FFCP PHASE1:Hg19::chr2:202508332..202508345,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=65062|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14432|TSSclassifier=S|UniProt=F2Z329|association_with_transcript=-39bp_to_ENST00000432684_5end|description=CAGE_peak_7_at_TMEM237_5end|id=chr2:202508332..202508345,-|ontology_enrichment_celltype=CL:0000055!1.96e-11!180;CL:0000359!4.45e-11!32;CL:0000220!1.85e-09!246;CL:0002321!4.19e-09!248;CL:0000192!2.26e-08!42;CL:0000514!2.26e-08!42;CL:0002539!2.39e-08!10;CL:0000057!1.40e-07!75|ontology_enrichment_celltype_v019=CL:0002539;5.61e-15;10!CL:0000359;5.44e-13;32!CL:0000197;1.09e-12;6!CL:0000098;1.09e-12;6!CL:0002167;1.09e-12;6!CL:0002583;2.51e-07;2!CL:0000192;5.36e-07;43!CL:0002589;6.64e-07;2|ontology_enrichment_celltype_v019_2=CL:0002539,4.41e-15,10;CL:0000359,7.58e-14,32;CL:0000197,3.40e-13,6;CL:0000098,3.40e-13,6;CL:0002167,3.40e-13,6;CL:0000057,4.51e-11,76;CL:0000192,1.59e-09,43;CL:0000514,1.59e-09,43;CL:0000187,5.23e-08,55;CL:0000680,1.96e-07,58;CL:0000056,1.96e-07,58;CL:0000355,1.96e-07,58;CL:0002583,2.83e-07,2;CL:0002589,3.11e-07,2;CL:0000393,6.44e-07,61;CL:0000211,6.44e-07,61|ontology_enrichment_development_v019=CL:0000514;5.36e-07;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004573!1.01e-14!33;UBERON:0004571!1.01e-14!33;UBERON:0000475!1.04e-12!365;UBERON:0001637!5.15e-12!42;UBERON:0003509!5.15e-12!42;UBERON:0004572!5.15e-12!42;UBERON:0000947!1.19e-10!21;UBERON:0010191!1.19e-10!21;UBERON:0002049!9.96e-10!79;UBERON:0007798!9.96e-10!79;UBERON:0000033!4.15e-09!123;UBERON:0000924!7.70e-09!173;UBERON:0006601!7.70e-09!173;UBERON:0001981!1.23e-08!60;UBERON:0007500!1.23e-08!60;UBERON:0004537!1.23e-08!60;UBERON:0006965!1.23e-08!60;UBERON:0004121!1.26e-08!169;UBERON:0004237!2.39e-08!10;UBERON:0004695!2.39e-08!10;UBERON:0002111!2.39e-08!10;UBERON:0004178!2.39e-08!10;UBERON:0000153!5.51e-08!129;UBERON:0007811!5.51e-08!129;UBERON:0004872!2.22e-07!84;UBERON:0000055!2.23e-07!69;UBERON:0003102!4.05e-07!95;UBERON:0000477!4.24e-07!286;UBERON:0000119!7.22e-07!312|ontology_enrichment_uberon_v019=UBERON:0004573;8.56e-17;33!UBERON:0004571;8.56e-17;33!UBERON:0004237;5.61e-15;10!UBERON:0004695;5.61e-15;10!UBERON:0002111;5.61e-15;10!UBERON:0004178;5.61e-15;10!UBERON:0000947;1.42e-10;21!UBERON:0010191;1.42e-10;21!UBERON:0001637;8.32e-10;42!UBERON:0003509;8.32e-10;42!UBERON:0004572;8.32e-10;42!UBERON:0001135;1.31e-09;15!UBERON:0001529;6.64e-07;2!UBERON:0007204;6.64e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0004573,4.66e-18,33;UBERON:0004571,4.66e-18,33;UBERON:0004237,4.41e-15,10;UBERON:0004695,4.41e-15,10;UBERON:0002111,4.41e-15,10;UBERON:0004178,4.41e-15,10;UBERON:0001637,2.21e-13,42;UBERON:0003509,2.21e-13,42;UBERON:0004572,2.21e-13,42;UBERON:0000947,8.83e-11,21;UBERON:0010191,8.83e-11,21;UBERON:0007500,8.66e-10,59;UBERON:0001981,8.66e-10,59;UBERON:0004537,8.66e-10,59;UBERON:0006965,8.66e-10,59;UBERON:0001135,1.12e-09,15;UBERON:0003102,2.65e-08,99;UBERON:0000055,5.32e-08,68;UBERON:0004872,1.09e-07,83;UBERON:0001529,3.11e-07,2;UBERON:0007204,3.11e-07,2;UBERON:0001134,9.31e-07,62;UBERON:0002036,9.31e-07,62;UBERON:0003082,9.31e-07,62|phase1_expression=0.363356758541113,0.214100523890983,0.845726424575827,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,2.01697543935533,2.41077811209591,0.730310090387373,1.95173119516203,0.123121058076788,0.816002764977012,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,1.0843174571537,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0.283604451492204,0.443458794925128,0.614843499851882,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.886413581652058,1.58891016975863,1.72101972449288,0.354668382198357,1.12135520028461,1.06748995729705,0.98667019366864,0,0,0.490385709340376,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0,0,0,2.37600571456411,1.48360157567134,0,0,0.168336113954066,0,0,2.19488810440419,2.45190236639216,0.901428353439581,0.567160915800105,0.538168907066586,1.2813443329114,0.211931901159562,2.40072876867522,1.75189299705346,0.772921620136887,0.930584281657949,1.0126579934476,0.487185025805993,0.757301322732344,1.38074847963449,0.161646056818812,2.13005755509969,1.0075209822764,0.339121184620975,0.773043412653187,1.09098448236334,1.14721838155602,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0.928735856063958,0,0.354920400119532,0,0,0,0.217879444092406,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=65062 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14432 | |||
|TSSclassifier=S | |||
|UniProt=F2Z329 | |||
|association_with_transcript=-39bp_to_ENST00000432684_5end | |||
|description=CAGE_peak_7_at_TMEM237_5end | |||
|id=chr2:202508332..202508345,- | |||
|ontology_enrichment_celltype=CL:0000055!1.96e-11!180;CL:0000359!4.45e-11!32;CL:0000220!1.85e-09!246;CL:0002321!4.19e-09!248;CL:0000192!2.26e-08!42;CL:0000514!2.26e-08!42;CL:0002539!2.39e-08!10;CL:0000057!1.40e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002539;5.61e-15;10!CL:0000359;5.44e-13;32!CL:0000197;1.09e-12;6!CL:0000098;1.09e-12;6!CL:0002167;1.09e-12;6!CL:0002583;2.51e-07;2!CL:0000192;5.36e-07;43!CL:0002589;6.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,4.41e-15,10;CL:0000359,7.58e-14,32;CL:0000197,3.40e-13,6;CL:0000098,3.40e-13,6;CL:0002167,3.40e-13,6;CL:0000057,4.51e-11,76;CL:0000192,1.59e-09,43;CL:0000514,1.59e-09,43;CL:0000187,5.23e-08,55;CL:0000680,1.96e-07,58;CL:0000056,1.96e-07,58;CL:0000355,1.96e-07,58;CL:0002583,2.83e-07,2;CL:0002589,3.11e-07,2;CL:0000393,6.44e-07,61;CL:0000211,6.44e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;5.36e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!1.01e-14!33;UBERON:0004571!1.01e-14!33;UBERON:0000475!1.04e-12!365;UBERON:0001637!5.15e-12!42;UBERON:0003509!5.15e-12!42;UBERON:0004572!5.15e-12!42;UBERON:0000947!1.19e-10!21;UBERON:0010191!1.19e-10!21;UBERON:0002049!9.96e-10!79;UBERON:0007798!9.96e-10!79;UBERON:0000033!4.15e-09!123;UBERON:0000924!7.70e-09!173;UBERON:0006601!7.70e-09!173;UBERON:0001981!1.23e-08!60;UBERON:0007500!1.23e-08!60;UBERON:0004537!1.23e-08!60;UBERON:0006965!1.23e-08!60;UBERON:0004121!1.26e-08!169;UBERON:0004237!2.39e-08!10;UBERON:0004695!2.39e-08!10;UBERON:0002111!2.39e-08!10;UBERON:0004178!2.39e-08!10;UBERON:0000153!5.51e-08!129;UBERON:0007811!5.51e-08!129;UBERON:0004872!2.22e-07!84;UBERON:0000055!2.23e-07!69;UBERON:0003102!4.05e-07!95;UBERON:0000477!4.24e-07!286;UBERON:0000119!7.22e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.56e-17;33!UBERON:0004571;8.56e-17;33!UBERON:0004237;5.61e-15;10!UBERON:0004695;5.61e-15;10!UBERON:0002111;5.61e-15;10!UBERON:0004178;5.61e-15;10!UBERON:0000947;1.42e-10;21!UBERON:0010191;1.42e-10;21!UBERON:0001637;8.32e-10;42!UBERON:0003509;8.32e-10;42!UBERON:0004572;8.32e-10;42!UBERON:0001135;1.31e-09;15!UBERON:0001529;6.64e-07;2!UBERON:0007204;6.64e-07;2 | |||
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| |||
|short_description=p7@TMEM237 | |||
}} |
Revision as of 16:03, 12 September 2013
Short description: | p7@TMEM237 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TMEM237_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000432684_5end |
EntrezGene: | TMEM237 |
HGNC: | 14432 |
UniProt: | F2Z329 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 4.41e-15 | 10 |
vascular associated smooth muscle cell | 7.58e-14 | 32 |
receptor cell | 3.40e-13 | 6 |
sensory epithelial cell | 3.40e-13 | 6 |
olfactory epithelial cell | 3.40e-13 | 6 |
fibroblast | 4.51e-11 | 76 |
smooth muscle cell | 1.59e-09 | 43 |
smooth muscle myoblast | 1.59e-09 | 43 |
muscle cell | 5.23e-08 | 55 |
muscle precursor cell | 1.96e-07 | 58 |
myoblast | 1.96e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.96e-07 | 58 |
subcutaneous preadipocyte | 2.83e-07 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 3.11e-07 | 2 |
electrically responsive cell | 6.44e-07 | 61 |
electrically active cell | 6.44e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 4.66e-18 | 33 |
systemic arterial system | 4.66e-18 | 33 |
blood vessel smooth muscle | 4.41e-15 | 10 |
arterial system smooth muscle | 4.41e-15 | 10 |
artery smooth muscle tissue | 4.41e-15 | 10 |
aorta smooth muscle tissue | 4.41e-15 | 10 |
artery | 2.21e-13 | 42 |
arterial blood vessel | 2.21e-13 | 42 |
arterial system | 2.21e-13 | 42 |
aorta | 8.83e-11 | 21 |
aortic system | 8.83e-11 | 21 |
epithelial tube open at both ends | 8.66e-10 | 59 |
blood vessel | 8.66e-10 | 59 |
blood vasculature | 8.66e-10 | 59 |
vascular cord | 8.66e-10 | 59 |
smooth muscle tissue | 1.12e-09 | 15 |
surface structure | 2.65e-08 | 99 |
vessel | 5.32e-08 | 68 |
splanchnic layer of lateral plate mesoderm | 1.09e-07 | 83 |
brachiocephalic artery | 3.11e-07 | 2 |
brachiocephalic vasculature | 3.11e-07 | 2 |
skeletal muscle tissue | 9.31e-07 | 62 |
striated muscle tissue | 9.31e-07 | 62 |
myotome | 9.31e-07 | 62 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.