FFCP PHASE1:Hg19::chr19:46854101..46854113,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:46854101..46854113,+|id=chr19:46854101..46854113,+|ontology_enrichment_celltype=CL:0000542!6.12e-21!53;CL:0000051!6.12e-21!53;CL:0000838!4.09e-20!52;CL:0000988!7.03e-17!182;CL:0000037!4.64e-16!172;CL:0000566!4.64e-16!172;CL:0002032!9.46e-16!165;CL:0000837!9.46e-16!165;CL:0002139!5.41e-13!24;CL:0002087!1.19e-12!119;CL:0000945!5.19e-11!24;CL:0000826!5.19e-11!24;CL:0002031!3.05e-10!124;CL:0000071!7.52e-10!18;CL:0002546!7.52e-10!18;CL:0000738!1.27e-09!140;CL:0002543!2.77e-09!6;CL:0000625!7.32e-09!11;CL:0000115!8.23e-09!35;CL:0000791!8.29e-09!18;CL:0000789!8.29e-09!18;CL:0002420!8.29e-09!18;CL:0002419!8.29e-09!18;CL:0000790!8.29e-09!18;CL:0000084!1.05e-07!25;CL:0000827!1.05e-07!25|ontology_enrichment_celltype_v019=CL:0000625;2.81e-09;11!CL:0000945;7.43e-09;24|ontology_enrichment_celltype_v019_2=CL:0000838,1.80e-10,52;CL:0000542,3.07e-10,53;CL:0000051,3.07e-10,53;CL:0000625,1.86e-09,11;CL:0000945,4.88e-09,24;CL:0000826,4.88e-09,24|ontology_enrichment_development_v019=UBERON:0004872;9.20e-09;7|ontology_enrichment_disease=DOID:2531!7.80e-09!51;DOID:0060083!7.80e-09!51;DOID:1240!1.22e-07!39;DOID:8692!2.50e-07!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!7.52e-10!18;UBERON:0004638!7.52e-10!18;UBERON:0004852!7.52e-10!18;UBERON:0001638!9.29e-08!9;UBERON:0003920!9.29e-08!9;UBERON:0004582!9.29e-08!9;UBERON:0000487!1.67e-07!22;UBERON:0000178!2.53e-07!15;UBERON:0000179!2.53e-07!15;UBERON:0000463!2.53e-07!15|ontology_enrichment_uberon_v019=UBERON:0002106;9.26e-20;3!UBERON:0004177;4.46e-12;5!UBERON:0005057;4.46e-12;5!UBERON:0002390;8.00e-09;32!UBERON:0002193;2.54e-07;42!UBERON:0000178;6.04e-07;15!UBERON:0000179;6.04e-07;15!UBERON:0000463;6.04e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.81e-20,3;UBERON:0004854,6.81e-20,3;UBERON:0009034,6.81e-20,3;UBERON:0002095,6.81e-20,3;UBERON:0004782,6.81e-20,3;UBERON:0003281,6.81e-20,3;UBERON:0009664,6.81e-20,3;UBERON:0002296,6.81e-20,3;UBERON:0005602,6.81e-20,3;UBERON:0001179,6.81e-20,3;UBERON:0006293,6.81e-20,3;UBERON:0004177,8.09e-09,7;UBERON:0005057,8.09e-09,7;UBERON:0000945,9.04e-08,8;UBERON:0010039,9.04e-08,8;UBERON:0000178,8.57e-07,15;UBERON:0000179,8.57e-07,15;UBERON:0000463,8.57e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,1.98674854944673,1.14940825229924,1.57421562627358,0.393364276848904,0,0,0,0,0,0,0.142169232487422,0.880801318004542,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949387162322653,0.845021145247767,0,0.419317291016752,0.561643155732475,0,0.64290234678832,0.570025487482497,0,0.365328307529268,1.75996244461323,0.546138611262131,0,0.853460445133014,1.60158394814405,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0.32592226663359,0,0,2.1167986808183,0.883817722424512,0,0,0,0.520237390239513,0.164437904603676,1.38175008892924,0.869409257205157,0.14828656316206,0,0,1.35971211237079,0.383220493601921,0,1.01207876807801,1.59282707162048,0,0.950452044448374,0.602300476311091,1.53583933385302,0,1.89421801635213,1.64225599384209,0.403213486449465,0,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,1.10047216776027,0.208994966536811,0,1.77883131343355,1.00416183829401,0,0,0.976248230192678,0.367663080345869,0,0.625098097988558,0.673588117878509,0.112611480483322,1.53316637465883,1.89853131913626,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0.951270761172991,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.215627574859517,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0.185803175125719,0.28853842595289,0,0,0.997896857164083,0.5745161103971,5.92686031626872,0.973865820823666,0.280797178113459,0.228234679033192,0.626719583092093,0,0.846458889008016,0,0,0,0,0,0,0,0.390776190804081,1.67043704337145,0,0.270455678475983,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.552567831062295,0,0,1.84627208191604,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:46854101..46854113,+ | |||
|id=chr19:46854101..46854113,+ | |||
|ontology_enrichment_celltype=CL:0000542!6.12e-21!53;CL:0000051!6.12e-21!53;CL:0000838!4.09e-20!52;CL:0000988!7.03e-17!182;CL:0000037!4.64e-16!172;CL:0000566!4.64e-16!172;CL:0002032!9.46e-16!165;CL:0000837!9.46e-16!165;CL:0002139!5.41e-13!24;CL:0002087!1.19e-12!119;CL:0000945!5.19e-11!24;CL:0000826!5.19e-11!24;CL:0002031!3.05e-10!124;CL:0000071!7.52e-10!18;CL:0002546!7.52e-10!18;CL:0000738!1.27e-09!140;CL:0002543!2.77e-09!6;CL:0000625!7.32e-09!11;CL:0000115!8.23e-09!35;CL:0000791!8.29e-09!18;CL:0000789!8.29e-09!18;CL:0002420!8.29e-09!18;CL:0002419!8.29e-09!18;CL:0000790!8.29e-09!18;CL:0000084!1.05e-07!25;CL:0000827!1.05e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.81e-09;11!CL:0000945;7.43e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.80e-10,52;CL:0000542,3.07e-10,53;CL:0000051,3.07e-10,53;CL:0000625,1.86e-09,11;CL:0000945,4.88e-09,24;CL:0000826,4.88e-09,24 | |||
|ontology_enrichment_development_v019=UBERON:0004872;9.20e-09;7 | |||
|ontology_enrichment_disease=DOID:2531!7.80e-09!51;DOID:0060083!7.80e-09!51;DOID:1240!1.22e-07!39;DOID:8692!2.50e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!7.52e-10!18;UBERON:0004638!7.52e-10!18;UBERON:0004852!7.52e-10!18;UBERON:0001638!9.29e-08!9;UBERON:0003920!9.29e-08!9;UBERON:0004582!9.29e-08!9;UBERON:0000487!1.67e-07!22;UBERON:0000178!2.53e-07!15;UBERON:0000179!2.53e-07!15;UBERON:0000463!2.53e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.26e-20;3!UBERON:0004177;4.46e-12;5!UBERON:0005057;4.46e-12;5!UBERON:0002390;8.00e-09;32!UBERON:0002193;2.54e-07;42!UBERON:0000178;6.04e-07;15!UBERON:0000179;6.04e-07;15!UBERON:0000463;6.04e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.81e-20,3;UBERON:0004854,6.81e-20,3;UBERON:0009034,6.81e-20,3;UBERON:0002095,6.81e-20,3;UBERON:0004782,6.81e-20,3;UBERON:0003281,6.81e-20,3;UBERON:0009664,6.81e-20,3;UBERON:0002296,6.81e-20,3;UBERON:0005602,6.81e-20,3;UBERON:0001179,6.81e-20,3;UBERON:0006293,6.81e-20,3;UBERON:0004177,8.09e-09,7;UBERON:0005057,8.09e-09,7;UBERON:0000945,9.04e-08,8;UBERON:0010039,9.04e-08,8;UBERON:0000178,8.57e-07,15;UBERON:0000179,8.57e-07,15;UBERON:0000463,8.57e-07,15 | |||
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|short_description=p@chr19:46854101..46854113,+ | |||
}} |
Revision as of 21:23, 11 September 2013
Short description: | p@chr19:46854101..46854113, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:46854101..46854113, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.80e-10 | 52 |
lymphocyte | 3.07e-10 | 53 |
common lymphoid progenitor | 3.07e-10 | 53 |
CD8-positive, alpha-beta T cell | 1.86e-09 | 11 |
lymphocyte of B lineage | 4.88e-09 | 24 |
pro-B cell | 4.88e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.81e-20 | 3 |
gastrointestinal system mesentery | 6.81e-20 | 3 |
stomach region | 6.81e-20 | 3 |
mesentery | 6.81e-20 | 3 |
gastrointestinal system serosa | 6.81e-20 | 3 |
mesentery of stomach | 6.81e-20 | 3 |
gut mesentery | 6.81e-20 | 3 |
dorsal mesentery | 6.81e-20 | 3 |
dorsal mesogastrium | 6.81e-20 | 3 |
peritoneal cavity | 6.81e-20 | 3 |
spleen primordium | 6.81e-20 | 3 |
hemopoietic organ | 8.09e-09 | 7 |
immune organ | 8.09e-09 | 7 |
stomach | 9.04e-08 | 8 |
food storage organ | 9.04e-08 | 8 |
blood | 8.57e-07 | 15 |
haemolymphatic fluid | 8.57e-07 | 15 |
organism substance | 8.57e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.