FFCP PHASE1:Hg19::chr14:96671244..96671254,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=G3V318 | |||
|association_with_transcript=63bp_to_ENST00000553811_5end | |||
|description=CAGE_peak_1_at_ENST00000553811_5end | |||
|id=chr14:96671244..96671254,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.97e-14!180;CL:0000057!2.01e-10!75;CL:0000499!1.29e-08!27;CL:0000183!5.38e-08!59;CL:0000192!7.92e-08!42;CL:0000514!7.92e-08!42;CL:0000187!9.04e-08!54;CL:0000680!1.18e-07!57;CL:0000056!1.18e-07!57;CL:0000355!1.18e-07!57;CL:0000393!2.09e-07!60;CL:0000211!2.09e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000499;9.93e-12;28!CL:0000135;1.12e-07;3!CL:0000388;1.12e-07;3!CL:0000569;1.92e-07;4!CL:0002622;2.50e-07;3!CL:0002552;4.08e-07;5!CL:0000048;4.60e-07;58!CL:0002564;4.84e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,1.20e-11,28;CL:0000569,8.43e-08,4;CL:0000011,8.43e-08,4;CL:0000135,1.34e-07,3;CL:0000388,1.34e-07,3;CL:0002622,2.63e-07,3;CL:0002552,3.57e-07,5;CL:0002564,8.41e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000011;1.92e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.33e-13!95;UBERON:0000914!1.38e-10!83;UBERON:0002329!1.38e-10!83;UBERON:0003077!1.38e-10!83;UBERON:0003059!1.38e-10!83;UBERON:0007282!1.38e-10!83;UBERON:0009618!1.38e-10!83;UBERON:0007285!1.38e-10!83;UBERON:0000486!6.56e-10!82;UBERON:0000161!4.67e-08!35;UBERON:0005256!5.24e-08!143;UBERON:0004290!1.64e-07!70;UBERON:0002385!2.49e-07!63;UBERON:0001015!2.49e-07!63;UBERON:0000383!2.49e-07!63;UBERON:0000165!2.90e-07!28;UBERON:0000930!2.90e-07!28;UBERON:0000475!3.31e-07!365;UBERON:0001134!8.73e-07!61;UBERON:0002036!8.73e-07!61;UBERON:0003082!8.73e-07!61;UBERON:0000481!9.47e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;2.75e-13;8!UBERON:0000982;2.75e-13;8!UBERON:0004770;2.75e-13;8!UBERON:0011135;3.35e-11;5!UBERON:0002216;3.35e-11;5!UBERON:0011134;3.35e-11;5!UBERON:0002209;3.35e-11;5!UBERON:0002213;3.35e-11;5!UBERON:0007844;3.35e-11;5!UBERON:0011138;3.35e-11;5!UBERON:0001130;3.35e-11;5!UBERON:0001066;3.35e-11;5!UBERON:0001468;3.35e-11;5!UBERON:0007846;1.12e-07;3!UBERON:0000043;1.12e-07;3!UBERON:0007845;1.12e-07;3!UBERON:0002242;4.84e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,4.41e-13,8;UBERON:0000982,4.41e-13,8;UBERON:0004770,4.41e-13,8;UBERON:0011135,5.82e-11,5;UBERON:0002216,5.82e-11,5;UBERON:0011134,5.82e-11,5;UBERON:0002209,5.82e-11,5;UBERON:0002213,5.82e-11,5;UBERON:0005856,5.82e-11,5;UBERON:0005866,5.82e-11,5;UBERON:0005863,5.82e-11,5;UBERON:0007844,5.82e-11,5;UBERON:0011138,5.82e-11,5;UBERON:0001130,5.82e-11,5;UBERON:0001066,5.82e-11,5;UBERON:0001468,5.82e-11,5;UBERON:0007846,1.34e-07,3;UBERON:0000043,1.34e-07,3;UBERON:0007845,1.34e-07,3;UBERON:0002242,8.41e-07,3;UBERON:0003068,8.41e-07,3;UBERON:0002328,8.41e-07,3;UBERON:0004880,8.41e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,1.89515962028049,0.783556884599516,0,0,0.436882744260345,0,7.4259811776028,6.62794751455832,0,0.602694528023977,0,1.46379839637152,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.0843174571537,5.0133791063589,3.76600949298142,0.795285947051099,0.486634870302636,0,0,0,0.130979075497713,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.45650098894541,0,0,0,0,0,0,0,0,2.57307626996383,0.576175924479999,0.937285727335186,0.312160076830321,0.570471821544449,1.04614076386261,0,0.161872944368132,0,2.44985005505872,0.737005903870608,2.37649296704261,5.94001428641027,2.71993622206413,0.910161361938026,0,0.505008341862199,0.375355559615893,0,0.877955241761676,0.612975591598039,4.20666564938471,0.113432183160021,0,0.427114777637135,1.05965950579781,0.300091096084402,0.721367704669072,0,0.558350568994769,0.506328996723799,0.0974370051611986,0.757301322732344,0.276149695926898,3.87950536365149,0,0.503760491138201,0.847802961552438,0.57978255948989,1.63647672354501,0.573609190778008,0,0.132529768321485,0,0.207322110030741,0,0,1.56449532329816,0.643240938192885,0,0,0,0.236613600079688,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0.219500570817251,1.1240175325762,0.502644862058154,0.833296006426766,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,1.71697232418975,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0.0895585227028483,0.871901815541886,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,1.45770409648969,1.30788020649984,0.4400297149257,0.646358578788889,3.57656445851882,0,1.06375246633948,2.08014873822732,0,0,0.799266537048298,0.714889968290738,1.08524321078289,0,0,1.42156779497018,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,6.13457458595699,1.00034104211935,3.7977103317963,1.24782516918484,0.535286966391485,0,0.117141414992713,0.601892199455438,2.27407504055985,0,0,0,2.60650843404249,0.783204629850962,1.02943027143257,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,1.02341449813341,0.64341568457443,1.48418066444991,0.308419387605311,1.59805552781814,1.8067974323038,2.59627214591811,1.27831416305955,0,0.601519410909855,0.460404944679482,2.52591785962135,3.27764102412091,5.50722542829581,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0.650060246036521,0,2.12675580242668,0.154048617114644,0,0,0.322260734604821,2.0302337147992,0.340906509664404,0.267096106940212,0.330569830721956,0.384380134730212,1.27612712494584,0.2023155617111,0.929691098594572,1.5740617341532,2.0911118104818,0.616067160352178,0.532306030317022,0,0,0,1.116475108079,0.316379424718726,0.190630193923825,0.767693373934002,0.855877976067841,5.40945521474092,0,0.899362287916574,0.274537029736055,1.06031162111118,0.808729926293264,0,5.05510147486777,0.48763373908959,0.731140468893853,1.05650146756755,5.59649636772742,2.40389234321312,2.26016233240486,1.65409603063837,0.66343897524122,0,0,1.31178950409327,0,0.6196469961995,0,0.143411352204052,0.294747123039363,0,0.709522128141196,9.49984358839489,7.90307743103764,1.89736586882858,1.74967360122491,0.0962221127255121,0,1.08890984861323,0,0.86101074534246,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.73254089635947,0,0,0,0,0.593929361665277,0.307160702099232,0,0,2.67140892054974,0,0,0,0,0.251932747854276,0.613612095012929,0,0,0.179736702294654,0.537063524026827,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.682760689712998,0,0.236387681767936,0,0,0,0,0,0,1.21637185924347,0,0,0,4.1827123283581,0.615602068030377,1.93701494939902,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,1.22206028986725,0,0,0,0.202203398942031,0,0,0,0,0,0.394584402849391,0,0,0.31593289814244,0,0.103688191397247,0,0.330991955875499,0,0,0,0.138674673013139,0,2.54780233277382,0,0.17472666824203,0,0.967563312890852,0.877071805034227,0.492692742319255,1.35784623083787,0,0.225980740780532,0.411125773940253,0.19871461170299,0.126621591911757,1.17330829640882,0,0.640358984218058,0.599428828746391,0,0,0.171594997861965,0,0,1.17847017308398,0,0,0,0.866851769704557,0,0,0,0,0.262887354279314,0.558564802544508,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0.160753148465019,0,0,0.674921674654501,0,0,2.68347750079413,0.394028536495991,0.419636705079985,0,0,0,0,0,0,0,0,1.63293680054705,0,0,0.340776043570843,0.226624183040251,0,0,0.129282956361551,0,1.19760786519031,0,0,0.628817220398664,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| |||
|short_description=p1@ENST00000553811 | |||
}} |
Revision as of 21:48, 11 January 2014
Short description: | p1@ENST00000553811 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000553811_5end |
Coexpression cluster: | NA |
Association with transcript: | 63bp_to_ENST00000553811_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 1.20e-11 | 28 |
cardiac mesenchymal cell | 8.43e-08 | 4 |
migratory trunk neural crest cell | 8.43e-08 | 4 |
fibrocyte | 1.34e-07 | 3 |
tendon cell | 1.34e-07 | 3 |
prostate stromal cell | 2.63e-07 | 3 |
fibroblast of gingiva | 3.57e-07 | 5 |
nucleus pulposus cell of intervertebral disc | 8.41e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
articulation | 4.41e-13 | 8 |
skeletal joint | 4.41e-13 | 8 |
articular system | 4.41e-13 | 8 |
intervertebral cartilage | 5.82e-11 | 5 |
symphysis | 5.82e-11 | 5 |
nonsynovial joint | 5.82e-11 | 5 |
fibrous joint | 5.82e-11 | 5 |
cartilaginous joint | 5.82e-11 | 5 |
developing mesenchymal condensation | 5.82e-11 | 5 |
pre-cartilage condensation | 5.82e-11 | 5 |
cartilaginous condensation | 5.82e-11 | 5 |
cartilage element | 5.82e-11 | 5 |
post-cranial axial skeletal system | 5.82e-11 | 5 |
vertebral column | 5.82e-11 | 5 |
intervertebral disk | 5.82e-11 | 5 |
intervertebral joint | 5.82e-11 | 5 |
dense regular connective tissue | 1.34e-07 | 3 |
tendon | 1.34e-07 | 3 |
regular connective tissue | 1.34e-07 | 3 |
nucleus pulposus | 8.41e-07 | 3 |
axial mesoderm | 8.41e-07 | 3 |
notochord | 8.41e-07 | 3 |
chordamesoderm | 8.41e-07 | 3 |