FFCP PHASE1:Hg19::chr9:16704680..16704687,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:16704680..16704687,-|id=chr9:16704680..16704687,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000064;6.43e-23;3!CL:0000067;6.43e-23;3!CL:0005012;6.43e-23;3!CL:0002304;6.43e-23;3!CL:0000319;8.01e-18;1!CL:0002138;5.67e-12;6!CL:0000680;1.61e-10;7!CL:0000159;1.38e-09;2!CL:0000594;5.97e-07;3!CL:0000515;8.38e-07;3|ontology_enrichment_celltype_v019_2=CL:0000064,7.20e-23,3;CL:0000067,7.20e-23,3;CL:0005012,7.20e-23,3;CL:0002304,7.20e-23,3;CL:0000319,8.72e-18,1;CL:0005020,4.30e-12,6;CL:0002138,4.30e-12,6;CL:0005022,4.30e-12,6;CL:0000159,1.44e-09,2;CL:0000594,5.80e-07,3|ontology_enrichment_development_v019=UBERON:0000358;2.90e-18;1!CL:0005022;5.67e-12;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3030;8.01e-18;1|ontology_enrichment_disease_v019_2=DOID:3030,8.72e-18,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001778;6.43e-23;3!UBERON:0001775;6.43e-23;3!UBERON:0000488;1.86e-17;4!UBERON:0002203;5.67e-12;6!UBERON:0001768;5.67e-12;6!UBERON:0002200;5.67e-12;6!UBERON:0001473;3.27e-09;8!UBERON:0004536;3.27e-09;8!UBERON:0006558;3.27e-09;8!UBERON:0002465;1.52e-07;10!UBERON:0007625;6.16e-07;11!UBERON:0006876;6.16e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0001778,7.20e-23,3;UBERON:0001775,7.20e-23,3;UBERON:0000488,2.02e-17,4;UBERON:0002203,6.00e-12,6;UBERON:0001768,6.00e-12,6;UBERON:0002200,6.00e-12,6;UBERON:0001473,2.66e-09,8;UBERON:0004536,2.66e-09,8;UBERON:0006558,2.66e-09,8;UBERON:0002465,1.29e-07,10;UBERON:0007625,6.35e-07,11;UBERON:0006876,6.35e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03988298880475,0.443458794925128,1.31752178539689,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,1.29208379584664,1.77883131343355,0.33472061276467,0,0,0,0,0,0.892997282840798,0.673588117878509,0.337834441449967,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0,0.311211035399766,0,0.326923806226917,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.491337269247072,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,1.0126579934476,0,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.433099343283221,0,0.570762456703795,0,0,0.738651018262192,0,0,0,0,0.141775097242386,0,0,0,0.985326475791887,0.264145302039678,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0.479249710983165,0,0,0,1.02738161275192,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0,0.157702415033935,0.468565659970853,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0.413509717453592,2.47066563197029,0.725083469571143,0.93749290157711,0.178064071293475,0,0,0,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0,0.143124886741991,0,0,0.762520775695299,0,0,0.318203247925937,0,0.539617372749944,0.823611089208164,0.589062011728432,0.202182481573316,0,0,0,0,0,0,0.424216295861138,0,0.551365343546124,0,0,0,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0.398495976502139,0,0,0.409074730008619,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,0,0,0,0,0,0,0,0,1.46205491157214,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0.202203398942031,0,0,0.182454789215666,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0.19351266257817,0,0.410577285266046,0,0,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.815425236441684,0.209205692624666,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0.08467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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:16704680..16704687,- | |||
|id=chr9:16704680..16704687,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;6.43e-23;3!CL:0000067;6.43e-23;3!CL:0005012;6.43e-23;3!CL:0002304;6.43e-23;3!CL:0000319;8.01e-18;1!CL:0002138;5.67e-12;6!CL:0000680;1.61e-10;7!CL:0000159;1.38e-09;2!CL:0000594;5.97e-07;3!CL:0000515;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,7.20e-23,3;CL:0000067,7.20e-23,3;CL:0005012,7.20e-23,3;CL:0002304,7.20e-23,3;CL:0000319,8.72e-18,1;CL:0005020,4.30e-12,6;CL:0002138,4.30e-12,6;CL:0005022,4.30e-12,6;CL:0000159,1.44e-09,2;CL:0000594,5.80e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.90e-18;1!CL:0005022;5.67e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;8.01e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,8.72e-18,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;6.43e-23;3!UBERON:0001775;6.43e-23;3!UBERON:0000488;1.86e-17;4!UBERON:0002203;5.67e-12;6!UBERON:0001768;5.67e-12;6!UBERON:0002200;5.67e-12;6!UBERON:0001473;3.27e-09;8!UBERON:0004536;3.27e-09;8!UBERON:0006558;3.27e-09;8!UBERON:0002465;1.52e-07;10!UBERON:0007625;6.16e-07;11!UBERON:0006876;6.16e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,7.20e-23,3;UBERON:0001775,7.20e-23,3;UBERON:0000488,2.02e-17,4;UBERON:0002203,6.00e-12,6;UBERON:0001768,6.00e-12,6;UBERON:0002200,6.00e-12,6;UBERON:0001473,2.66e-09,8;UBERON:0004536,2.66e-09,8;UBERON:0006558,2.66e-09,8;UBERON:0002465,1.29e-07,10;UBERON:0007625,6.35e-07,11;UBERON:0006876,6.35e-07,11 | |||
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|short_description=p@chr9:16704680..16704687,- | |||
}} |
Revision as of 08:30, 14 September 2013
Short description: | p@chr9:16704680..16704687, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:16704680..16704687, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 7.20e-23 | 3 |
ciliated epithelial cell | 7.20e-23 | 3 |
multi-ciliated epithelial cell | 7.20e-23 | 3 |
non-pigmented ciliary epithelial cell | 7.20e-23 | 3 |
mucus secreting cell | 8.72e-18 | 1 |
lymphangioblast | 4.30e-12 | 6 |
endothelial cell of lymphatic vessel | 4.30e-12 | 6 |
vascular lymphangioblast | 4.30e-12 | 6 |
seromucus secreting cell | 1.44e-09 | 2 |
skeletal muscle satellite cell | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 7.20e-23 | 3 |
ciliary body | 7.20e-23 | 3 |
atypical epithelium | 2.02e-17 | 4 |
vasculature of eye | 6.00e-12 | 6 |
uvea | 6.00e-12 | 6 |
vasculature of head | 6.00e-12 | 6 |
lymphatic vessel | 2.66e-09 | 8 |
lymph vasculature | 2.66e-09 | 8 |
lymphatic part of lymphoid system | 2.66e-09 | 8 |
lymphoid system | 1.29e-07 | 10 |
pigment epithelium of eye | 6.35e-07 | 11 |
vasculature of organ | 6.35e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 8.72e-18 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.