FFCP PHASE1:Hg19::chr3:130267501..130267516,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C253|description=CAGE_peak_at_chr3:130267501..130267516,+|id=chr3:130267501..130267516,+|ontology_enrichment_celltype=CL:0002568!6.06e-13!1;CL:0000039!1.43e-07!7;CL:0000586!1.43e-07!7;CL:1000415!3.09e-07!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004872;1.49e-38;7!UBERON:0005795;6.56e-08;10|ontology_enrichment_disease=DOID:3095!1.15e-08!22;DOID:2994!1.15e-08!22;DOID:169!1.26e-08!6|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!3.85e-17!3;UBERON:0004854!3.85e-17!3;UBERON:0009034!3.85e-17!3;UBERON:0002095!3.85e-17!3;UBERON:0004782!3.85e-17!3;UBERON:0003281!3.85e-17!3;UBERON:0009664!3.85e-17!3;UBERON:0002296!3.85e-17!3;UBERON:0005602!3.85e-17!3;UBERON:0001179!3.85e-17!3;UBERON:0006293!3.85e-17!3;UBERON:0006834!2.06e-13!1;UBERON:0001301!4.23e-13!1;UBERON:0000013!3.59e-10!5;UBERON:0002410!3.59e-10!5;UBERON:0005795!8.48e-09!22;UBERON:0004177!7.30e-08!7;UBERON:0004175!9.85e-08!25;UBERON:0000341!2.91e-07!2;UBERON:0000945!5.54e-07!8;UBERON:0010039!5.54e-07!8|ontology_enrichment_uberon_v019=UBERON:0002106;6.24e-88;3!UBERON:0006834;4.66e-66;1!UBERON:0004177;2.19e-53;5!UBERON:0005057;2.19e-53;5!UBERON:0002075;8.40e-16;18!UBERON:0000077;6.25e-11;27!UBERON:0002405;6.25e-11;27!UBERON:0002390;2.68e-09;32!UBERON:0004458;7.66e-07;48|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.24e-88,3;UBERON:0004854,6.24e-88,3;UBERON:0009034,6.24e-88,3;UBERON:0002095,6.24e-88,3;UBERON:0004782,6.24e-88,3;UBERON:0003281,6.24e-88,3;UBERON:0009664,6.24e-88,3;UBERON:0002296,6.24e-88,3;UBERON:0005602,6.24e-88,3;UBERON:0001179,6.24e-88,3;UBERON:0006293,6.24e-88,3;UBERON:0006834,4.66e-66,1;UBERON:0004177,1.49e-38,7;UBERON:0005057,1.49e-38,7;UBERON:0000945,6.50e-34,8;UBERON:0010039,6.50e-34,8;UBERON:0004457,4.59e-23,12;UBERON:0000042,4.59e-23,12;UBERON:0003887,4.59e-23,12;UBERON:0002075,8.40e-16,18;UBERON:0005409,2.63e-11,25;UBERON:0000077,2.96e-10,29;UBERON:0002323,7.30e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72553362141575,4.96325737396544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.833621662743,0.406896178315738,0,0,0|short_description=p@chr3:130267501..130267516,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C253 | |||
|description=CAGE_peak_at_chr3:130267501..130267516,+ | |||
|id=chr3:130267501..130267516,+ | |||
|ontology_enrichment_celltype=CL:0002568!6.06e-13!1;CL:0000039!1.43e-07!7;CL:0000586!1.43e-07!7;CL:1000415!3.09e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.49e-38;7!UBERON:0005795;6.56e-08;10 | |||
|ontology_enrichment_disease=DOID:3095!1.15e-08!22;DOID:2994!1.15e-08!22;DOID:169!1.26e-08!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!3.85e-17!3;UBERON:0004854!3.85e-17!3;UBERON:0009034!3.85e-17!3;UBERON:0002095!3.85e-17!3;UBERON:0004782!3.85e-17!3;UBERON:0003281!3.85e-17!3;UBERON:0009664!3.85e-17!3;UBERON:0002296!3.85e-17!3;UBERON:0005602!3.85e-17!3;UBERON:0001179!3.85e-17!3;UBERON:0006293!3.85e-17!3;UBERON:0006834!2.06e-13!1;UBERON:0001301!4.23e-13!1;UBERON:0000013!3.59e-10!5;UBERON:0002410!3.59e-10!5;UBERON:0005795!8.48e-09!22;UBERON:0004177!7.30e-08!7;UBERON:0004175!9.85e-08!25;UBERON:0000341!2.91e-07!2;UBERON:0000945!5.54e-07!8;UBERON:0010039!5.54e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;6.24e-88;3!UBERON:0006834;4.66e-66;1!UBERON:0004177;2.19e-53;5!UBERON:0005057;2.19e-53;5!UBERON:0002075;8.40e-16;18!UBERON:0000077;6.25e-11;27!UBERON:0002405;6.25e-11;27!UBERON:0002390;2.68e-09;32!UBERON:0004458;7.66e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.24e-88,3;UBERON:0004854,6.24e-88,3;UBERON:0009034,6.24e-88,3;UBERON:0002095,6.24e-88,3;UBERON:0004782,6.24e-88,3;UBERON:0003281,6.24e-88,3;UBERON:0009664,6.24e-88,3;UBERON:0002296,6.24e-88,3;UBERON:0005602,6.24e-88,3;UBERON:0001179,6.24e-88,3;UBERON:0006293,6.24e-88,3;UBERON:0006834,4.66e-66,1;UBERON:0004177,1.49e-38,7;UBERON:0005057,1.49e-38,7;UBERON:0000945,6.50e-34,8;UBERON:0010039,6.50e-34,8;UBERON:0004457,4.59e-23,12;UBERON:0000042,4.59e-23,12;UBERON:0003887,4.59e-23,12;UBERON:0002075,8.40e-16,18;UBERON:0005409,2.63e-11,25;UBERON:0000077,2.96e-10,29;UBERON:0002323,7.30e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72553362141575,4.96325737396544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.833621662743,0.406896178315738,0,0,0 | |||
|short_description=p@chr3:130267501..130267516,+ | |||
}} |
Revision as of 21:31, 12 September 2013
Short description: | p@chr3:130267501..130267516, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:130267501..130267516, + |
Coexpression cluster: | C253_spleen_rhabdomyosarcoma_Hepatocyte_small_uterus_liver_rectum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 6.24e-88 | 3 |
gastrointestinal system mesentery | 6.24e-88 | 3 |
stomach region | 6.24e-88 | 3 |
mesentery | 6.24e-88 | 3 |
gastrointestinal system serosa | 6.24e-88 | 3 |
mesentery of stomach | 6.24e-88 | 3 |
gut mesentery | 6.24e-88 | 3 |
dorsal mesentery | 6.24e-88 | 3 |
dorsal mesogastrium | 6.24e-88 | 3 |
peritoneal cavity | 6.24e-88 | 3 |
spleen primordium | 6.24e-88 | 3 |
uterus or analog | 4.66e-66 | 1 |
hemopoietic organ | 1.49e-38 | 7 |
immune organ | 1.49e-38 | 7 |
stomach | 6.50e-34 | 8 |
food storage organ | 6.50e-34 | 8 |
cavity lining | 4.59e-23 | 12 |
serous membrane | 4.59e-23 | 12 |
intraembryonic coelom | 4.59e-23 | 12 |
viscus | 8.40e-16 | 18 |
gastrointestinal system | 2.63e-11 | 25 |
mixed endoderm/mesoderm-derived structure | 2.96e-10 | 29 |
body cavity | 7.30e-07 | 46 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.