FFCP PHASE1:Hg19::chr11:1949886..1949907,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr11:1949886..1949907,+ | |||
|id=chr11:1949886..1949907,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.07e-12!3;CL:0002580!8.42e-12!3;CL:0002536!1.03e-08!2;CL:0002537!6.99e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.64e-64;19!CL:0002541;2.25e-46;3!CL:0002537;1.44e-28;5!CL:0002577;1.86e-21;3!CL:0002581;1.53e-16;1!CL:0002536;7.79e-09;2!CL:0000134;9.00e-09;55!CL:0000723;4.26e-08;61!CL:0000048;3.62e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.06e-64,19;CL:0002541,3.06e-46,3;CL:0002537,1.44e-28,5;CL:0002577,1.76e-21,3;CL:0002581,1.41e-16,1;CL:0002536,8.09e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.18e-32!14;UBERON:0000158!4.18e-32!14;UBERON:0003124!6.15e-20!7;UBERON:0000478!1.13e-17!24;UBERON:0000305!4.24e-14!7;UBERON:0000476!1.07e-12!3;UBERON:0000920!1.07e-12!3;UBERON:0004871!2.74e-12!8;UBERON:0000974!4.31e-12!10;UBERON:0004923!6.11e-10!57;UBERON:0001987!2.01e-09!4;UBERON:0004340!2.01e-09!4;UBERON:0003343!2.24e-08!4;UBERON:0004785!2.24e-08!4;UBERON:0000341!2.34e-08!2;UBERON:0001443!2.85e-08!11;UBERON:0003729!8.76e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.55e-74;10!UBERON:0000158;2.55e-74;10!UBERON:0000478;8.29e-51;24!UBERON:0003124;2.25e-46;3!UBERON:0000920;2.25e-46;3!UBERON:0000305;2.06e-35;7!UBERON:0002426;1.53e-16;1!UBERON:0003831;1.53e-16;1!UBERON:0003898;1.53e-16;1!UBERON:0004830;1.53e-16;1!UBERON:0003830;1.53e-16;1!UBERON:0005175;1.53e-16;1!UBERON:0001774;1.53e-16;1!UBERON:0001103;1.53e-16;1!UBERON:0001987;2.35e-16;4!UBERON:0005090;6.17e-09;2!UBERON:0001630;6.17e-09;2!UBERON:0005406;6.17e-09;2!UBERON:0004923;1.37e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.47e-87,14;UBERON:0000158,2.47e-87,14;UBERON:0003124,2.00e-54,7;UBERON:0000478,9.31e-51,24;UBERON:0000920,3.06e-46,3;UBERON:0000305,2.15e-35,7;UBERON:0004871,4.94e-31,8;UBERON:0004923,4.71e-18,66;UBERON:0002426,1.65e-16,1;UBERON:0003831,1.65e-16,1;UBERON:0003898,1.65e-16,1;UBERON:0004830,1.65e-16,1;UBERON:0003830,1.65e-16,1;UBERON:0005175,1.65e-16,1;UBERON:0001774,1.65e-16,1;UBERON:0001103,1.65e-16,1;UBERON:0010084,1.65e-16,1;UBERON:0001987,2.26e-16,4;UBERON:0004340,2.26e-16,4;UBERON:0005406,5.94e-09,2;UBERON:0005090,6.42e-09,2;UBERON:0001630,6.42e-09,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.436882744260345,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03127571446259,0,5.44302527993425,0.496215615637554,0.153461973288062,0.561320188866147,0,0,0,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4419815653429,4.75143489332222,51.602997952671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,5.10401855571071,1.00757352742049,10.6606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37358282073117,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0.115525666150338,0,0,0,0.150420656698515,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,1.82631744101899,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0.476128862927481,0,0.0620747142958579,0,0.0636471582781649,0.404234377916439,0,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr11:1949886..1949907,+ | |||
}} |
Revision as of 06:05, 11 January 2014
Short description: | p@chr11:1949886..1949907, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1949886..1949907, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.06e-64 | 19 |
chorionic membrane mesenchymal stem cell | 3.06e-46 | 3 |
amnion mesenchymal stem cell | 1.44e-28 | 5 |
placental epithelial cell | 1.76e-21 | 3 |
perirenal preadipocyte | 1.41e-16 | 1 |
amniotic epithelial cell | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.47e-87 | 14 |
membranous layer | 2.47e-87 | 14 |
chorion | 2.00e-54 | 7 |
extraembryonic structure | 9.31e-51 | 24 |
egg chorion | 3.06e-46 | 3 |
amnion | 2.15e-35 | 7 |
somatic layer of lateral plate mesoderm | 4.94e-31 | 8 |
organ component layer | 4.71e-18 | 66 |
chest muscle | 1.65e-16 | 1 |
respiratory system muscle | 1.65e-16 | 1 |
skeletal muscle of trunk | 1.65e-16 | 1 |
respiratory system skeletal muscle | 1.65e-16 | 1 |
thoracic segment muscle | 1.65e-16 | 1 |
chest organ | 1.65e-16 | 1 |
muscle of trunk | 1.65e-16 | 1 |
diaphragm | 1.65e-16 | 1 |
future diaphragm | 1.65e-16 | 1 |
placenta | 2.26e-16 | 4 |
allantois | 2.26e-16 | 4 |
perirenal fat | 5.94e-09 | 2 |
muscle structure | 6.42e-09 | 2 |
muscle organ | 6.42e-09 | 2 |