FFCP PHASE1:Hg19::chr7:3471012..3471016,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1282|description=CAGE_peak_at_chr7:3471012..3471016,+|id=chr7:3471012..3471016,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;3.70e-08;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006965;2.00e-09;2|ontology_enrichment_disease=DOID:3095!7.76e-08!22;DOID:2994!7.76e-08!22;DOID:171!7.56e-07!10|ontology_enrichment_disease_v019=DOID:171;1.57e-15;10!DOID:3119;8.89e-08;14!DOID:169;7.24e-07;6|ontology_enrichment_disease_v019_2=DOID:171,2.57e-15,10;DOID:3119,6.51e-08,14|ontology_enrichment_uberon=UBERON:0007023!4.90e-14!115;UBERON:0000073!8.15e-10!94;UBERON:0001016!8.15e-10!94;UBERON:0000956!9.58e-10!25;UBERON:0000203!9.58e-10!25;UBERON:0002346!4.35e-09!90;UBERON:0002020!4.94e-09!34;UBERON:0003528!4.94e-09!34;UBERON:0001869!6.12e-09!32;UBERON:0001893!7.32e-09!34;UBERON:0001049!1.10e-08!57;UBERON:0005068!1.10e-08!57;UBERON:0006241!1.10e-08!57;UBERON:0007135!1.10e-08!57;UBERON:0001017!1.36e-08!82;UBERON:0005743!2.24e-08!86;UBERON:0002791!2.32e-08!33;UBERON:0002780!5.68e-08!41;UBERON:0001890!5.68e-08!41;UBERON:0006240!5.68e-08!41;UBERON:0000955!5.78e-08!69;UBERON:0006238!5.78e-08!69;UBERON:0003080!1.26e-07!42;UBERON:0001950!1.55e-07!20;UBERON:0002619!1.56e-07!22;UBERON:0000924!3.78e-07!173;UBERON:0006601!3.78e-07!173;UBERON:0003075!5.29e-07!86;UBERON:0007284!5.29e-07!86;UBERON:0000153!5.76e-07!129;UBERON:0007811!5.76e-07!129|ontology_enrichment_uberon_v019=UBERON:0002050;6.40e-15;5!UBERON:0005423;6.40e-15;5!UBERON:0002346;3.32e-11;4!UBERON:0000923;3.32e-11;4!UBERON:0010316;3.32e-11;4!UBERON:0005291;3.32e-11;4!UBERON:0003714;2.00e-09;2!UBERON:0000013;3.70e-08;5!UBERON:0002410;3.70e-08;5!UBERON:0000922;9.27e-08;49!UBERON:0000010;1.13e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.09e-09,2;UBERON:0000013,5.68e-08,5;UBERON:0002410,5.68e-08,5;UBERON:0000010,1.49e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,1.36874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.472674085820339,0.221729397462564,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0,0.673344455816265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0,0.310983165046111,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,2.27308917445131,0,0,0,1.9882952955326,0.281338832821026,0,0,0,1.79323189425963,0.828851746593443,5.03865495708552,1.22722419002586,0,0,0,0.179021174675609,0.511572370226872,0.197286811273867,0,0,0,0,1.99613798001194,1.04171104434093,0,0,0.1137934482855,0,0,2.06846023944879,1.74962768029953,0.347249989866585,0,0,0,0.221158519862449,0,0,0.10893846351899,0.278847488557207,0.538651809526579,0,0.69169171316418,0.628303510868405,0.434589487688032,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73110911793673,0,0,0,0.593042257361244,0.123563938946503,0.522109747527277,0.134802265961354,0,0,0,0.19566461893209,0,1.18375320854817,0,1.22429104652196,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.261177619741208,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0.599428828746391,0,0.572682980829578,0.514784993585894,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0,0,0,0.136905378891993,0,0,0.788662062837943,0,0.916641696046735,3.58936512288407,0,0,0,0.470284307407084,0,0,0,0.164831716762333,0.26961417541674,0.0984274815147488,0,0,0.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1282 | |||
|description=CAGE_peak_at_chr7:3471012..3471016,+ | |||
|id=chr7:3471012..3471016,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.70e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.00e-09;2 | |||
|ontology_enrichment_disease=DOID:3095!7.76e-08!22;DOID:2994!7.76e-08!22;DOID:171!7.56e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.57e-15;10!DOID:3119;8.89e-08;14!DOID:169;7.24e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.57e-15,10;DOID:3119,6.51e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.90e-14!115;UBERON:0000073!8.15e-10!94;UBERON:0001016!8.15e-10!94;UBERON:0000956!9.58e-10!25;UBERON:0000203!9.58e-10!25;UBERON:0002346!4.35e-09!90;UBERON:0002020!4.94e-09!34;UBERON:0003528!4.94e-09!34;UBERON:0001869!6.12e-09!32;UBERON:0001893!7.32e-09!34;UBERON:0001049!1.10e-08!57;UBERON:0005068!1.10e-08!57;UBERON:0006241!1.10e-08!57;UBERON:0007135!1.10e-08!57;UBERON:0001017!1.36e-08!82;UBERON:0005743!2.24e-08!86;UBERON:0002791!2.32e-08!33;UBERON:0002780!5.68e-08!41;UBERON:0001890!5.68e-08!41;UBERON:0006240!5.68e-08!41;UBERON:0000955!5.78e-08!69;UBERON:0006238!5.78e-08!69;UBERON:0003080!1.26e-07!42;UBERON:0001950!1.55e-07!20;UBERON:0002619!1.56e-07!22;UBERON:0000924!3.78e-07!173;UBERON:0006601!3.78e-07!173;UBERON:0003075!5.29e-07!86;UBERON:0007284!5.29e-07!86;UBERON:0000153!5.76e-07!129;UBERON:0007811!5.76e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;6.40e-15;5!UBERON:0005423;6.40e-15;5!UBERON:0002346;3.32e-11;4!UBERON:0000923;3.32e-11;4!UBERON:0010316;3.32e-11;4!UBERON:0005291;3.32e-11;4!UBERON:0003714;2.00e-09;2!UBERON:0000013;3.70e-08;5!UBERON:0002410;3.70e-08;5!UBERON:0000922;9.27e-08;49!UBERON:0000010;1.13e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.09e-09,2;UBERON:0000013,5.68e-08,5;UBERON:0002410,5.68e-08,5;UBERON:0000010,1.49e-07,8 | |||
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| |||
|short_description=p@chr7:3471012..3471016,+ | |||
}} |
Revision as of 01:00, 14 September 2013
Short description: | p@chr7:3471012..3471016, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:3471012..3471016, + |
Coexpression cluster: | C1282_small_neuroectodermal_occipital_argyrophil_neuroblastoma_aorta_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 3.09e-09 | 2 |
sympathetic nervous system | 5.68e-08 | 5 |
autonomic nervous system | 5.68e-08 | 5 |
peripheral nervous system | 1.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.57e-15 | 10 |
gastrointestinal system cancer | 6.51e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.