FFCP PHASE1:Hg19::chr9:71736134..71736154,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9414|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11828|TSSclassifier=S|UniProt=B7Z2R3|association_with_transcript=-25bp_to_NM_001170414_5end|description=CAGE_peak_9_at_TJP2_5end|id=chr9:71736134..71736154,+|ontology_enrichment_celltype=CL:0000066!1.65e-18!254|ontology_enrichment_celltype_v019=CL:0000039;4.58e-08;7!CL:0000586;4.58e-08;7!CL:0000182;3.84e-07;12|ontology_enrichment_celltype_v019_2=CL:0000039,3.27e-08,7;CL:0000586,3.27e-08,7;CL:0000182,3.84e-07,12|ontology_enrichment_development_v019=UBERON:0004161;4.05e-11;11!UBERON:0001041;1.84e-09;30!UBERON:0009497;2.74e-09;13!UBERON:0003104;1.97e-07;31|ontology_enrichment_disease=DOID:305!6.84e-21!106;DOID:0050687!3.50e-13!143;DOID:162!1.15e-07!235;DOID:299!4.28e-07!25;DOID:14566!5.49e-07!239|ontology_enrichment_disease_v019=DOID:3493;4.27e-08;2!DOID:1325;1.20e-07;7!DOID:3904;1.20e-07;7|ontology_enrichment_disease_v019_2=DOID:3493,5.86e-08,2;DOID:1325,8.06e-08,7;DOID:3904,8.06e-08,7;DOID:305,8.74e-08,106|ontology_enrichment_uberon=UBERON:0001007!1.07e-10!155;UBERON:0001555!1.07e-10!155;UBERON:0007026!1.07e-10!155;UBERON:0004119!1.95e-10!169;UBERON:0000925!1.95e-10!169;UBERON:0006595!1.95e-10!169;UBERON:0004921!2.48e-10!129;UBERON:0004185!2.48e-10!129;UBERON:0000481!1.60e-07!347;UBERON:0000077!1.95e-07!130;UBERON:0000477!2.26e-07!286;UBERON:0000064!3.26e-07!219;UBERON:0004111!3.38e-07!241;UBERON:0000468!7.69e-07!659|ontology_enrichment_uberon_v019=UBERON:0005409;2.28e-10;22!UBERON:0000160;2.19e-08;17!UBERON:0002107;4.47e-08;19!UBERON:0006925;4.47e-08;19!UBERON:0002423;1.52e-07;25!UBERON:0002108;7.97e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.46e-09,101;UBERON:0009856,3.73e-09,26;UBERON:0005172,5.82e-09,54;UBERON:0005173,5.82e-09,54;UBERON:0005409,8.09e-09,25;UBERON:0009854,2.42e-08,23;UBERON:0000160,2.88e-08,17;UBERON:0004921,3.00e-08,118;UBERON:0002107,3.63e-08,19;UBERON:0006925,3.63e-08,19;UBERON:0008836,3.63e-08,19;UBERON:0002417,9.33e-08,60;UBERON:0000916,9.33e-08,60;UBERON:0007499,1.02e-07,25;UBERON:0009497,1.40e-07,25;UBERON:0000015,1.40e-07,25;UBERON:0002423,1.40e-07,25;UBERON:0006235,1.40e-07,25;UBERON:0004161,1.40e-07,25;UBERON:0008835,6.64e-07,22;UBERON:0003894,6.64e-07,22;UBERON:0002108,7.33e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0.572471974262113,0.136874425072884,1.50651167513763,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0.79504962946682,0,0.347140501607594,1.13061588384802,0.838998872419812,0,0.626984899610432,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,0,0.535798369704479,0.673588117878509,0.788280363383256,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0.323745888736263,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0.121973706129595,0.795178609928912,0.580969714347592,0.621966330092223,1.00928340350251,0.72995471815166,0,0,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0.330881918197182,0.435758888184812,0,0.134831308160164,0.588664395376038,0,0,0,0,0,1.26755034821831,0,0.590789906681404,1.32438929824395,0.614942192715568,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0,0,0,0,0,0.771622122786426,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0.451199612907412,1.07821471946181,0,1.46139224653261,0.73886140225013,0,0.340187410553031,0.215915916102139,0,0.270946437543853,1.50506932156456,0.764628819135115,2.49322802678617,0.895499018888713,0,0.261435451024901,0.512900250232778,0.328014645699706,0,1.854738209659,0.732555718546747,0.82509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.941438007767792,0,0,0.443430153536676,0,0.50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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9414 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11828 | |||
|TSSclassifier=S | |||
|UniProt=B7Z2R3 | |||
|association_with_transcript=-25bp_to_NM_001170414_5end | |||
|description=CAGE_peak_9_at_TJP2_5end | |||
|id=chr9:71736134..71736154,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.65e-18!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.58e-08;7!CL:0000586;4.58e-08;7!CL:0000182;3.84e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.27e-08,7;CL:0000586,3.27e-08,7;CL:0000182,3.84e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.05e-11;11!UBERON:0001041;1.84e-09;30!UBERON:0009497;2.74e-09;13!UBERON:0003104;1.97e-07;31 | |||
|ontology_enrichment_disease=DOID:305!6.84e-21!106;DOID:0050687!3.50e-13!143;DOID:162!1.15e-07!235;DOID:299!4.28e-07!25;DOID:14566!5.49e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.27e-08;2!DOID:1325;1.20e-07;7!DOID:3904;1.20e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.86e-08,2;DOID:1325,8.06e-08,7;DOID:3904,8.06e-08,7;DOID:305,8.74e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.07e-10!155;UBERON:0001555!1.07e-10!155;UBERON:0007026!1.07e-10!155;UBERON:0004119!1.95e-10!169;UBERON:0000925!1.95e-10!169;UBERON:0006595!1.95e-10!169;UBERON:0004921!2.48e-10!129;UBERON:0004185!2.48e-10!129;UBERON:0000481!1.60e-07!347;UBERON:0000077!1.95e-07!130;UBERON:0000477!2.26e-07!286;UBERON:0000064!3.26e-07!219;UBERON:0004111!3.38e-07!241;UBERON:0000468!7.69e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.28e-10;22!UBERON:0000160;2.19e-08;17!UBERON:0002107;4.47e-08;19!UBERON:0006925;4.47e-08;19!UBERON:0002423;1.52e-07;25!UBERON:0002108;7.97e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.46e-09,101;UBERON:0009856,3.73e-09,26;UBERON:0005172,5.82e-09,54;UBERON:0005173,5.82e-09,54;UBERON:0005409,8.09e-09,25;UBERON:0009854,2.42e-08,23;UBERON:0000160,2.88e-08,17;UBERON:0004921,3.00e-08,118;UBERON:0002107,3.63e-08,19;UBERON:0006925,3.63e-08,19;UBERON:0008836,3.63e-08,19;UBERON:0002417,9.33e-08,60;UBERON:0000916,9.33e-08,60;UBERON:0007499,1.02e-07,25;UBERON:0009497,1.40e-07,25;UBERON:0000015,1.40e-07,25;UBERON:0002423,1.40e-07,25;UBERON:0006235,1.40e-07,25;UBERON:0004161,1.40e-07,25;UBERON:0008835,6.64e-07,22;UBERON:0003894,6.64e-07,22;UBERON:0002108,7.33e-07,4 | |||
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| |||
|short_description=p9@TJP2 | |||
}} |
Revision as of 09:15, 14 September 2013
Short description: | p9@TJP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_TJP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_NM_001170414_5end |
EntrezGene: | TJP2 |
HGNC: | 11828 |
UniProt: | B7Z2R3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.27e-08 | 7 |
germ cell | 3.27e-08 | 7 |
hepatocyte | 3.84e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 2.46e-09 | 101 |
sac | 3.73e-09 | 26 |
abdomen element | 5.82e-09 | 54 |
abdominal segment element | 5.82e-09 | 54 |
gastrointestinal system | 8.09e-09 | 25 |
digestive tract diverticulum | 2.42e-08 | 23 |
intestine | 2.88e-08 | 17 |
subdivision of digestive tract | 3.00e-08 | 118 |
liver | 3.63e-08 | 19 |
digestive gland | 3.63e-08 | 19 |
liver bud | 3.63e-08 | 19 |
abdominal segment of trunk | 9.33e-08 | 60 |
abdomen | 9.33e-08 | 60 |
epithelial sac | 1.02e-07 | 25 |
epithelium of foregut-midgut junction | 1.40e-07 | 25 |
anatomical boundary | 1.40e-07 | 25 |
hepatobiliary system | 1.40e-07 | 25 |
foregut-midgut junction | 1.40e-07 | 25 |
septum transversum | 1.40e-07 | 25 |
hepatic diverticulum | 6.64e-07 | 22 |
liver primordium | 6.64e-07 | 22 |
small intestine | 7.33e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.86e-08 | 2 |
bronchus cancer | 8.06e-08 | 7 |
bronchogenic carcinoma | 8.06e-08 | 7 |
carcinoma | 8.74e-08 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.