FFCP PHASE1:Hg19::chr7:1968325..1968349,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C97|description=CAGE_peak_at_chr7:1968325..1968349,-|id=chr7:1968325..1968349,-|ontology_enrichment_celltype=CL:0002553!7.01e-09!1|ontology_enrichment_celltype_v019=CL:0002553;3.12e-21;1!CL:0000182;1.27e-07;12|ontology_enrichment_celltype_v019_2=CL:0002553,2.82e-21,1;CL:0000182,1.29e-07,12|ontology_enrichment_development_v019=UBERON:0006242;6.98e-21;1!UBERON:0004161;4.34e-08;11!UBERON:0009497;5.59e-07;13|ontology_enrichment_disease=DOID:3111!1.84e-08!1;DOID:3603!1.84e-08!1;DOID:5409!2.96e-08!4;DOID:5093!4.54e-08!4;DOID:1612!4.54e-08!4|ontology_enrichment_disease_v019=DOID:3493;3.02e-11;2|ontology_enrichment_disease_v019_2=DOID:3493,3.02e-11,2|ontology_enrichment_uberon=UBERON:0007029!1.18e-08!1|ontology_enrichment_uberon_v019=UBERON:0002423;4.78e-13;25!UBERON:0002107;4.58e-10;19!UBERON:0006925;4.58e-10;19!UBERON:0002110;7.50e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0009497,4.71e-13,25;UBERON:0000015,4.71e-13,25;UBERON:0002423,4.71e-13,25;UBERON:0006235,4.71e-13,25;UBERON:0004161,4.71e-13,25;UBERON:0002107,4.44e-10,19;UBERON:0006925,4.44e-10,19;UBERON:0008836,4.44e-10,19;UBERON:0008835,8.70e-09,22;UBERON:0003894,8.70e-09,22;UBERON:0005911,1.16e-08,82;UBERON:0009854,1.98e-08,23;UBERON:0002110,7.76e-08,3;UBERON:0006242,7.76e-08,3;UBERON:0007499,8.41e-08,25;UBERON:0009856,1.60e-07,26;UBERON:0005177,5.32e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,1.1384259382189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,0,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60399523799829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53561982448581,0,0,0,0.971421986118279,0.233939463462106,0.198950775161368,0,0.33883824611688,0,33.5137512718015,0.154348316215889,0,16.9314226690148,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p@chr7:1968325..1968349,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr7:1968325..1968349,- | |||
|id=chr7:1968325..1968349,- | |||
|ontology_enrichment_celltype=CL:0002553!7.01e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.12e-21;1!CL:0000182;1.27e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.82e-21,1;CL:0000182,1.29e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;6.98e-21;1!UBERON:0004161;4.34e-08;11!UBERON:0009497;5.59e-07;13 | |||
|ontology_enrichment_disease=DOID:3111!1.84e-08!1;DOID:3603!1.84e-08!1;DOID:5409!2.96e-08!4;DOID:5093!4.54e-08!4;DOID:1612!4.54e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.02e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007029!1.18e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.78e-13;25!UBERON:0002107;4.58e-10;19!UBERON:0006925;4.58e-10;19!UBERON:0002110;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,4.71e-13,25;UBERON:0000015,4.71e-13,25;UBERON:0002423,4.71e-13,25;UBERON:0006235,4.71e-13,25;UBERON:0004161,4.71e-13,25;UBERON:0002107,4.44e-10,19;UBERON:0006925,4.44e-10,19;UBERON:0008836,4.44e-10,19;UBERON:0008835,8.70e-09,22;UBERON:0003894,8.70e-09,22;UBERON:0005911,1.16e-08,82;UBERON:0009854,1.98e-08,23;UBERON:0002110,7.76e-08,3;UBERON:0006242,7.76e-08,3;UBERON:0007499,8.41e-08,25;UBERON:0009856,1.60e-07,26;UBERON:0005177,5.32e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,1.1384259382189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,0,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60399523799829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53561982448581,0,0,0,0.971421986118279,0.233939463462106,0.198950775161368,0,0.33883824611688,0,33.5137512718015,0.154348316215889,0,16.9314226690148,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr7:1968325..1968349,- | |||
}} |
Revision as of 00:23, 14 September 2013
Short description: | p@chr7:1968325..1968349, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:1968325..1968349, - |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.82e-21 | 1 |
hepatocyte | 1.29e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 4.71e-13 | 25 |
anatomical boundary | 4.71e-13 | 25 |
hepatobiliary system | 4.71e-13 | 25 |
foregut-midgut junction | 4.71e-13 | 25 |
septum transversum | 4.71e-13 | 25 |
liver | 4.44e-10 | 19 |
digestive gland | 4.44e-10 | 19 |
liver bud | 4.44e-10 | 19 |
hepatic diverticulum | 8.70e-09 | 22 |
liver primordium | 8.70e-09 | 22 |
endo-epithelium | 1.16e-08 | 82 |
digestive tract diverticulum | 1.98e-08 | 23 |
gallbladder | 7.76e-08 | 3 |
gall bladder primordium | 7.76e-08 | 3 |
epithelial sac | 8.41e-08 | 25 |
sac | 1.60e-07 | 26 |
trunk region element | 5.32e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.02e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.