FFCP PHASE1:Hg19::chr16:28075097..28075108,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=146395 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28283 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UXU4,B3KY67 | |||
|association_with_transcript=-267bp_to_ENST00000380898,ENST00000395724,ENST00000447459,NM_001109763,uc002doz.2,uc010bya.1_5end | |||
|description=CAGE_peak_7_at_GSG1L_5end | |||
|id=chr16:28075097..28075108,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.27e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.03e-70!57;UBERON:0005068!1.03e-70!57;UBERON:0006241!1.03e-70!57;UBERON:0007135!1.03e-70!57;UBERON:0003075!7.54e-65!86;UBERON:0007284!7.54e-65!86;UBERON:0002346!1.53e-61!90;UBERON:0002616!5.14e-60!59;UBERON:0000955!5.19e-56!69;UBERON:0006238!5.19e-56!69;UBERON:0002780!1.93e-55!41;UBERON:0001890!1.93e-55!41;UBERON:0006240!1.93e-55!41;UBERON:0001017!6.12e-55!82;UBERON:0005743!7.91e-55!86;UBERON:0003080!5.54e-54!42;UBERON:0000073!1.31e-51!94;UBERON:0001016!1.31e-51!94;UBERON:0003056!2.14e-50!61;UBERON:0001893!3.84e-48!34;UBERON:0001869!3.70e-47!32;UBERON:0002619!1.28e-45!22;UBERON:0002791!3.16e-45!33;UBERON:0002020!7.70e-44!34;UBERON:0003528!7.70e-44!34;UBERON:0000956!8.33e-40!25;UBERON:0000203!8.33e-40!25;UBERON:0001950!3.54e-39!20;UBERON:0000033!1.74e-35!123;UBERON:0007023!8.11e-35!115;UBERON:0000153!2.08e-33!129;UBERON:0007811!2.08e-33!129;UBERON:0004121!6.39e-33!169;UBERON:0000924!6.30e-32!173;UBERON:0006601!6.30e-32!173;UBERON:0000025!3.45e-19!194;UBERON:0000349!4.86e-19!5;UBERON:0003076!4.44e-17!15;UBERON:0003057!4.44e-17!15;UBERON:0001871!9.47e-16!7;UBERON:0000064!1.27e-14!219;UBERON:0000483!3.49e-14!309;UBERON:0000119!6.05e-14!312;UBERON:0004111!1.34e-13!241;UBERON:0004733!4.74e-13!12;UBERON:0002028!4.74e-13!12;UBERON:0007277!4.74e-13!12;UBERON:0004732!5.71e-12!13;UBERON:0000477!1.37e-11!286;UBERON:0001872!1.38e-11!5;UBERON:0002021!5.97e-11!5;UBERON:0002420!1.67e-10!9;UBERON:0007245!1.67e-10!9;UBERON:0010009!1.67e-10!9;UBERON:0010011!1.67e-10!9;UBERON:0000454!1.67e-10!9;UBERON:0000475!1.02e-09!365;UBERON:0000369!2.62e-09!4;UBERON:0002435!2.62e-09!4;UBERON:0000204!2.62e-09!4;UBERON:0010082!2.62e-09!4;UBERON:0002680!2.80e-09!9;UBERON:0001895!2.80e-09!9;UBERON:0010092!2.80e-09!9;UBERON:0001876!1.15e-08!2;UBERON:0001894!1.28e-08!7;UBERON:0006222!1.28e-08!7;UBERON:0001954!1.60e-08!2;UBERON:0003022!1.60e-08!2;UBERON:0002421!1.60e-08!2;UBERON:0002600!1.60e-08!2;UBERON:0000481!1.89e-08!347;UBERON:0001905!2.39e-08!2;UBERON:0002757!2.39e-08!2;UBERON:0010134!2.39e-08!2;UBERON:0002784!2.39e-08!2;UBERON:0005408!2.39e-08!2;UBERON:0001899!2.39e-08!2;UBERON:0000062!2.93e-08!511;UBERON:0002298!6.03e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001882;1.55e-98;1!UBERON:0005403;1.55e-98;1!UBERON:0000369;6.30e-26;4!UBERON:0002435;6.30e-26;4!UBERON:0000204;6.30e-26;4!UBERON:0000349;4.66e-21;5!UBERON:0009663;1.78e-15;7!UBERON:0002420;2.31e-12;9!UBERON:0000125;2.31e-12;9!UBERON:0007245;2.31e-12;9!UBERON:0002308;2.31e-12;9!UBERON:0010009;2.31e-12;9!UBERON:0010011;2.31e-12;9!UBERON:0000454;2.31e-12;9!UBERON:0000955;8.55e-09;68!UBERON:0001017;3.42e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001882,2.55e-98,1;UBERON:0005403,2.55e-98,1;UBERON:0000369,7.14e-26,4;UBERON:0002435,7.14e-26,4;UBERON:0000204,7.14e-26,4;UBERON:0010082,7.14e-26,4;UBERON:0000349,5.15e-21,5;UBERON:0009663,1.91e-15,7;UBERON:0002420,2.45e-12,9;UBERON:0000125,2.45e-12,9;UBERON:0007245,2.45e-12,9;UBERON:0002308,2.45e-12,9;UBERON:0010009,2.45e-12,9;UBERON:0010011,2.45e-12,9;UBERON:0000454,2.45e-12,9;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,0,0.159633859057151,0.205116364240755,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.206686796501184,0.19024743058172,0.546974809018219,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0.177404740325278,0,0,0.271878931907327,0,0,0,0,0.785577949580009,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@GSG1L | |||
}} |
Revision as of 02:55, 12 January 2014
Short description: | p7@GSG1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GSG1L_5end |
Coexpression cluster: | NA |
Association with transcript: | -267bp_to_ENST00000380898, ENST00000395724, ENST00000447459, NM_001109763, uc002doz.2, uc010bya.1_5end |
EntrezGene: | GSG1L |
HGNC: | 28283 |
UniProt: | Q6UXU4B3KY67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus accumbens | 2.55e-98 | 1 |
ventral striatum | 2.55e-98 | 1 |
corpus striatum | 7.14e-26 | 4 |
striatum | 7.14e-26 | 4 |
ventral part of telencephalon | 7.14e-26 | 4 |
future corpus striatum | 7.14e-26 | 4 |
limbic system | 5.15e-21 | 5 |
telencephalic nucleus | 1.91e-15 | 7 |
basal ganglion | 2.45e-12 | 9 |
neural nucleus | 2.45e-12 | 9 |
nuclear complex of neuraxis | 2.45e-12 | 9 |
nucleus of brain | 2.45e-12 | 9 |
aggregate regional part of brain | 2.45e-12 | 9 |
collection of basal ganglia | 2.45e-12 | 9 |
cerebral subcortex | 2.45e-12 | 9 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |