FFCP PHASE1:Hg19::chr16:68420586..68420611,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr16:68420586..68420611,- | |||
|id=chr16:68420586..68420611,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.95e-15;1 | |||
|ontology_enrichment_disease=DOID:0050619!1.36e-07!1;DOID:1357!1.36e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.16e-15;1!DOID:1357;1.16e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.16e-15,1;DOID:1357,1.16e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!3.65e-22!35;UBERON:0000160!3.15e-20!27;UBERON:0000059!1.35e-19!11;UBERON:0003127!5.28e-13!2;UBERON:0004921!1.21e-12!129;UBERON:0004185!1.21e-12!129;UBERON:0004907!2.06e-11!5;UBERON:0001155!3.07e-11!9;UBERON:0001007!3.58e-11!155;UBERON:0001555!3.58e-11!155;UBERON:0007026!3.58e-11!155;UBERON:0004119!6.56e-10!169;UBERON:0000925!6.56e-10!169;UBERON:0006595!6.56e-10!169;UBERON:0001764!1.36e-07!1;UBERON:0001825!1.36e-07!1;UBERON:0001154!2.37e-07!1;UBERON:0001153!2.37e-07!1;UBERON:0001052!6.22e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.59e-50;17!UBERON:0005409;4.25e-49;22!UBERON:0004921;1.24e-30;33!UBERON:0002108;1.66e-26;4!UBERON:0000059;4.16e-21;11!UBERON:0001764;1.16e-15;1!UBERON:0001825;1.16e-15;1!UBERON:0001155;5.15e-15;9!UBERON:0001555;3.57e-12;54!UBERON:0003127;2.77e-08;2!UBERON:0001007;4.45e-08;81!UBERON:0000922;2.36e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.90e-50,17;UBERON:0005409,2.15e-43,25;UBERON:0002108,1.66e-26,4;UBERON:0000059,4.16e-21,11;UBERON:0001764,1.16e-15,1;UBERON:0001825,1.16e-15,1;UBERON:0001155,5.15e-15,9;UBERON:0004921,6.33e-11,118;UBERON:0001007,1.31e-10,145;UBERON:0001555,1.31e-10,145;UBERON:0007026,1.31e-10,145;UBERON:0004119,1.66e-09,160;UBERON:0000925,1.66e-09,160;UBERON:0006595,1.66e-09,160;UBERON:0003127,3.08e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95261931078505,21.4067306098081,14.0536933334734,0,0,0,0,0,0,0,0,0,0,19.3585145677862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,11.6220031225173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,6.39211104356647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0.233939463462106,0,0,0,0,0,42.3686128012616,17.4847648403166,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65168194123259,0,0,0,0,0,8.46442944824641,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,1.00411087549747,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:68420586..68420611,- | |||
}} |
Revision as of 12:01, 20 January 2014
Short description: | p@chr16:68420586..68420611, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:68420586..68420611, - |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 6.90e-50 | 17 |
gastrointestinal system | 2.15e-43 | 25 |
small intestine | 1.66e-26 | 4 |
large intestine | 4.16e-21 | 11 |
maxillary sinus | 1.16e-15 | 1 |
paranasal sinus | 1.16e-15 | 1 |
colon | 5.15e-15 | 9 |
subdivision of digestive tract | 6.33e-11 | 118 |
digestive system | 1.31e-10 | 145 |
digestive tract | 1.31e-10 | 145 |
primitive gut | 1.31e-10 | 145 |
endoderm-derived structure | 1.66e-09 | 160 |
endoderm | 1.66e-09 | 160 |
presumptive endoderm | 1.66e-09 | 160 |
open tracheal system trachea | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.16e-15 | 1 |
maxillary sinus cancer | 1.16e-15 | 1 |