FFCP PHASE1:Hg19::chr2:220309797..220309812,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10290|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16901|TSSclassifier=S|UniProt=|association_with_transcript=-460bp_to_ENST00000497065_5end|coexpression_cluster_id=C1894|description=CAGE_peak_16_at_SPEG_5end|id=chr2:220309797..220309812,+|ontology_enrichment_celltype=CL:0000077!3.98e-07!19|ontology_enrichment_celltype_v019=CL:0000077;2.15e-20;19!CL:0002097;4.18e-09;2|ontology_enrichment_celltype_v019_2=CL:0000077,2.24e-20,19;CL:0002097,4.34e-09,2|ontology_enrichment_development_v019=UBERON:0004874;1.93e-16;1!UBERON:0006965;4.88e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5662;1.93e-16;1!DOID:3307;6.93e-09;2|ontology_enrichment_disease_v019_2=DOID:5662,1.41e-16,1;DOID:3307,5.49e-09,2|ontology_enrichment_uberon=UBERON:0007023!1.36e-22!115;UBERON:0003075!2.93e-10!86;UBERON:0007284!2.93e-10!86;UBERON:0002346!1.44e-09!90;UBERON:0001950!2.08e-08!20;UBERON:0002780!8.09e-08!41;UBERON:0001890!8.09e-08!41;UBERON:0006240!8.09e-08!41;UBERON:0003080!1.42e-07!42;UBERON:0002619!1.54e-07!22;UBERON:0001869!2.25e-07!32;UBERON:0002791!4.28e-07!33;UBERON:0003056!4.35e-07!61;UBERON:0000007!7.62e-07!2;UBERON:0002020!7.84e-07!34;UBERON:0003528!7.84e-07!34;UBERON:0001893!7.84e-07!34;UBERON:0000073!8.38e-07!94;UBERON:0001016!8.38e-07!94;UBERON:0001049!9.52e-07!57;UBERON:0005068!9.52e-07!57;UBERON:0006241!9.52e-07!57;UBERON:0007135!9.52e-07!57|ontology_enrichment_uberon_v019=UBERON:0000989;1.93e-16;1!UBERON:0002146;1.93e-16;1!UBERON:0008811;1.93e-16;1!UBERON:0005623;1.93e-16;1|ontology_enrichment_uberon_v019_2=UBERON:0000989,1.93e-16,1;UBERON:0008811,1.93e-16,1;UBERON:0006258,1.93e-16,1;UBERON:0005876,1.93e-16,1;UBERON:0004874,1.93e-16,1;UBERON:0002146,3.07e-16,1;UBERON:0005623,3.07e-16,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.337552664482532,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52159065589379,0.871533458600294,6.79816340037988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,2.98871982376605,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.14580212005842,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,2.5926644736038,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,1.52322084867518,0,0,0.107410557042488,0,0,0,0,0,0,0,4.50327341887344,1.30497145982606,0,0,0,0.71635536432595,0,0,0,10.8031861431712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.41023272848151,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,1.48863353516788,0,0,0,0,0.606965604236632,0.227662191351298,0,0,1.71488009437418,0.0679697329768317,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.154348316215889,0,0,1.22574160876953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0.215166616178029,0.332660356546013,0,0,1.9307228228694,0,0,0.122241444182866,0,0,0.201273793591026,0|short_description=p16@SPEG}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10290 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16901 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-460bp_to_ENST00000497065_5end | |||
|coexpression_cluster_id=C1894 | |||
|description=CAGE_peak_16_at_SPEG_5end | |||
|id=chr2:220309797..220309812,+ | |||
|ontology_enrichment_celltype=CL:0000077!3.98e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.15e-20;19!CL:0002097;4.18e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.24e-20,19;CL:0002097,4.34e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.93e-16;1!UBERON:0006965;4.88e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;1.93e-16;1!DOID:3307;6.93e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.41e-16,1;DOID:3307,5.49e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.36e-22!115;UBERON:0003075!2.93e-10!86;UBERON:0007284!2.93e-10!86;UBERON:0002346!1.44e-09!90;UBERON:0001950!2.08e-08!20;UBERON:0002780!8.09e-08!41;UBERON:0001890!8.09e-08!41;UBERON:0006240!8.09e-08!41;UBERON:0003080!1.42e-07!42;UBERON:0002619!1.54e-07!22;UBERON:0001869!2.25e-07!32;UBERON:0002791!4.28e-07!33;UBERON:0003056!4.35e-07!61;UBERON:0000007!7.62e-07!2;UBERON:0002020!7.84e-07!34;UBERON:0003528!7.84e-07!34;UBERON:0001893!7.84e-07!34;UBERON:0000073!8.38e-07!94;UBERON:0001016!8.38e-07!94;UBERON:0001049!9.52e-07!57;UBERON:0005068!9.52e-07!57;UBERON:0006241!9.52e-07!57;UBERON:0007135!9.52e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;1.93e-16;1!UBERON:0002146;1.93e-16;1!UBERON:0008811;1.93e-16;1!UBERON:0005623;1.93e-16;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,1.93e-16,1;UBERON:0008811,1.93e-16,1;UBERON:0006258,1.93e-16,1;UBERON:0005876,1.93e-16,1;UBERON:0004874,1.93e-16,1;UBERON:0002146,3.07e-16,1;UBERON:0005623,3.07e-16,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.337552664482532,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52159065589379,0.871533458600294,6.79816340037988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,2.98871982376605,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.14580212005842,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,2.5926644736038,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,1.52322084867518,0,0,0.107410557042488,0,0,0,0,0,0,0,4.50327341887344,1.30497145982606,0,0,0,0.71635536432595,0,0,0,10.8031861431712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.41023272848151,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,1.48863353516788,0,0,0,0,0.606965604236632,0.227662191351298,0,0,1.71488009437418,0.0679697329768317,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.154348316215889,0,0,1.22574160876953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0.215166616178029,0.332660356546013,0,0,1.9307228228694,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p16@SPEG | |||
}} |
Revision as of 17:00, 12 September 2013
Short description: | p16@SPEG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_SPEG_5end |
Coexpression cluster: | C1894_mesothelioma_Mesothelial_aorta_mesenchymal_pleomorphic_heart_leiomyoma |
Association with transcript: | -460bp_to_ENST00000497065_5end |
EntrezGene: | SPEG |
HGNC: | 16901 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.24e-20 | 19 |
cortical cell of adrenal gland | 4.34e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
penis | 1.93e-16 | 1 |
intromittent organ | 1.93e-16 | 1 |
lateral plate mesenchyme | 1.93e-16 | 1 |
undifferentiated genital tubercle | 1.93e-16 | 1 |
somatopleure | 1.93e-16 | 1 |
pulmonary valve | 3.07e-16 | 1 |
semi-lunar valve | 3.07e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.41e-16 | 1 |
teratoma | 5.49e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.