FFCP PHASE1:Hg19::chr6:43858741..43858765,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100132354|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_NR_024478,uc011dvm.1_5end|coexpression_cluster_id=C101|description=CAGE_peak_2_at_LOC100132354_5end|id=chr6:43858741..43858765,+|ontology_enrichment_celltype=CL:0000242!4.25e-09!2;CL:0002322!3.19e-07!5|ontology_enrichment_celltype_v019=CL:0002535;6.93e-09;2|ontology_enrichment_celltype_v019_2=CL:0002535,6.42e-09,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;5.53e-17;1!DOID:1357;5.53e-17;1!DOID:5409;3.07e-16;4!DOID:1325;1.09e-09;7!DOID:3904;1.09e-09;7!DOID:0050615;2.83e-09;16!DOID:3493;6.93e-09;2!DOID:3905;9.84e-08;9|ontology_enrichment_disease_v019_2=DOID:0050619,5.53e-17,1;DOID:1357,5.53e-17,1;DOID:5409,2.64e-16,4;DOID:1325,9.95e-10,7;DOID:3904,9.95e-10,7;DOID:0050615,2.68e-09,16;DOID:3493,8.09e-09,2;DOID:3905,9.20e-08,9|ontology_enrichment_uberon=UBERON:0002619!9.13e-30!22;UBERON:0001950!3.45e-28!20;UBERON:0001869!4.00e-26!32;UBERON:0000956!5.90e-26!25;UBERON:0000203!5.90e-26!25;UBERON:0002791!3.04e-25!33;UBERON:0002020!2.06e-24!34;UBERON:0003528!2.06e-24!34;UBERON:0001893!2.06e-24!34;UBERON:0002780!1.04e-19!41;UBERON:0001890!1.04e-19!41;UBERON:0006240!1.04e-19!41;UBERON:0003080!3.66e-19!42;UBERON:0001049!4.00e-17!57;UBERON:0005068!4.00e-17!57;UBERON:0006241!4.00e-17!57;UBERON:0007135!4.00e-17!57;UBERON:0000073!5.27e-17!94;UBERON:0001016!5.27e-17!94;UBERON:0001017!6.82e-17!82;UBERON:0000955!7.42e-17!69;UBERON:0006238!7.42e-17!69;UBERON:0005743!6.96e-16!86;UBERON:0002616!2.00e-14!59;UBERON:0003056!7.32e-14!61;UBERON:0000349!1.66e-12!5;UBERON:0001872!1.88e-12!5;UBERON:0001871!2.89e-12!7;UBERON:0003075!2.45e-11!86;UBERON:0007284!2.45e-11!86;UBERON:0002346!1.19e-10!90;UBERON:0004121!6.07e-09!169;UBERON:0001876!8.35e-09!2;UBERON:0000033!1.23e-08!123;UBERON:0000924!1.31e-08!173;UBERON:0006601!1.31e-08!173;UBERON:0000153!4.99e-08!129;UBERON:0007811!4.99e-08!129;UBERON:0002420!5.02e-07!9;UBERON:0007245!5.02e-07!9;UBERON:0010009!5.02e-07!9;UBERON:0010011!5.02e-07!9;UBERON:0000454!5.02e-07!9|ontology_enrichment_uberon_v019=UBERON:0001764;5.53e-17;1!UBERON:0001825;5.53e-17;1!UBERON:0006955;6.93e-09;2!UBERON:0004801;6.93e-09;2!UBERON:0001950;3.65e-07;20!UBERON:0000922;8.79e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0001764,5.53e-17,1;UBERON:0001825,5.53e-17,1;UBERON:0006955,6.42e-09,2;UBERON:0004801,6.42e-09,2;UBERON:0001950,3.89e-07,20|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13826949357463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0.969332746095218,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65983798109815,0,0,0.0674035438541849,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.75332613876007,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0.468334905806882,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,1.00828678488687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07965256976767,0,0,0,0,0,0.233939463462106,36.6069426296918,0,1.58124514854544,0,2.41540549706678,0,0,0.940634592723046,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.339957450954573,1.30905207102113,0,0,0,0,0,0,0.2533970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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100132354 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_024478,uc011dvm.1_5end | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_2_at_LOC100132354_5end | |||
|id=chr6:43858741..43858765,+ | |||
|ontology_enrichment_celltype=CL:0000242!4.25e-09!2;CL:0002322!3.19e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002535;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,6.42e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;5.53e-17;1!DOID:1357;5.53e-17;1!DOID:5409;3.07e-16;4!DOID:1325;1.09e-09;7!DOID:3904;1.09e-09;7!DOID:0050615;2.83e-09;16!DOID:3493;6.93e-09;2!DOID:3905;9.84e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,5.53e-17,1;DOID:1357,5.53e-17,1;DOID:5409,2.64e-16,4;DOID:1325,9.95e-10,7;DOID:3904,9.95e-10,7;DOID:0050615,2.68e-09,16;DOID:3493,8.09e-09,2;DOID:3905,9.20e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0002619!9.13e-30!22;UBERON:0001950!3.45e-28!20;UBERON:0001869!4.00e-26!32;UBERON:0000956!5.90e-26!25;UBERON:0000203!5.90e-26!25;UBERON:0002791!3.04e-25!33;UBERON:0002020!2.06e-24!34;UBERON:0003528!2.06e-24!34;UBERON:0001893!2.06e-24!34;UBERON:0002780!1.04e-19!41;UBERON:0001890!1.04e-19!41;UBERON:0006240!1.04e-19!41;UBERON:0003080!3.66e-19!42;UBERON:0001049!4.00e-17!57;UBERON:0005068!4.00e-17!57;UBERON:0006241!4.00e-17!57;UBERON:0007135!4.00e-17!57;UBERON:0000073!5.27e-17!94;UBERON:0001016!5.27e-17!94;UBERON:0001017!6.82e-17!82;UBERON:0000955!7.42e-17!69;UBERON:0006238!7.42e-17!69;UBERON:0005743!6.96e-16!86;UBERON:0002616!2.00e-14!59;UBERON:0003056!7.32e-14!61;UBERON:0000349!1.66e-12!5;UBERON:0001872!1.88e-12!5;UBERON:0001871!2.89e-12!7;UBERON:0003075!2.45e-11!86;UBERON:0007284!2.45e-11!86;UBERON:0002346!1.19e-10!90;UBERON:0004121!6.07e-09!169;UBERON:0001876!8.35e-09!2;UBERON:0000033!1.23e-08!123;UBERON:0000924!1.31e-08!173;UBERON:0006601!1.31e-08!173;UBERON:0000153!4.99e-08!129;UBERON:0007811!4.99e-08!129;UBERON:0002420!5.02e-07!9;UBERON:0007245!5.02e-07!9;UBERON:0010009!5.02e-07!9;UBERON:0010011!5.02e-07!9;UBERON:0000454!5.02e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;5.53e-17;1!UBERON:0001825;5.53e-17;1!UBERON:0006955;6.93e-09;2!UBERON:0004801;6.93e-09;2!UBERON:0001950;3.65e-07;20!UBERON:0000922;8.79e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,5.53e-17,1;UBERON:0001825,5.53e-17,1;UBERON:0006955,6.42e-09,2;UBERON:0004801,6.42e-09,2;UBERON:0001950,3.89e-07,20 | |||
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|short_description=p2@LOC100132354 | |||
}} |
Revision as of 21:08, 13 September 2013
Short description: | p2@LOC100132354 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC100132354_5end |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | 0bp_to_NR_024478, uc011dvm.1_5end |
EntrezGene: | LOC100132354 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 5.53e-17 | 1 |
paranasal sinus | 5.53e-17 | 1 |
uterine epithelium | 6.42e-09 | 2 |
cervix epithelium | 6.42e-09 | 2 |
neocortex | 3.89e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 5.53e-17 | 1 |
maxillary sinus cancer | 5.53e-17 | 1 |
lung small cell carcinoma | 2.64e-16 | 4 |
bronchus cancer | 9.95e-10 | 7 |
bronchogenic carcinoma | 9.95e-10 | 7 |
respiratory system cancer | 2.68e-09 | 16 |
signet ring cell adenocarcinoma | 8.09e-09 | 2 |
lung carcinoma | 9.20e-08 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.