FFCP PHASE1:Hg19::chr3:168808463..168808491,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C479|description=CAGE_peak_at_chr3:168808463..168808491,-|id=chr3:168808463..168808491,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002617;1.07e-17;2!CL:0002615;2.19e-12;3!CL:0002579;2.19e-12;3!CL:0000322;2.89e-12;3!CL:0000346;2.89e-12;3!CL:1000428;2.89e-12;3!CL:0000136;3.65e-11;13!CL:0002559;7.01e-08;5|ontology_enrichment_celltype_v019_2=CL:0002617,1.27e-17,2;CL:0002579,2.07e-12,3;CL:0002615,2.31e-12,3;CL:0000346,2.59e-12,3;CL:1000428,2.59e-12,3;CL:0000322,2.89e-12,3;CL:0000136,8.85e-10,15;CL:0002559,6.55e-08,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:120!2.81e-07!27;DOID:17!5.90e-07!5;DOID:450!5.90e-07!5;DOID:66!5.90e-07!5;DOID:423!5.90e-07!5;DOID:0080000!5.90e-07!5;DOID:11722!5.90e-07!5|ontology_enrichment_disease_v019=DOID:5662;1.84e-34;1!DOID:3910;1.07e-17;2!DOID:3908;7.01e-08;5|ontology_enrichment_disease_v019_2=DOID:5662,1.84e-34,1;DOID:3910,1.07e-17,2;DOID:3908,7.01e-08,5|ontology_enrichment_uberon=UBERON:0003688!1.58e-10!6;UBERON:0002358!1.58e-10!6;UBERON:0003684!1.58e-10!6;UBERON:0001178!1.58e-10!6;UBERON:0003100!6.80e-07!41|ontology_enrichment_uberon_v019=UBERON:0003688;4.86e-23;6!UBERON:0002358;4.86e-23;6!UBERON:0003684;4.86e-23;6!UBERON:0001178;4.86e-23;6!UBERON:0004903;1.07e-17;2!UBERON:0002173;1.07e-17;2!UBERON:0002186;1.07e-17;2!UBERON:0004457;9.73e-16;9!UBERON:0000042;9.73e-16;9!UBERON:0004821;2.89e-12;3!UBERON:0007499;2.89e-12;3!UBERON:0003215;2.89e-12;3!UBERON:0010368;2.89e-12;3!UBERON:0009911;2.89e-12;3!UBERON:0002299;2.89e-12;3!UBERON:0000412;2.89e-12;3!UBERON:0001992;2.89e-12;3!UBERON:0006524;2.89e-12;3!UBERON:0008874;2.89e-12;3!UBERON:0002169;2.89e-12;3!UBERON:0004894;2.89e-12;3!UBERON:0009856;1.57e-09;4!UBERON:0002073;7.01e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.86e-23,6;UBERON:0002358,4.86e-23,6;UBERON:0003684,4.86e-23,6;UBERON:0001178,4.86e-23,6;UBERON:0004903,1.07e-17,2;UBERON:0002173,1.07e-17,2;UBERON:0002186,1.07e-17,2;UBERON:0000412,2.59e-12,3;UBERON:0001992,2.59e-12,3;UBERON:0004821,2.89e-12,3;UBERON:0003215,2.89e-12,3;UBERON:0010368,2.89e-12,3;UBERON:0009911,2.89e-12,3;UBERON:0002299,2.89e-12,3;UBERON:0006524,2.89e-12,3;UBERON:0008874,2.89e-12,3;UBERON:0002169,2.89e-12,3;UBERON:0004894,2.89e-12,3;UBERON:0004457,4.54e-12,12;UBERON:0000042,4.54e-12,12;UBERON:0002073,6.55e-08,5;UBERON:0005086,6.55e-08,5;UBERON:0009569,8.20e-08,112|phase1_expression=0,1.07050261945492,0.422863212287913,2.00146596706261,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,2.04682899626681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5255219017566,0.236387681767936,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0.322231671127465,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C479 | |||
|description=CAGE_peak_at_chr3:168808463..168808491,- | |||
|id=chr3:168808463..168808491,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002617;1.07e-17;2!CL:0002615;2.19e-12;3!CL:0002579;2.19e-12;3!CL:0000322;2.89e-12;3!CL:0000346;2.89e-12;3!CL:1000428;2.89e-12;3!CL:0000136;3.65e-11;13!CL:0002559;7.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,1.27e-17,2;CL:0002579,2.07e-12,3;CL:0002615,2.31e-12,3;CL:0000346,2.59e-12,3;CL:1000428,2.59e-12,3;CL:0000322,2.89e-12,3;CL:0000136,8.85e-10,15;CL:0002559,6.55e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!2.81e-07!27;DOID:17!5.90e-07!5;DOID:450!5.90e-07!5;DOID:66!5.90e-07!5;DOID:423!5.90e-07!5;DOID:0080000!5.90e-07!5;DOID:11722!5.90e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:5662;1.84e-34;1!DOID:3910;1.07e-17;2!DOID:3908;7.01e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.84e-34,1;DOID:3910,1.07e-17,2;DOID:3908,7.01e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.58e-10!6;UBERON:0002358!1.58e-10!6;UBERON:0003684!1.58e-10!6;UBERON:0001178!1.58e-10!6;UBERON:0003100!6.80e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.86e-23;6!UBERON:0002358;4.86e-23;6!UBERON:0003684;4.86e-23;6!UBERON:0001178;4.86e-23;6!UBERON:0004903;1.07e-17;2!UBERON:0002173;1.07e-17;2!UBERON:0002186;1.07e-17;2!UBERON:0004457;9.73e-16;9!UBERON:0000042;9.73e-16;9!UBERON:0004821;2.89e-12;3!UBERON:0007499;2.89e-12;3!UBERON:0003215;2.89e-12;3!UBERON:0010368;2.89e-12;3!UBERON:0009911;2.89e-12;3!UBERON:0002299;2.89e-12;3!UBERON:0000412;2.89e-12;3!UBERON:0001992;2.89e-12;3!UBERON:0006524;2.89e-12;3!UBERON:0008874;2.89e-12;3!UBERON:0002169;2.89e-12;3!UBERON:0004894;2.89e-12;3!UBERON:0009856;1.57e-09;4!UBERON:0002073;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.86e-23,6;UBERON:0002358,4.86e-23,6;UBERON:0003684,4.86e-23,6;UBERON:0001178,4.86e-23,6;UBERON:0004903,1.07e-17,2;UBERON:0002173,1.07e-17,2;UBERON:0002186,1.07e-17,2;UBERON:0000412,2.59e-12,3;UBERON:0001992,2.59e-12,3;UBERON:0004821,2.89e-12,3;UBERON:0003215,2.89e-12,3;UBERON:0010368,2.89e-12,3;UBERON:0009911,2.89e-12,3;UBERON:0002299,2.89e-12,3;UBERON:0006524,2.89e-12,3;UBERON:0008874,2.89e-12,3;UBERON:0002169,2.89e-12,3;UBERON:0004894,2.89e-12,3;UBERON:0004457,4.54e-12,12;UBERON:0000042,4.54e-12,12;UBERON:0002073,6.55e-08,5;UBERON:0005086,6.55e-08,5;UBERON:0009569,8.20e-08,112 | |||
|phase1_expression=0,1.07050261945492,0.422863212287913,2.00146596706261,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,2.04682899626681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5255219017566,0.236387681767936,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0.322231671127465,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,8.91737649074576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:168808463..168808491,- | |||
}} |
Revision as of 22:36, 12 September 2013
Short description: | p@chr3:168808463..168808491, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:168808463..168808491, - |
Coexpression cluster: | C479_pleomorphic_mesothelioma_cholangiocellular_melanoma_Saos2_serous_glioblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 1.27e-17 | 2 |
omentum preadipocyte | 2.07e-12 | 3 |
adipocyte of omentum tissue | 2.31e-12 | 3 |
hair follicle dermal papilla cell | 2.59e-12 | 3 |
stem cell of epidermis | 2.59e-12 | 3 |
pneumocyte | 2.89e-12 | 3 |
fat cell | 8.85e-10 | 15 |
hair follicle cell | 6.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.86e-23 | 6 |
peritoneum | 4.86e-23 | 6 |
abdominal cavity | 4.86e-23 | 6 |
visceral peritoneum | 4.86e-23 | 6 |
bronchoalveolar duct junction | 1.07e-17 | 2 |
alveolar duct | 1.07e-17 | 2 |
bronchiole | 1.07e-17 | 2 |
dermal papilla | 2.59e-12 | 3 |
papillary layer of dermis | 2.59e-12 | 3 |
pulmonary alveolus epithelium | 2.89e-12 | 3 |
alveolus | 2.89e-12 | 3 |
pulmonary lobule | 2.89e-12 | 3 |
lobule | 2.89e-12 | 3 |
alveolus of lung | 2.89e-12 | 3 |
alveolar system | 2.89e-12 | 3 |
pulmonary acinus | 2.89e-12 | 3 |
alveolar sac | 2.89e-12 | 3 |
alveolar wall | 2.89e-12 | 3 |
cavity lining | 4.54e-12 | 12 |
serous membrane | 4.54e-12 | 12 |
hair follicle | 6.55e-08 | 5 |
hair follicle placode | 6.55e-08 | 5 |
subdivision of trunk | 8.20e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.84e-34 | 1 |
lung adenocarcinoma | 1.07e-17 | 2 |
non-small cell lung carcinoma | 7.01e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.