;3.12e-10;2!UBERON:0001870;2.40e-07;3!UBERON:0001723;3.06e-07;3!UBERON:0001033;3.06e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007029,8.95e-20,1;UBERON:0000989,1.88e-19,1;UBERON:0008811,1.88e-19,1;UBERON:0006258,1.88e-19,1;UBERON:0005876,1.88e-19,1;UBERON:0004874,1.88e-19,1;UBERON:0001003,1.96e-11,15;UBERON:0007376,1.96e-11,15;UBERON:0007383,1.96e-11,15;UBERON:0002702,2.49e-10,2;UBERON:0002419,2.99e-10,2;UBERON:0007771,2.99e-10,2;UBERON:0003297,2.99e-10,2;UBERON:0001821,2.99e-10,2;UBERON:0003487,2.99e-10,2;UBERON:0001820,2.99e-10,2;UBERON:0005089,2.99e-10,2;UBERON:0005088,2.99e-10,2;UBERON:0001870,2.63e-07,3;UBERON:0001723,2.79e-07,3;UBERON:0001033,2.79e-07,3;UBERON:0010056,2.79e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593146252648242,0,0,0,0.383220493601921,0,0,0,0.651083453856419,0.950452044448374,0.150575119077773,0.383959833463255,0,0.473554504088034,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,1.1240175325762,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0.438770794307945,0,0.13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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1823 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3035 | |||
|TSSclassifier=W | |||
|UniProt=Q08554,Q9HB00 | |||
|association_with_transcript=100bp_to_ENST00000257197,ENST00000257198,NM_004948,NM_024421,uc002kwm.2,uc002kwn.2_5end | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_3_at_DSC1_5end | |||
|id=chr18:28742704..28742718,- | |||
|ontology_enrichment_celltype=CL:0000625!1.91e-16!11;CL:0000791!6.47e-15!18;CL:0000789!6.47e-15!18;CL:0002420!6.47e-15!18;CL:0002419!6.47e-15!18;CL:0000790!6.47e-15!18;CL:0000084!3.70e-10!25;CL:0000827!3.70e-10!25;CL:0001014!8.96e-08!2;CL:0001016!8.96e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000622;1.95e-15;5!CL:0000154;4.95e-13;6!CL:0001014;1.72e-10;2!CL:0001016;1.72e-10;2!CL:0000317;3.12e-10;2!CL:1000448;3.12e-10;2!CL:0002308;3.12e-10;2!CL:0002140;3.12e-10;2!CL:0000150;5.31e-09;9!CL:0000362;7.16e-09;9!CL:0002623;1.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.88e-15,5;CL:0000154,4.81e-13,6;CL:0001014,1.72e-10,2;CL:0001016,1.72e-10,2;CL:0000317,2.99e-10,2;CL:1000448,2.99e-10,2;CL:0002308,2.99e-10,2;CL:0002140,2.99e-10,2;CL:0000150,5.20e-09,9;CL:0000362,7.45e-09,9;CL:0002623,1.93e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.06e-19;1!UBERON:0004874;2.06e-19;1!UBERON:0008814;3.12e-10;2!UBERON:0010056;3.12e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!4.02e-18!20;UBERON:0002619!2.64e-16!22;UBERON:0001869!1.80e-14!32;UBERON:0000956!4.18e-14!25;UBERON:0000203!4.18e-14!25;UBERON:0001893!1.87e-13!34;UBERON:0007023!4.83e-13!115;UBERON:0000200!1.07e-12!6;UBERON:0002791!5.55e-12!33;UBERON:0002020!1.48e-11!34;UBERON:0003528!1.48e-11!34;UBERON:0002780!1.14e-10!41;UBERON:0001890!1.14e-10!41;UBERON:0006240!1.14e-10!41;UBERON:0002771!1.61e-10!3;UBERON:0003080!2.40e-10!42;UBERON:0004121!7.42e-10!169;UBERON:0000924!1.85e-09!173;UBERON:0006601!1.85e-09!173;UBERON:0000153!9.90e-09!129;UBERON:0007811!9.90e-09!129;UBERON:0001049!5.69e-08!57;UBERON:0005068!5.69e-08!57;UBERON:0006241!5.69e-08!57;UBERON:0007135!5.69e-08!57;UBERON:0000033!1.04e-07!123;UBERON:0002616!1.35e-07!59;UBERON:0003075!1.52e-07!86;UBERON:0007284!1.52e-07!86;UBERON:0001042!2.78e-07!10;UBERON:0009145!2.78e-07!10;UBERON:0003056!2.88e-07!61;UBERON:0002346!4.98e-07!90;UBERON:0000955!6.76e-07!69;UBERON:0006238!6.76e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;8.95e-20;1!UBERON:0000989;2.06e-19;1!UBERON:0008811;2.06e-19;1!UBERON:0001003;1.89e-11;15!UBERON:0007376;1.89e-11;15!UBERON:0002702;2.17e-10;2!UBERON:0002419;3.12e-10;2!UBERON:0007771;3.12e-10;2!UBERON:0003297;3.12e-10;2!UBERON:0001821;3.12e-10;2!UBERON:0003487;3.12e-10;2!UBERON:0001820;3.12e-10;2!UBERON:0001870;2.40e-07;3!UBERON:0001723;3.06e-07;3!UBERON:0001033;3.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,8.95e-20,1;UBERON:0000989,1.88e-19,1;UBERON:0008811,1.88e-19,1;UBERON:0006258,1.88e-19,1;UBERON:0005876,1.88e-19,1;UBERON:0004874,1.88e-19,1;UBERON:0001003,1.96e-11,15;UBERON:0007376,1.96e-11,15;UBERON:0007383,1.96e-11,15;UBERON:0002702,2.49e-10,2;UBERON:0002419,2.99e-10,2;UBERON:0007771,2.99e-10,2;UBERON:0003297,2.99e-10,2;UBERON:0001821,2.99e-10,2;UBERON:0003487,2.99e-10,2;UBERON:0001820,2.99e-10,2;UBERON:0005089,2.99e-10,2;UBERON:0005088,2.99e-10,2;UBERON:0001870,2.63e-07,3;UBERON:0001723,2.79e-07,3;UBERON:0001033,2.79e-07,3;UBERON:0010056,2.79e-07,3 | |||
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|short_description=p3@DSC1 | |||
}} |
Revision as of 17:11, 11 September 2013
Short description: | p3@DSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_DSC1_5end |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | 100bp_to_ENST00000257197, ENST00000257198, NM_004948, NM_024421, uc002kwm.2, uc002kwn.2_5end |
EntrezGene: | DSC1 |
HGNC: | 3035 |
UniProt: | Q08554Q9HB00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.88e-15 | 5 |
protein secreting cell | 4.81e-13 | 6 |
CD1a-positive Langerhans cell | 1.72e-10 | 2 |
immature CD1a-positive Langerhans cell | 1.72e-10 | 2 |
sebum secreting cell | 2.99e-10 | 2 |
epithelial cell of sweat gland | 2.99e-10 | 2 |
epithelial cell of skin gland | 2.99e-10 | 2 |
acinar cell of sebaceous gland | 2.99e-10 | 2 |
glandular epithelial cell | 5.20e-09 | 9 |
epidermal cell | 7.45e-09 | 9 |
acinar cell of salivary gland | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface | 8.95e-20 | 1 |
penis | 1.88e-19 | 1 |
intromittent organ | 1.88e-19 | 1 |
lateral plate mesenchyme | 1.88e-19 | 1 |
undifferentiated genital tubercle | 1.88e-19 | 1 |
somatopleure | 1.88e-19 | 1 |
skin epidermis | 1.96e-11 | 15 |
outer epithelium | 1.96e-11 | 15 |
enveloping layer of ectoderm | 1.96e-11 | 15 |
middle frontal gyrus | 2.49e-10 | 2 |
skin gland | 2.99e-10 | 2 |
epidermis gland | 2.99e-10 | 2 |
gland of integumental system | 2.99e-10 | 2 |
sebaceous gland | 2.99e-10 | 2 |
skin sebaceous gland | 2.99e-10 | 2 |
sweat gland | 2.99e-10 | 2 |
sweat gland placode | 2.99e-10 | 2 |
sebaceous gland placode | 2.99e-10 | 2 |
frontal cortex | 2.63e-07 | 3 |
tongue | 2.79e-07 | 3 |
gustatory system | 2.79e-07 | 3 |
future tongue | 2.79e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.