FFCP PHASE1:Hg19::chr20:61051039..61051057,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=140628|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15802|TSSclassifier=S|UniProt=Q9BWX5,D9ZGF7|association_with_transcript=-13bp_to_ENST00000252997,ENST00000540404,NM_080473,uc002ycx.1_5end|description=CAGE_peak_1_at_GATA5_5end|id=chr20:61051039..61051057,-|ontology_enrichment_celltype=CL:0000077!4.65e-08!19|ontology_enrichment_celltype_v019=CL:0002548;7.25e-07;6|ontology_enrichment_celltype_v019_2=CL:0002548,9.14e-07,6|ontology_enrichment_development_v019=UBERON:0009117;3.23e-09;10!UBERON:0005564;3.23e-09;10!UBERON:0006603;4.98e-08;65!UBERON:0005062;5.42e-07;4!UBERON:0007284;5.42e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.20e-12!115;UBERON:0007100!3.24e-10!27;UBERON:0000948!1.21e-07!24;UBERON:0005498!1.21e-07!24;UBERON:0004140!1.21e-07!24;UBERON:0009881!1.21e-07!24;UBERON:0004141!1.21e-07!24;UBERON:0003084!1.21e-07!24;UBERON:0007005!1.21e-07!24;UBERON:0004139!1.21e-07!24;UBERON:0004291!1.21e-07!24;UBERON:0003103!1.83e-07!69;UBERON:0001048!9.78e-07!168|ontology_enrichment_uberon_v019=UBERON:0007100;3.94e-15;25!UBERON:0000948;1.44e-12;22!UBERON:0003978;3.25e-09;3!UBERON:0000946;3.25e-09;3!UBERON:0003135;2.28e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.79e-16,27;UBERON:0000948,1.89e-13,24;UBERON:0005498,1.89e-13,24;UBERON:0004140,1.89e-13,24;UBERON:0009881,1.89e-13,24;UBERON:0004141,1.89e-13,24;UBERON:0003084,1.89e-13,24;UBERON:0007005,1.89e-13,24;UBERON:0004139,1.89e-13,24;UBERON:0004291,1.89e-13,24;UBERON:0007023,1.71e-09,114;UBERON:0003978,3.25e-09,3;UBERON:0009751,3.25e-09,3;UBERON:0000946,3.25e-09,3;UBERON:0002523,3.25e-09,3;UBERON:0005983,3.25e-09,3;UBERON:0002165,3.25e-09,3;UBERON:0002062,3.25e-09,3;UBERON:0007280,3.25e-09,3;UBERON:0003135,1.79e-08,11;UBERON:0003103,2.67e-08,68;UBERON:0001048,7.40e-08,160;UBERON:0002133,9.90e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36560687762909,5.75381528295886,0,0,0,0,0,0,0,0.175669571386252,7.7932549921139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.709336764396714,2.24271040056923,1.06748995729705,0,1.24484414159907,1.34710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38207584636044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,3.25343040034651,0.932949495138334,2.01856680700503,0,0,0,0,0,0,0.354920400119532,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.0050745253498,7.84380112740265,23.2937069454193,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,1.31205858279882,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3634963469716,4.92349595790849,11.0886828175153,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.996239941255349,0,0,0,0,0,0,0,0,14.1060070060815,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.139423744278603,4.69396576873162,0.113942055847001,0.69169171316418,0,0.869178975376065,0,0,0,0,0,6.64846727600626,0,0.784250137270958,0,1.13852239634511,0,0,0,0,0,0,16.0108191751044,2.4441205797345,0,0,0,0,0,0,0,0,0,5.91876604274086,6.04953580243319,0,1.01098527405581,0,0.414752765588989,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0.290967049465258,0.529536760149002,0,0,0,0,2.34661659281764,0,22.8394704371107,0.799238438328521,0,0,0,0,1.36677789121976,0.471388069233591,0.67952103036807,0.836822770498666,0,0,0,0,0,11.6036669183388,0,11.4505784521624,5.27068975226872,3.58936512288407,0.798716001995964,1.71690419254628,2.23171457441873,2.21705459206197,0,4.65983798109815,0.0787831823072236,0.164831716762333,0,0.0984274815147488,0,0,0,0.482259445395058,0.550157746388935,0.415440338029185,0,0,0.0607495566580247,0,3.15222829196793,8.65500704227469,0,0.179287339332845,0,10.0057345692271,0,0,0,0,0.326587360109409,0,0.328370082997356,0,0,0.58620893471233,7.95041333473328,0,0,0,0,1.06787412567695,5.81655928868764,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0.465788870628778,0,0.2658417145579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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=140628 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15802 | |||
|TSSclassifier=S | |||
|UniProt=Q9BWX5,D9ZGF7 | |||
|association_with_transcript=-13bp_to_ENST00000252997,ENST00000540404,NM_080473,uc002ycx.1_5end | |||
|description=CAGE_peak_1_at_GATA5_5end | |||
|id=chr20:61051039..61051057,- | |||
|ontology_enrichment_celltype=CL:0000077!4.65e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0002548;7.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,9.14e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.23e-09;10!UBERON:0005564;3.23e-09;10!UBERON:0006603;4.98e-08;65!UBERON:0005062;5.42e-07;4!UBERON:0007284;5.42e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-12!115;UBERON:0007100!3.24e-10!27;UBERON:0000948!1.21e-07!24;UBERON:0005498!1.21e-07!24;UBERON:0004140!1.21e-07!24;UBERON:0009881!1.21e-07!24;UBERON:0004141!1.21e-07!24;UBERON:0003084!1.21e-07!24;UBERON:0007005!1.21e-07!24;UBERON:0004139!1.21e-07!24;UBERON:0004291!1.21e-07!24;UBERON:0003103!1.83e-07!69;UBERON:0001048!9.78e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.94e-15;25!UBERON:0000948;1.44e-12;22!UBERON:0003978;3.25e-09;3!UBERON:0000946;3.25e-09;3!UBERON:0003135;2.28e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.79e-16,27;UBERON:0000948,1.89e-13,24;UBERON:0005498,1.89e-13,24;UBERON:0004140,1.89e-13,24;UBERON:0009881,1.89e-13,24;UBERON:0004141,1.89e-13,24;UBERON:0003084,1.89e-13,24;UBERON:0007005,1.89e-13,24;UBERON:0004139,1.89e-13,24;UBERON:0004291,1.89e-13,24;UBERON:0007023,1.71e-09,114;UBERON:0003978,3.25e-09,3;UBERON:0009751,3.25e-09,3;UBERON:0000946,3.25e-09,3;UBERON:0002523,3.25e-09,3;UBERON:0005983,3.25e-09,3;UBERON:0002165,3.25e-09,3;UBERON:0002062,3.25e-09,3;UBERON:0007280,3.25e-09,3;UBERON:0003135,1.79e-08,11;UBERON:0003103,2.67e-08,68;UBERON:0001048,7.40e-08,160;UBERON:0002133,9.90e-07,2 | |||
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|short_description=p1@GATA5 | |||
}} |
Revision as of 09:31, 12 September 2013
Short description: | p1@GATA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GATA5_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000252997, ENST00000540404, NM_080473, uc002ycx.1_5end |
EntrezGene: | GATA5 |
HGNC: | 15802 |
UniProt: | Q9BWX5D9ZGF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 9.14e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 4.79e-16 | 27 |
heart | 1.89e-13 | 24 |
primitive heart tube | 1.89e-13 | 24 |
primary heart field | 1.89e-13 | 24 |
anterior lateral plate mesoderm | 1.89e-13 | 24 |
heart tube | 1.89e-13 | 24 |
heart primordium | 1.89e-13 | 24 |
cardiac mesoderm | 1.89e-13 | 24 |
cardiogenic plate | 1.89e-13 | 24 |
heart rudiment | 1.89e-13 | 24 |
adult organism | 1.71e-09 | 114 |
valve | 3.25e-09 | 3 |
cardiac mesenchyme | 3.25e-09 | 3 |
cardial valve | 3.25e-09 | 3 |
tunica intima | 3.25e-09 | 3 |
heart layer | 3.25e-09 | 3 |
endocardium | 3.25e-09 | 3 |
endocardial cushion | 3.25e-09 | 3 |
presumptive endocardium | 3.25e-09 | 3 |
male reproductive organ | 1.79e-08 | 11 |
compound organ | 2.67e-08 | 68 |
primordium | 7.40e-08 | 160 |
atrioventricular valve | 9.90e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.