FFCP PHASE1:Hg19::chr5:58335352..58335370,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5144|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8783|TSSclassifier=S|UniProt=|association_with_transcript=-10bp_to_ENST00000515011,uc003jru.2_5end|description=CAGE_peak_11_at_PDE4D_5end|id=chr5:58335352..58335370,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000084;1.82e-08;25!CL:0000624;8.09e-08;6|ontology_enrichment_celltype_v019_2=CL:0000084,9.89e-09,25;CL:0000827,9.89e-09,25;CL:0000624,7.79e-08,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,5.74608382039645,0.491467873003018,0.697801167972428,0.873765488520689,0,2.84662611808107,0.662794751455832,0.672325146451775,0,0,0,0,0,0,0,0.410623275218653,0.125542639594803,0,0,0,1.57345710739562,4.22212337906934,6.19264493264304,0,0,0,0,0,0.880801318004542,5.53995408531877,3.20871115952227,3.25516306073778,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0.863077176966451,0,0.47296445977717,3.44745680736619,1.29096936716765,0,3.20011977222428,0,0.674170453335254,4.89734227793444,3.85114832491312,1.91801137739712,0.329851300186716,0.398927315243264,1.27867425159808,0.870627715885752,0,0.622822248995575,1.25624332628372,0.521482918420201,0.868755378820466,0.605399502633369,0.368277635987565,0,0.845021145247767,0,0.628975936525128,2.80821577866238,0.600707571366025,0.48217676009124,0.855038231223746,0.19891667719909,0,0,1.09227722252426,0,0,0,0,0,0,0,0,0,5.28685314316103,0,0,7.86839080455332,7.46720449223413,13.3640974349681,0.334372990781356,2.60737813306872,1.89379122293893,0,3.89936599098108,2.3568472597987,1.32920336750173,0.541607727530031,1.79327847615945,2.08094956095805,4.93313713811028,3.03985019564433,2.02862160014537,1.77943875794473,1.07016331235885,1.04535523804977,1.35971211237079,5.3650869104269,4.12352934579156,1.01207876807801,0.95569624297229,0,1.90090408889675,0,0,0,0.710331756132051,0,9.67712367478716,4.01160293675261,5.93780055919476,0,1.34140171940727,0.767175371061182,0,0.50133791063589,3.33146993609895,0,0,0.189069634328136,0.221729397462564,0.351339142772504,0.458426764241994,0,0,0,0,0,2.8618874916641,1.71598473234038,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,3.9534125230819,3.87780264148325,0,0,0.12663051166458,0,0,0,0.560677600142307,1.06748995729705,0.49333509683432,0.311211035399766,0.134710672069688,0,0.605429710579726,0,3.28050004567315,0,0.570471821544449,0,0.822041490506354,0,0,2.85815839756851,0.491337269247072,6.40619843289746,15.4440371446667,7.66527480763526,0,0.718618141816238,0.336672227908132,1.12606667884768,1.38532057742091,3.07284334616587,1.5324389789951,10.9673783001816,0.113432183160021,0,0.85422955527427,0.423863802319124,0,0,0,0,0,0.0974370051611986,0,0.368199594569197,0,0,0,0.339121184620975,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,3.25057549622385,0,0.236613600079688,0.337169380156203,0,0.55146986366197,0.435758888184812,0,0,0.588664395376038,0,0,0,0,0,0,0.982827216677626,0,1.7658523976586,0.737930631258681,1.88724591328378,0,0,0,0,1.3032332212413,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.51336800074665,0.258543431515556,7.15312891703765,0,0,0,0.771622122786426,1.41849132023278,0.266422179016099,6.14805372730035,7.5967024754802,2.46972101034231,0.325736184293735,6.39705507736582,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.579125226670317,0.821905290201534,0.895304816199478,4.14715032776051,6.10795356625974,3.66566877261179,4.74869234235069,0,0,0,0.335032530668698,0,0,8.97484377612075,0.828831026872071,5.76650011079957,1.50051156317903,0.813795071099207,0.207970861530807,0,0.315404830067869,0,0.300946099727719,2.27407504055985,2.0694614258501,1.32845119707087,1.29058417979192,0.0868836144680828,0.195801157462741,0,5.78950473144085,5.39285502046542,5.65656056358255,0.606255142892519,0,1.20956117331872,0,0.153461973288062,0,0.384417447767103,0,0,0,0,0,0,0,0,2.1754700926492,0,0.0920809889358963,1.95184561879831,0.182091168006717,0.524497659837696,0.902399225814824,0.924184045252977,0,0,3.58875538235777,0,0,0.431831832204279,0,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,1.30151357865721,1.23649213977267,0.640986253728404,0.495056999523528,0,0,0,1.64340221096607,0.462145851343933,0.307007349452259,0.137836572484531,5.47843248828196,4.64053420525531,0.767039646744908,1.15741646340759,0,0,0,0,0,0.31481234683064,1.3940745403212,0.616067160352178,0,0,0.37064843820784,0,6.32669227911434,1.2655176988749,1.90630193923825,0.2558977913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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_ENST00000515011,uc003jru.2_5end | |||
|description=CAGE_peak_11_at_PDE4D_5end | |||
|id=chr5:58335352..58335370,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.82e-08;25!CL:0000624;8.09e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,9.89e-09,25;CL:0000827,9.89e-09,25;CL:0000624,7.79e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p11@PDE4D | |||
}} |
Revision as of 16:00, 13 September 2013
Short description: | p11@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_PDE4D_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000515011, uc003jru.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 9.89e-09 | 25 |
pro-T cell | 9.89e-09 | 25 |
CD4-positive, alpha-beta T cell | 7.79e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.