FFCP PHASE1:Hg19::chr12:131438753..131438771,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283383 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19893 | |||
|TSSclassifier=strong | |||
|UniProt=F5H7I3 | |||
|association_with_transcript=-166bp_to_ENST00000542091_5end | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_4_at_GPR133_5end | |||
|id=chr12:131438753..131438771,+ | |||
|ontology_enrichment_celltype=CL:0000453!1.13e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000453;7.58e-29;5!CL:0000990;3.78e-16;8!CL:0000451;2.98e-13;10!CL:0000511;2.16e-10;1!CL:0002625;2.16e-10;1!CL:0000216;2.16e-10;1!CL:0002591;6.91e-10;1!CL:0002616;6.91e-10;1!CL:0000062;3.26e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.72e-29,5;CL:0000990,3.24e-16,8;CL:0000451,2.63e-13,10;CL:0000511,2.16e-10,1;CL:0002625,2.16e-10,1;CL:0000216,2.16e-10,1;CL:0002616,4.06e-10,1;CL:0002591,8.99e-10,1;CL:0000062,1.31e-07,11;CL:0000375,1.31e-07,11;CL:0000335,1.31e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;1.26e-07;11!UBERON:0004161;1.53e-07;11!UBERON:0001041;4.75e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.24e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,3.71e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.72e-10!115;UBERON:0004457!5.68e-08!12;UBERON:0000042!5.68e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.16e-10;1!UBERON:0001343;2.16e-10;1!UBERON:0004910;2.16e-10;1!UBERON:0004813;2.16e-10;1!UBERON:0002107;2.16e-07;19!UBERON:0006925;2.16e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.16e-10,1;UBERON:0001343,2.16e-10,1;UBERON:0004910,2.16e-10,1;UBERON:0005154,2.16e-10,1;UBERON:0005295,2.16e-10,1;UBERON:0004813,2.16e-10,1;UBERON:0005297,2.16e-10,1;UBERON:0005294,2.16e-10,1;UBERON:0010141,2.16e-10,1;UBERON:0005891,2.16e-10,1;UBERON:0002107,2.05e-07,19;UBERON:0006925,2.05e-07,19;UBERON:0008836,2.05e-07,19 | |||
|phase1_expression=0.908391896352783,0,0.986680828671798,0,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0.37223371266318,0.168776332241266,0,0,0.184099797284599,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,1.04007436911366,0,0,0,0.714889968290738,0,0,0,0,0,0.301439377059586,0.871533458600294,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.61384789315225,0,2.30650468660262,0.511707249066704,0.64341568457443,0,0,0,0,0,0,0.483437798366489,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,1.09883357782012,2.88783249722058,0,0,6.42735719376638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,1.13008116620243,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,3.95153871551882,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.5745161103971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26675244876796,0,0,0,0,0,2.17727711363265,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0,0.21787692703798,0,0.153900517007594,0.341826167541004,0,0,0.325942115766024,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,2.4023299700675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.399358000997982,0,0.223171457441873,0,0,1.16495949527454,0.315132729228895,0.164831716762333,0.202210631562555,0,0,0,0.408610218334727,0,0,0,0.899895566206002,1.5476039091159,0.121499113316049,0,0,0.262272940674991,0,3.40645944732405,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,1.32506888912221,0,0.26446520348538,0,0,0.320362237703084,1.41483874589699,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0.300515217994437,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,37.0234586794838,20.5940502485713,10.1410544438623,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,1.39241355481392,0.300841313397029,0,0,0.261906694481422,0,0,0,0,0,0.317079050969534,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0.887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.929195074296532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0.196308467114945,0,0,0.169927114687817,0,0.257831551894309,0.399764623699716,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0,0.275684698604535,0,0.0757786982182394,0,0,0.310298987585686,0.213233981900981,0,0,0.0620747142958579,0,0.190941474834495,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 | |||
|short_description=p4@GPR133 | |||
}} |
Revision as of 16:44, 11 January 2014
Short description: | p4@GPR133 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GPR133_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -166bp_to_ENST00000542091_5end |
EntrezGene: | GPR133 |
HGNC: | 19893 |
UniProt: | F5H7I3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.72e-29 | 5 |
conventional dendritic cell | 3.24e-16 | 8 |
dendritic cell | 2.63e-13 | 10 |
androgen binding protein secreting cell | 2.16e-10 | 1 |
seminiferous tubule epithelial cell | 2.16e-10 | 1 |
Sertoli cell | 2.16e-10 | 1 |
perirenal adipocyte cell | 4.06e-10 | 1 |
smooth muscle cell of the pulmonary artery | 8.99e-10 | 1 |
osteoblast | 1.31e-07 | 11 |
osteoprogenitor cell | 1.31e-07 | 11 |
mesenchyme condensation cell | 1.31e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.16e-10 | 1 |
seminiferous tubule of testis | 2.16e-10 | 1 |
epithelium of male gonad | 2.16e-10 | 1 |
epithelial cord | 2.16e-10 | 1 |
sex cord | 2.16e-10 | 1 |
seminiferous tubule epithelium | 2.16e-10 | 1 |
testis sex cord | 2.16e-10 | 1 |
genital ridge | 2.16e-10 | 1 |
primitive sex cord of indifferent gonad | 2.16e-10 | 1 |
coelomic epithelium | 2.16e-10 | 1 |
liver | 2.05e-07 | 19 |
digestive gland | 2.05e-07 | 19 |
liver bud | 2.05e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 3.71e-10 | 1 |