FFCP PHASE1:Hg19::chr3:13921578..13921591,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7476|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12786|TSSclassifier=S|UniProt=O00755|association_with_transcript=26bp_to_ENST00000285018,NM_004625,uc003bye.1_5end|coexpression_cluster_id=C1269|description=CAGE_peak_3_at_WNT7A_5end|id=chr3:13921578..13921591,-|ontology_enrichment_celltype=CL:0002076!7.21e-15!43;CL:0002159!2.49e-10!13;CL:0000223!6.60e-10!59;CL:0002368!1.16e-09!13;CL:0000066!2.29e-08!254;CL:0000791!5.23e-08!18;CL:0000789!5.23e-08!18;CL:0002420!5.23e-08!18;CL:0002419!5.23e-08!18;CL:0000790!5.23e-08!18;CL:0000624!9.82e-07!6|ontology_enrichment_celltype_v019=CL:0002159;4.36e-16;14!CL:0002076;7.15e-16;42!CL:0002368;9.69e-14;13!CL:1000507;1.02e-11;10!CL:1000494;1.02e-11;10!CL:0000244;6.08e-10;4!CL:0000731;6.08e-10;4!CL:0000240;1.19e-08;6!CL:0000311;1.19e-08;6!CL:0000079;1.19e-08;6!CL:0000237;1.19e-08;6!CL:0002202;7.74e-08;9!CL:0002632;7.74e-08;9!CL:0000624;1.02e-07;6!CL:0002621;1.13e-07;3!CL:0000362;1.44e-07;9!CL:0002166;2.67e-07;3!CL:1000449;2.78e-07;15!CL:0002328;3.94e-07;3!CL:0000312;5.58e-07;5!CL:0002541;6.72e-07;3!CL:0000307;9.70e-07;3|ontology_enrichment_celltype_v019_2=CL:0002076,3.76e-21,42;CL:0002159,3.58e-16,14;CL:0000066,1.54e-15,253;CL:0000223,1.09e-14,58;CL:0002368,7.05e-14,13;CL:1000507,1.12e-11,10;CL:1000494,1.12e-11,10;CL:0000244,6.17e-10,4;CL:0000731,6.17e-10,4;CL:0000240,1.19e-08,6;CL:0000311,1.19e-08,6;CL:0000079,1.19e-08,6;CL:0000237,1.19e-08,6;CL:0000036,1.19e-08,6;CL:0000357,1.19e-08,6;CL:0000114,1.19e-08,6;CL:0002202,6.94e-08,9;CL:0002632,6.94e-08,9;CL:0000624,8.07e-08,6;CL:0000362,1.18e-07,9;CL:0002621,1.20e-07,3;CL:0002166,2.88e-07,3;CL:1000449,2.95e-07,15;CL:0002328,3.39e-07,3;CL:0002077,3.80e-07,34;CL:0000312,5.47e-07,5;CL:0002541,6.22e-07,3;CL:0000068,9.44e-07,3;CL:0000069,9.44e-07,3;CL:0000307,9.44e-07,3;CL:0000377,9.44e-07,3|ontology_enrichment_development_v019=CL:0000357;1.19e-08;6!CL:0000114;1.19e-08;6!CL:0000223;3.33e-08;58!CL:0000377;9.70e-07;3|ontology_enrichment_disease=DOID:1749!5.49e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.30e-11!57;UBERON:0005068!3.30e-11!57;UBERON:0006241!3.30e-11!57;UBERON:0007135!3.30e-11!57;UBERON:0004121!9.42e-11!169;UBERON:0001893!1.15e-10!34;UBERON:0002020!1.17e-10!34;UBERON:0003528!1.17e-10!34;UBERON:0000064!1.40e-10!219;UBERON:0000924!1.66e-10!173;UBERON:0006601!1.66e-10!173;UBERON:0002791!3.31e-10!33;UBERON:0001869!8.31e-10!32;UBERON:0001017!1.45e-09!82;UBERON:0002780!3.27e-09!41;UBERON:0001890!3.27e-09!41;UBERON:0006240!3.27e-09!41;UBERON:0003080!8.02e-09!42;UBERON:0005743!1.32e-08!86;UBERON:0002619!1.52e-08!22;UBERON:0002616!3.51e-08!59;UBERON:0000033!3.78e-08!123;UBERON:0000955!6.21e-08!69;UBERON:0006238!6.21e-08!69;UBERON:0000956!8.00e-08!25;UBERON:0000203!8.00e-08!25;UBERON:0000153!1.10e-07!129;UBERON:0007811!1.10e-07!129;UBERON:0000365!1.68e-07!5;UBERON:0001950!1.98e-07!20;UBERON:0003075!5.35e-07!86;UBERON:0007284!5.35e-07!86;UBERON:0000073!8.50e-07!94;UBERON:0001016!8.50e-07!94|ontology_enrichment_uberon_v019=UBERON:0000365;6.13e-12;5!UBERON:0004211;1.02e-11;10!UBERON:0009773;1.02e-11;10!UBERON:0001231;1.02e-11;10!UBERON:0004810;1.02e-11;10!UBERON:0000486;2.63e-11;12!UBERON:0005910;7.79e-10;6!UBERON:0006554;6.38e-09;30!UBERON:0001008;6.38e-09;30!UBERON:0005631;1.88e-08;10!UBERON:0000158;1.88e-08;10!UBERON:0001949;1.13e-07;3!UBERON:0006555;2.78e-07;15!UBERON:0004819;2.78e-07;15!UBERON:0001285;2.78e-07;15!UBERON:0007684;2.78e-07;15!UBERON:0004815;3.94e-07;3!UBERON:0002031;3.94e-07;3!UBERON:0003124;6.72e-07;3!UBERON:0000920;6.72e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000365,6.16e-12,5;UBERON:0004810,1.12e-11,10;UBERON:0005910,7.82e-10,6;UBERON:0006554,2.44e-08,47;UBERON:0001008,4.48e-08,48;UBERON:0001949,1.20e-07,3;UBERON:0005631,2.04e-07,14;UBERON:0000158,2.04e-07,14;UBERON:0004211,2.95e-07,15;UBERON:0009773,2.95e-07,15;UBERON:0001231,2.95e-07,15;UBERON:0001285,2.95e-07,15;UBERON:0007684,2.95e-07,15;UBERON:0004208,2.95e-07,15;UBERON:0004815,3.39e-07,3;UBERON:0002031,3.39e-07,3;UBERON:0000920,6.22e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0,1.09220686065086,1.84636884759917,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0.154816123316076,9.19421224478927,15.3615018576908,2.9580320813343,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75393678159366,5.89516144123747,4.72883447698871,0,1.62961133316795,0.946895611469467,0,0,0.883817722424512,0,0,0,0,0.164437904603676,0,0,5.93146252648242,6.42097987415311,7.31748666634838,0,1.53288197440768,4.12352934579156,2.27717722817553,0.318565414324097,0,0,1.05402583354441,0.511946444617674,0,0.473554504088034,0.821127996921047,0.80642697289893,0.534880391567015,0.868946423296794,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.261958150995425,13.4789256668241,7.78647329847302,0,0.174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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7476 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12786 | |||
|TSSclassifier=S | |||
|UniProt=O00755 | |||
|association_with_transcript=26bp_to_ENST00000285018,NM_004625,uc003bye.1_5end | |||
|coexpression_cluster_id=C1269 | |||
|description=CAGE_peak_3_at_WNT7A_5end | |||
|id=chr3:13921578..13921591,- | |||
|ontology_enrichment_celltype=CL:0002076!7.21e-15!43;CL:0002159!2.49e-10!13;CL:0000223!6.60e-10!59;CL:0002368!1.16e-09!13;CL:0000066!2.29e-08!254;CL:0000791!5.23e-08!18;CL:0000789!5.23e-08!18;CL:0002420!5.23e-08!18;CL:0002419!5.23e-08!18;CL:0000790!5.23e-08!18;CL:0000624!9.82e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002159;4.36e-16;14!CL:0002076;7.15e-16;42!CL:0002368;9.69e-14;13!CL:1000507;1.02e-11;10!CL:1000494;1.02e-11;10!CL:0000244;6.08e-10;4!CL:0000731;6.08e-10;4!CL:0000240;1.19e-08;6!CL:0000311;1.19e-08;6!CL:0000079;1.19e-08;6!CL:0000237;1.19e-08;6!CL:0002202;7.74e-08;9!CL:0002632;7.74e-08;9!CL:0000624;1.02e-07;6!CL:0002621;1.13e-07;3!CL:0000362;1.44e-07;9!CL:0002166;2.67e-07;3!CL:1000449;2.78e-07;15!CL:0002328;3.94e-07;3!CL:0000312;5.58e-07;5!CL:0002541;6.72e-07;3!CL:0000307;9.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.76e-21,42;CL:0002159,3.58e-16,14;CL:0000066,1.54e-15,253;CL:0000223,1.09e-14,58;CL:0002368,7.05e-14,13;CL:1000507,1.12e-11,10;CL:1000494,1.12e-11,10;CL:0000244,6.17e-10,4;CL:0000731,6.17e-10,4;CL:0000240,1.19e-08,6;CL:0000311,1.19e-08,6;CL:0000079,1.19e-08,6;CL:0000237,1.19e-08,6;CL:0000036,1.19e-08,6;CL:0000357,1.19e-08,6;CL:0000114,1.19e-08,6;CL:0002202,6.94e-08,9;CL:0002632,6.94e-08,9;CL:0000624,8.07e-08,6;CL:0000362,1.18e-07,9;CL:0002621,1.20e-07,3;CL:0002166,2.88e-07,3;CL:1000449,2.95e-07,15;CL:0002328,3.39e-07,3;CL:0002077,3.80e-07,34;CL:0000312,5.47e-07,5;CL:0002541,6.22e-07,3;CL:0000068,9.44e-07,3;CL:0000069,9.44e-07,3;CL:0000307,9.44e-07,3;CL:0000377,9.44e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;1.19e-08;6!CL:0000114;1.19e-08;6!CL:0000223;3.33e-08;58!CL:0000377;9.70e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!5.49e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.30e-11!57;UBERON:0005068!3.30e-11!57;UBERON:0006241!3.30e-11!57;UBERON:0007135!3.30e-11!57;UBERON:0004121!9.42e-11!169;UBERON:0001893!1.15e-10!34;UBERON:0002020!1.17e-10!34;UBERON:0003528!1.17e-10!34;UBERON:0000064!1.40e-10!219;UBERON:0000924!1.66e-10!173;UBERON:0006601!1.66e-10!173;UBERON:0002791!3.31e-10!33;UBERON:0001869!8.31e-10!32;UBERON:0001017!1.45e-09!82;UBERON:0002780!3.27e-09!41;UBERON:0001890!3.27e-09!41;UBERON:0006240!3.27e-09!41;UBERON:0003080!8.02e-09!42;UBERON:0005743!1.32e-08!86;UBERON:0002619!1.52e-08!22;UBERON:0002616!3.51e-08!59;UBERON:0000033!3.78e-08!123;UBERON:0000955!6.21e-08!69;UBERON:0006238!6.21e-08!69;UBERON:0000956!8.00e-08!25;UBERON:0000203!8.00e-08!25;UBERON:0000153!1.10e-07!129;UBERON:0007811!1.10e-07!129;UBERON:0000365!1.68e-07!5;UBERON:0001950!1.98e-07!20;UBERON:0003075!5.35e-07!86;UBERON:0007284!5.35e-07!86;UBERON:0000073!8.50e-07!94;UBERON:0001016!8.50e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;6.13e-12;5!UBERON:0004211;1.02e-11;10!UBERON:0009773;1.02e-11;10!UBERON:0001231;1.02e-11;10!UBERON:0004810;1.02e-11;10!UBERON:0000486;2.63e-11;12!UBERON:0005910;7.79e-10;6!UBERON:0006554;6.38e-09;30!UBERON:0001008;6.38e-09;30!UBERON:0005631;1.88e-08;10!UBERON:0000158;1.88e-08;10!UBERON:0001949;1.13e-07;3!UBERON:0006555;2.78e-07;15!UBERON:0004819;2.78e-07;15!UBERON:0001285;2.78e-07;15!UBERON:0007684;2.78e-07;15!UBERON:0004815;3.94e-07;3!UBERON:0002031;3.94e-07;3!UBERON:0003124;6.72e-07;3!UBERON:0000920;6.72e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,6.16e-12,5;UBERON:0004810,1.12e-11,10;UBERON:0005910,7.82e-10,6;UBERON:0006554,2.44e-08,47;UBERON:0001008,4.48e-08,48;UBERON:0001949,1.20e-07,3;UBERON:0005631,2.04e-07,14;UBERON:0000158,2.04e-07,14;UBERON:0004211,2.95e-07,15;UBERON:0009773,2.95e-07,15;UBERON:0001231,2.95e-07,15;UBERON:0001285,2.95e-07,15;UBERON:0007684,2.95e-07,15;UBERON:0004208,2.95e-07,15;UBERON:0004815,3.39e-07,3;UBERON:0002031,3.39e-07,3;UBERON:0000920,6.22e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0,1.09220686065086,1.84636884759917,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0.154816123316076,9.19421224478927,15.3615018576908,2.9580320813343,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75393678159366,5.89516144123747,4.72883447698871,0,1.62961133316795,0.946895611469467,0,0,0.883817722424512,0,0,0,0,0.164437904603676,0,0,5.93146252648242,6.42097987415311,7.31748666634838,0,1.53288197440768,4.12352934579156,2.27717722817553,0.318565414324097,0,0,1.05402583354441,0.511946444617674,0,0.473554504088034,0.821127996921047,0.80642697289893,0.534880391567015,0.868946423296794,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.261958150995425,13.4789256668241,7.78647329847302,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,3.92484646928281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4271725188802,13.0918137883601,11.1853792201711,0,0,0.464775771478074,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,8.78002283269004,8.99214026060957,13.8729981928051,4.44424536760942,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,6.56136837907439,6.2153387433578,11.3420077793909,0.806026704325635,2.03443756959773,7.28427090413901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,1.2937654491571,1.54011643535698,0,2.60279707715243,0.773288812777695,1.67516265334349,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.07857100409308,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0253235151642,2.5782676902051,0,0,0,6.76799419361118,3.31165949548983,2.35304930753057,4.38417673959782,3.58875538235777,0,0,0,0,0,0,6.88165937221603,8.31076008928724,1.56712328305525,0,0,0,0,0,0.824328093181778,0,0,1.72279661398852,4.55042172225565,0,0,0,0,0,0,0,0,0,4.95854746082934,3.65161127993702,4.33883222481586,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.83177000351136,2.68120910214315,4.3556393944529,0.564862804660675,24.1083008695889,18.5318623234388,16.406915680857,23.2020634209029,0.507447609232169,0,1.13929437434833,0.476463550915578,0.411362273086194,0.648473311192717,0,0,0,0,3.43056302373444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7748896947538,0.593929361665277,1.22864280839693,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0.808815160325942,0,0,0,0,0,0.969332746095218,0.371072392647405,1.99613798001194,0,0,0,0.796554137998498,0,0.236387681767936,1.37897349296586,0,0,0.885741385813839,0.120596438625408,0,0,0.295547618953547,0,0,0.278847488557207,0,0,4.6112780877612,4.48788222048861,14.2328057217831,5.42301971544263,2.83952539545773,9.06159119231679,0,0,0,0,0,0,0,0,0,11.5895293792995,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0.978323094660449,0,0,1.20990716048664,2.75465485467441,0,0,0,0.664653872707185,0,0.313932918407225,1.19472429772959,0.284609546029793,0,4.5125531967134,0.783939179315021,5.48473001456536,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.379864775735272,0.195551382734803,0.721429382263803,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,1.59743200399193,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.242998226632099,1.67717343799633,0.0788057072991982,0,0,0,2.30298236783334,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.110929051536852,0.496771223531068,0,0.124980407962107,0,0,0,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41351316756705,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0,0,0,3.80361822045529,0,0,0,0,0,2.65771064666944,1.24415452006595,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,1.76450187355203,0.414943514785307,0.161475645631851,0,1.57036349601641,0.707818340086442,1.65085738669511,0.231051332300676,0,0,0,0,0,0,2.09525355585138,0,0,0.337687923091973,0,0.206686796501184,0.19024743058172,1.09394961803644,0,0,0,1.14986184875636,0,0,0,0,2.39496399439125,0,0,0.339848664884159,0.263091094251396,0,1.66847102838104,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97838929107265,3.72247662797184,11.4664672677292,22.7066526549518,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0.981542335574726,0.297046400327086,1.2679671827502,0,0.469919589899268,0.515663103788617,0,0.71421575442263,4.2347384605883,0,0,0,0.286679166302903,0,0.271965960763659,2.18175345170189,0,0,0,0,0,0,0,0.61193297845189,0.534434810531121,0.275684698604535,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0.342233301085281,0.202056159043763,0.0717222053926763,0.332660356546013,13.5943458580327,0,0,0,0,0.122241444182866,1.62758471326295,0,0,0 | |||
|short_description=p3@WNT7A | |||
}} |
Revision as of 21:47, 12 September 2013
Short description: | p3@WNT7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_WNT7A_5end |
Coexpression cluster: | C1269_serous_Urothelial_clear_Gingival_Renal_choriocarcinoma_Corneal |
Association with transcript: | 26bp_to_ENST00000285018, NM_004625, uc003bye.1_5end |
EntrezGene: | WNT7A |
HGNC: | 12786 |
UniProt: | O00755 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 6.16e-12 | 5 |
nephron tubule epithelium | 1.12e-11 | 10 |
transitional epithelium | 7.82e-10 | 6 |
urinary system structure | 2.44e-08 | 47 |
renal system | 4.48e-08 | 48 |
gingival epithelium | 1.20e-07 | 3 |
extraembryonic membrane | 2.04e-07 | 14 |
membranous layer | 2.04e-07 | 14 |
nephron epithelium | 2.95e-07 | 15 |
renal tubule | 2.95e-07 | 15 |
nephron tubule | 2.95e-07 | 15 |
nephron | 2.95e-07 | 15 |
uriniferous tubule | 2.95e-07 | 15 |
nephrogenic mesenchyme | 2.95e-07 | 15 |
lower respiratory tract epithelium | 3.39e-07 | 3 |
epithelium of bronchus | 3.39e-07 | 3 |
egg chorion | 6.22e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.