FFCP PHASE1:Hg19::chr3:20947006..20947022,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:20947006..20947022,+|id=chr3:20947006..20947022,+|ontology_enrichment_celltype=CL:0000077!1.47e-12!19;CL:0002150!2.64e-10!3;CL:0000861!2.64e-10!3;CL:0002097!3.39e-08!2|ontology_enrichment_celltype_v019=CL:0002097;7.75e-20;2!CL:0000174;1.50e-13;3!CL:0000077;3.02e-12;19!CL:0002568;2.50e-10;1|ontology_enrichment_celltype_v019_2=CL:0002097,7.08e-20,2;CL:0000174,1.41e-13,3;CL:0000077,3.10e-12,19;CL:0002568,4.75e-10,1|ontology_enrichment_development_v019=UBERON:0008947;7.80e-24;29!UBERON:0003124;1.03e-10;1|ontology_enrichment_disease=DOID:14566!4.02e-16!239;DOID:162!1.12e-14!235;DOID:305!1.25e-12!106;DOID:0050687!1.28e-11!143|ontology_enrichment_disease_v019=DOID:170;3.33e-07;6|ontology_enrichment_disease_v019_2=DOID:305,2.52e-10,106;DOID:0050687,4.13e-10,143;DOID:162,1.39e-09,235;DOID:14566,2.54e-09,239;DOID:170,3.24e-07,6|ontology_enrichment_uberon=UBERON:0001737!4.86e-29!9;UBERON:0001557!9.02e-13!19;UBERON:0002394!9.86e-08!4;UBERON:0003928!9.86e-08!4;UBERON:0002294!1.28e-07!7;UBERON:0001173!1.28e-07!7;UBERON:0004912!1.28e-07!7;UBERON:0008947!6.85e-07!38;UBERON:0003258!6.85e-07!38|ontology_enrichment_uberon_v019=UBERON:0001737;2.35e-62;9!UBERON:0001557;2.35e-62;9!UBERON:0000072;5.43e-17;37!UBERON:0002369;1.50e-13;3!UBERON:0001235;1.50e-13;3!UBERON:0006858;1.50e-13;3!UBERON:0000065;5.19e-13;44!UBERON:0001004;9.03e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.25e-62,9;UBERON:0001557,6.49e-29,19;UBERON:0008947,8.72e-18,38;UBERON:0003258,8.72e-18,38;UBERON:0000072,3.78e-14,47;UBERON:0002369,1.41e-13,3;UBERON:0001235,1.41e-13,3;UBERON:0006858,1.41e-13,3;UBERON:0000065,3.72e-12,54;UBERON:0001004,1.55e-08,74;UBERON:0001041,4.49e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41968160047813,0.842923450390509,1.68707720918437,1.10293972732394,1.08939722046203,1.18635309555548,1.07865046528132,1.37355025587742,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0,0,1.11362469558097,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808815160325942,0.716084698702437,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0.498635045700469,0.451191321234361,0.392125068635479,0.335643173951685,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580537987734511,0.877071805034227,0.656923656425674,0,0,0,0,0,0,0,1.76349404553374,0,0,0,0,0,0,0,0,0.271808412147228,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.39557285273876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.64399969987393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,3.65977677773876,8.57766365499703,0,0,0,0,0,0.308801447160972,5.92066933862509,0.353378291891762,3.08662461233464,0.675769762612291,0,3.10887307558079,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,1.84105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,3.54809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709992004383392,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p@chr3:20947006..20947022,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:20947006..20947022,+ | |||
|id=chr3:20947006..20947022,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.47e-12!19;CL:0002150!2.64e-10!3;CL:0000861!2.64e-10!3;CL:0002097!3.39e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002097;7.75e-20;2!CL:0000174;1.50e-13;3!CL:0000077;3.02e-12;19!CL:0002568;2.50e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,7.08e-20,2;CL:0000174,1.41e-13,3;CL:0000077,3.10e-12,19;CL:0002568,4.75e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.80e-24;29!UBERON:0003124;1.03e-10;1 | |||
|ontology_enrichment_disease=DOID:14566!4.02e-16!239;DOID:162!1.12e-14!235;DOID:305!1.25e-12!106;DOID:0050687!1.28e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:170;3.33e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.52e-10,106;DOID:0050687,4.13e-10,143;DOID:162,1.39e-09,235;DOID:14566,2.54e-09,239;DOID:170,3.24e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.86e-29!9;UBERON:0001557!9.02e-13!19;UBERON:0002394!9.86e-08!4;UBERON:0003928!9.86e-08!4;UBERON:0002294!1.28e-07!7;UBERON:0001173!1.28e-07!7;UBERON:0004912!1.28e-07!7;UBERON:0008947!6.85e-07!38;UBERON:0003258!6.85e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.35e-62;9!UBERON:0001557;2.35e-62;9!UBERON:0000072;5.43e-17;37!UBERON:0002369;1.50e-13;3!UBERON:0001235;1.50e-13;3!UBERON:0006858;1.50e-13;3!UBERON:0000065;5.19e-13;44!UBERON:0001004;9.03e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.25e-62,9;UBERON:0001557,6.49e-29,19;UBERON:0008947,8.72e-18,38;UBERON:0003258,8.72e-18,38;UBERON:0000072,3.78e-14,47;UBERON:0002369,1.41e-13,3;UBERON:0001235,1.41e-13,3;UBERON:0006858,1.41e-13,3;UBERON:0000065,3.72e-12,54;UBERON:0001004,1.55e-08,74;UBERON:0001041,4.49e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41968160047813,0.842923450390509,1.68707720918437,1.10293972732394,1.08939722046203,1.18635309555548,1.07865046528132,1.37355025587742,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0,0,1.11362469558097,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808815160325942,0.716084698702437,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0.498635045700469,0.451191321234361,0.392125068635479,0.335643173951685,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580537987734511,0.877071805034227,0.656923656425674,0,0,0,0,0,0,0,1.76349404553374,0,0,0,0,0,0,0,0,0.271808412147228,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.39557285273876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.64399969987393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,3.65977677773876,8.57766365499703,0,0,0,0,0,0.308801447160972,5.92066933862509,0.353378291891762,3.08662461233464,0.675769762612291,0,3.10887307558079,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,1.84105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,3.54809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709992004383392,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:20947006..20947022,+ | |||
}} |
Revision as of 23:39, 12 September 2013
Short description: | p@chr3:20947006..20947022, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:20947006..20947022, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 7.08e-20 | 2 |
steroid hormone secreting cell | 1.41e-13 | 3 |
mesothelial cell | 3.10e-12 | 19 |
mesenchymal stem cell of Wharton's jelly | 4.75e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.25e-62 | 9 |
upper respiratory tract | 6.49e-29 | 19 |
respiratory primordium | 8.72e-18 | 38 |
endoderm of foregut | 8.72e-18 | 38 |
segment of respiratory tract | 3.78e-14 | 47 |
adrenal gland | 1.41e-13 | 3 |
adrenal cortex | 1.41e-13 | 3 |
adrenal/interrenal gland | 1.41e-13 | 3 |
respiratory tract | 3.72e-12 | 54 |
respiratory system | 1.55e-08 | 74 |
foregut | 4.49e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.52e-10 | 106 |
cell type cancer | 4.13e-10 | 143 |
cancer | 1.39e-09 | 235 |
disease of cellular proliferation | 2.54e-09 | 239 |
endocrine gland cancer | 3.24e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.