FFCP PHASE1:Hg19::chr20:31375131..31375149,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C49|description=CAGE_peak_at_chr20:31375131..31375149,-|id=chr20:31375131..31375149,-|ontology_enrichment_celltype=CL:0000039!1.86e-18!7;CL:0000586!1.86e-18!7;CL:0002322!9.25e-15!5|ontology_enrichment_celltype_v019=CL:0002322;1.08e-70;5!CL:0002321;1.03e-23;15!CL:0000540;2.93e-22;6!CL:0000404;2.93e-22;6!CL:0000039;1.06e-18;7!CL:0000586;1.06e-18;7!CL:0000148;2.21e-13;10!CL:0000147;9.95e-10;14!CL:0000710;5.74e-07;20|ontology_enrichment_celltype_v019_2=CL:0002322,1.16e-70,5;CL:0000540,2.83e-22,6;CL:0000031,2.83e-22,6;CL:0000404,2.83e-22,6;CL:0000039,1.16e-18,7;CL:0000586,1.16e-18,7;CL:0000047,7.03e-17,8;CL:0000148,2.07e-13,10;CL:0000541,2.07e-13,10;CL:0000147,9.52e-10,14;CL:0000133,3.48e-08,59;CL:0000710,5.56e-07,20|ontology_enrichment_development_v019=CL:0000031;2.93e-22;6!UBERON:0009117;2.73e-13;10!UBERON:0005564;2.73e-13;10|ontology_enrichment_disease=DOID:3095!1.86e-12!22;DOID:2994!1.86e-12!22;DOID:162!2.95e-12!235;DOID:14566!9.26e-12!239;DOID:1036!6.40e-11!8;DOID:1240!1.58e-09!39;DOID:8692!2.53e-09!31;DOID:2531!1.47e-07!51;DOID:0060083!1.47e-07!51;DOID:0050687!3.00e-07!143|ontology_enrichment_disease_v019=DOID:3095;1.62e-10;22!DOID:2994;1.62e-10;22|ontology_enrichment_disease_v019_2=DOID:3095,1.75e-10,22;DOID:2994,1.75e-10,22|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000473;1.89e-16;8!UBERON:0003135;3.87e-12;11!UBERON:0000922;2.06e-10;49|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.04e-16,8;UBERON:0003135,4.10e-12,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,3.90315859614705,2.12047629314376,4.18298194330266,1.45125477021519,1.51392510525377,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,1.56869953835371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0,0.159426272728822,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0.179515288819544,0.217294743844016,0,0,0,0,0.156980256395025,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0.158936578980379,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,4.34033500855552,3.98864366131978,2.49264202817511,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0,0,0,0,0,0.20170506870352,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0.756998549010474,1.31118686356435,0,1.32585478664576,2.93939145792117,0.275684698604535,1.25353769646188,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr20:31375131..31375149,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr20:31375131..31375149,- | |||
|id=chr20:31375131..31375149,- | |||
|ontology_enrichment_celltype=CL:0000039!1.86e-18!7;CL:0000586!1.86e-18!7;CL:0002322!9.25e-15!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.08e-70;5!CL:0002321;1.03e-23;15!CL:0000540;2.93e-22;6!CL:0000404;2.93e-22;6!CL:0000039;1.06e-18;7!CL:0000586;1.06e-18;7!CL:0000148;2.21e-13;10!CL:0000147;9.95e-10;14!CL:0000710;5.74e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.16e-70,5;CL:0000540,2.83e-22,6;CL:0000031,2.83e-22,6;CL:0000404,2.83e-22,6;CL:0000039,1.16e-18,7;CL:0000586,1.16e-18,7;CL:0000047,7.03e-17,8;CL:0000148,2.07e-13,10;CL:0000541,2.07e-13,10;CL:0000147,9.52e-10,14;CL:0000133,3.48e-08,59;CL:0000710,5.56e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000031;2.93e-22;6!UBERON:0009117;2.73e-13;10!UBERON:0005564;2.73e-13;10 | |||
|ontology_enrichment_disease=DOID:3095!1.86e-12!22;DOID:2994!1.86e-12!22;DOID:162!2.95e-12!235;DOID:14566!9.26e-12!239;DOID:1036!6.40e-11!8;DOID:1240!1.58e-09!39;DOID:8692!2.53e-09!31;DOID:2531!1.47e-07!51;DOID:0060083!1.47e-07!51;DOID:0050687!3.00e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.62e-10;22!DOID:2994;1.62e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.75e-10,22;DOID:2994,1.75e-10,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.89e-16;8!UBERON:0003135;3.87e-12;11!UBERON:0000922;2.06e-10;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.04e-16,8;UBERON:0003135,4.10e-12,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,3.90315859614705,2.12047629314376,4.18298194330266,1.45125477021519,1.51392510525377,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,1.56869953835371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0,0.159426272728822,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0.179515288819544,0.217294743844016,0,0,0,0,0.156980256395025,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0.158936578980379,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,4.34033500855552,3.98864366131978,2.49264202817511,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0,0,0,0,0,0.20170506870352,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0.756998549010474,1.31118686356435,0,1.32585478664576,2.93939145792117,0.275684698604535,1.25353769646188,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:31375131..31375149,- | |||
}} |
Revision as of 08:02, 12 September 2013
Short description: | p@chr20:31375131..31375149, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:31375131..31375149, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.16e-70 | 5 |
neuron | 2.83e-22 | 6 |
neuroblast | 2.83e-22 | 6 |
electrically signaling cell | 2.83e-22 | 6 |
germ line cell | 1.16e-18 | 7 |
germ cell | 1.16e-18 | 7 |
neuronal stem cell | 7.03e-17 | 8 |
melanocyte | 2.07e-13 | 10 |
melanoblast | 2.07e-13 | 10 |
pigment cell | 9.52e-10 | 14 |
neurectodermal cell | 3.48e-08 | 59 |
neurecto-epithelial cell | 5.56e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 2.04e-16 | 8 |
male reproductive organ | 4.10e-12 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.75e-10 | 22 |
germ cell cancer | 1.75e-10 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.