FFCP PHASE1:Hg19::chr16:89778278..89778309,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100128881 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=14bp_to_NR_036480,uc002fon.1_5end | |||
|description=CAGE_peak_1_at_LOC100128881_5end | |||
|id=chr16:89778278..89778309,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.11e-22!254;CL:0000012!3.70e-17!682;CL:0000548!1.62e-16!679;CL:0000004!1.62e-16!679;CL:0000255!1.62e-16!679;CL:0002321!3.66e-14!248;CL:0000220!1.15e-13!246;CL:0000003!8.98e-10!722;CL:0000076!1.08e-08!62;CL:0002076!1.61e-08!43;CL:0000144!9.96e-08!625;CL:0000063!5.29e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.32e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.83e-25,253;CL:0002321,1.22e-15,250;CL:0000076,2.22e-09,63;CL:0002076,3.67e-09,42;CL:0000115,2.87e-07,36;CL:0000223,3.41e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.32e-15!235;DOID:14566!6.85e-14!239;DOID:0050686!4.04e-11!137;DOID:2531!9.68e-11!51;DOID:0060083!9.68e-11!51;DOID:1240!1.04e-09!39;DOID:8692!2.22e-09!31;DOID:0050687!2.78e-09!143;DOID:305!3.30e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.06e-09;31!DOID:1240;1.51e-08;39!DOID:1749;6.16e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.29e-17,235;DOID:14566,6.08e-16,239;DOID:0050686,5.48e-12,137;DOID:2531,1.24e-11,51;DOID:0060083,1.24e-11,51;DOID:0050687,1.52e-10,143;DOID:1240,2.43e-10,39;DOID:8692,5.35e-10,31;DOID:305,2.76e-09,106;DOID:1749,6.62e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003104!3.52e-09!238;UBERON:0009142!3.52e-09!238;UBERON:0002100!1.03e-07!216;UBERON:0000487!1.86e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;3.19e-08;33!UBERON:0000487;9.44e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.91e-08,199;UBERON:0000487,1.02e-07,22;UBERON:0005177,5.81e-07,101 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.281908808191942,0,0.446961094427288,0,0,6.31719873426831,0,25.5563293961569,55.1262922698218,1.74753097704138,1.05506791291381,2.47532705920093,2.31978163009541,4.70627602516243,4.82155622419182,3.65155045193687,3.90346239032406,3.32426856807327,4.69201589861782,2.82109249330279,2.57612388417951,8.34933992944594,5.39833350257652,3.82067028739756,4.26923065139718,4.48651453487972,0,0,0.154816123316076,23.9049518364521,27.1085326900425,20.3364705591733,31.6840850373434,29.5712003573837,8.51441274071057,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0.619412741790207,0.28769239232215,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0.306083892370903,0.641858054152187,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,1.81619850790011,0.368277635987565,0.632924774881769,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,1.28019066769952,0,0.574752439954483,0,0,0.569212969109448,1.17447437874188,0.764546456250458,6.60856642895129,3.36305137788922,10.5353633910031,0.196709770113833,1.17903228824749,0,0.668745981562712,0.651844533267181,0.473447805734733,0,0,0,0,0,1.0247305578054,0.520237390239513,0.986627427622057,0.829050053357545,0.289803085735052,0.741432815810302,1.33770414044857,2.09071047609954,0.566546713487831,0.383220493601921,0,0.506039384039006,1.27426165729639,0,0,1.05402583354441,1.02389288923535,3.74792179657038,0.710331756132051,0,0.80642697289893,0.267440195783507,2.02754165435919,0,7.37770945674,6.90457833955064,1.80719576192283,3.00802746381534,3.0417768981773,1.5905718941022,0.973269740605272,2.9305793320861,9.53436409089025,7.90513071238134,0.261958150995425,35.7009382526691,18.168437696437,0,0,0.664789802594326,0.238490624305342,0,0,12.5220316641024,18.0649264972286,15.6213225723417,15.8286223738723,15.5214791397665,26.1362139843064,28.2143204824694,2.06733407335463,3.20189636418039,1.67360306382335,6.8480983908555,10.6438094800592,6.34561349625241,22.427447901098,7.29127753093584,8.75137337183982,6.06229306090659,10.472867684949,13.7984973719295,24.6809071487714,9.52649068438118,0,0,18.3159501899864,0,0.506522046658319,3.97227542439656,2.29469296599051,2.83734705758686,6.16745360156538,22.417289103238,7.89336154934912,9.95875313279252,6.60082293141472,10.6250237023748,4.69208025699287,2.88087962239999,43.5837863210862,15.608003841516,13.6913237170668,12.7031378469031,9.74706338743249,11.1692331614011,11.9383185696911,5.10385428137233,5.65037859634133,6.61284999524899,0,0,43.6877453730253,21.5585442544872,4.04006673489759,10.635074189117,10.2513722729148,2.19488810440419,3.0648779579902,0.300476117813194,6.12533789064114,1.07633781413317,0.85422955527427,1.48352330811693,2.70081986475962,2.57631323096097,1.03056216018252,1.30281799432113,1.85653965465393,0.487185025805993,2.52433774244115,1.38074847963449,1.45481451136931,0.710019185033229,1.30977727695932,2.03472710772585,5.7978255948989,2.45471508531751,11.7589884109492,12.5632917313483,15.2409233569708,9.87648514390906,7.77457912615278,15.3915719034133,13.5041622858057,1.56449532329816,1.28648187638577,5.52539685409922,5.57241513638375,1.44375896333917,5.32380600179297,6.06904884281166,7.47134192638794,5.5146986366197,7.62578054323422,7.35538919244399,3.50561401216427,4.31687223275761,5.77120735419586,7.38155454624648,26.6459370226547,9.4662022606222,7.3504355692771,1.26755034821831,0,6.49868897349544,3.5317047953172,7.01034099695747,7.72055146343365,19.9745519443699,38.2165961075906,14.1745851100399,13.7956783286209,33.5582554469634,24.9584348467099,20.2063878835383,3.82570336417754,2.93521735589554,6.92958949253154,8.33373922637899,4.56609965363036,15.8040879591855,22.3206402144667,0,0,0,2.81201501960331,1.34385702559088,6.238104278665,7.9707085205535,13.0785272331283,16.1020725249389,0,0,0,0,0.25248486685276,1.33345578013555,8.02175693672383,3.51652341630141,5.13217338068116,7.30075198193597,6.9078903304101,6.85983438313388,10.6524530128093,11.7709218584986,9.5339771567235,1.42198887333556,21.4593867511129,10.988935783228,1.06375246633948,2.08014873822732,18.5189309468742,19.858878483259,16.7845972780143,7.29187767656553,5.42621605391443,10.70212437815,13.0294473717494,4.26470338491055,20.5907486962692,1.20575750823834,0,2.59929777073348,0,0,0,1.67737398844108,1.14861935834114,2.85273810081437,0.289562613335158,1.84928690295345,0.537182889719687,0,0.591092280605782,0.215627574859517,0.256686072559497,5.08189248444927,2.60279707715243,0,1.67516265334349,1.27587750330633,0,0,0,5.39842563564216,5.50187573165645,14.6483112797857,2.70362119990049,2.49800584316026,1.26161932027148,0.937131319941706,0.300946099727719,0,2.0694614258501,7.97070718242524,3.31864503375066,2.5196248195744,4.30762546418029,1.71571711905428,1.6541442089831,0,0.533637789017222,0.606255142892519,4.99306318531491,5.14063498660456,0,0.153461973288062,1.12264037773229,0.768834895534206,0.511707249066704,0.482561763430822,0,16.1920178492788,4.08391968220192,9.52675009760186,5.71179872101983,7.08883308605751,27.7976734060731,4.61164881697555,15.9300110859101,6.42960909721798,3.82391452814106,1.57349297951309,10.8287907097779,3.46569016969866,45.4922866122576,17.5367069583913,5.69978796021529,10.2360045663807,14.7981523590569,10.5798798890048,23.1340879035434,16.7986791277189,11.5388647986616,19.625473024468,12.4661401339309,14.7757338116638,2.19259876645935,1.8300481571743,7.1806035032589,16.0727176392856,17.2450549172081,0.103041011647722,11.1714747078379,8.2509499920588,37.3272599697512,33.8031327938991,4.82051789532479,14.0172541523577,15.8670075628084,14.4293454242562,11.440435516216,6.98231591643779,7.54086808353988,14.2328467784889,6.76643470915204,6.94196644516108,9.60950336825531,13.2717220994367,11.7343025792438,3.71876439437829,5.66662224295152,11.1525963225696,8.00887308457831,3.19383618190213,10.4391959049009,4.81842969670192,0.143124886741991,1.86079184679834,0.949138274156178,2.09693213316207,29.4282460008034,4.70732886837312,2.86382923133343,7.8494864019923,1.43897966066652,4.66712950551293,7.7756185548153,3.03273722359974,3.17020642346017,8.42516912477962,31.6961930408234,5.11798328225697,1.05650146756755,3.27599787379166,10.8882182604359,0,0.551365343546124,2.65375590096488,5.26141062304515,12.7330617538671,0.655894752046633,6.49313206280653,8.675057946793,10.1410416911607,5.44963138375396,5.20719917369542,6.4200789266625,2.48332744849418,0.633322905892992,0,22.0094440784115,23.7955609766588,17.1275360651411,16.7575568883947,30.4894757611703,0,11.6236450621232,10.1082885400575,3.99087138183008,2.52695740227655,1.01489521846434,0.764637207142375,1.13929437434833,0.952927101831156,0.822724546172388,0.648473311192717,0,0,0.106824071127473,0,7.35120647943095,21.1815619643319,18.1779208350321,0.213425530045242,18.9717264547299,24.7478420576693,4.78763425330917,8.89029047440308,21.1004261178461,10.9510899464249,18.2587743226554,0,17.5444133963047,12.358299779517,17.8252763365106,19.9781710119137,8.94277099149685,5.15258017133647,11.6751490437214,11.1838053946208,9.34355193586688,24.8142881160591,27.2838050417337,13.5396138842484,20.0137202072228,0,11.278960407028,14.7841026922494,0,6.55346817447373,5.46072582959644,12.5019904594822,0,0,0,0,0.281338832821026,0.111308705022906,32.6311670968984,21.3236662209273,0.398495976502139,2.21027132424918,18.8949560890707,0,11.3238021024184,0,17.3445917714341,4.29650819221462,12.7893092556718,0.295930216910801,2.3948309234694,1.11136990144637,0,0,0,8.5941161158127,12.506779999456,0,32.0897524165109,28.2221551824971,22.220442086186,8.96332770427808,10.7893706951804,9.37574972639778,2.65722415744152,0.723578631752448,0,0,0,0,21.896631167317,9.89908584378083,0.538651809526579,0,11.528195219403,4.21860928725929,22.1640638720896,0.31900115973192,1.00757352742049,0,12.2631957834884,10.0467364092816,12.1334527787114,31.5833924864053,35.2912561771931,40.9484672221056,34.3454256230775,32.2641255330169,3.58696709697646,0,9.47065578607404,38.5171778740922,1.99052386215701,0.619202951523374,0,7.70954934569617,19.893794170387,21.6153435476293,0.337005664903385,0,0,8.0280107254893,33.4586498373873,30.3475474417616,0.394584402849391,0,0.30607276163049,3.53844845919533,32.1692117547014,41.7863411330906,27.9154626537018,31.4442358081724,34.2186881063876,28.6733831455101,26.4686877807707,13.035419263235,19.4386906935347,10.6811713181672,48.9272740981862,1.22308667769421,0.51595809741485,10.6431964417994,11.4019334654449,11.00347124513,1.93978032976839,109.261084844077,0.677942222341597,0,0,0,4.30213042016567,8.33651730615951,0.85381197895741,0,32.2762534425197,26.2288805219947,19.561829756264,10.5160002531349,24.8505071130865,3.53541051925193,0,0,0.713987523454252,3.17845648891671,0,0.136905378891993,40.8789081814311,1.71906176567983,13.407255068245,0,0,0.717873024576814,2.79550600698588,0,0.446342914883745,0.268733889946905,1.08089965062721,0,0.0787831823072236,0,0,6.10250385391442,26.5874262686563,0,0,5.94786649320571,6.18927464687552,6.64704540846696,0,2.32140586367385,0,3.68978156359193,0.157611414598396,2.8850023474249,32.9473049940548,15.7772858612903,18.8076893373056,0.714695326373367,0,53.1421243698427,0,0,0,0,28.814474783018,0.170388021785422,5.09904411840566,0.732761168390412,1.32506888912221,0.129282956361551,0,8.89651556998513,7.75296524548339,0,0.628817220398664,0.414239055347196,2.97699613087171,14.4256491285499,15.4676599943738,48.5139355905338,0,0,0,0,9.89440806376476,0,0,0,0.573409195690071,0,0.124192805882767,18.6770657163912,0.124980407962107,18.6528414576227,33.9703746918511,9.41063278792687,9.36669811613763,4.20270982971393,4.6268988894931,5.14169281663894,1.66441758450784,0.568209015825267,1.76097531226803,1.77962244319307,0.228840068396924,2.87338755150154,1.86524640699337,2.06997209985487,3.66382564476516,1.79921244865442,1.86315548251511,0.414706207840855,0.265841714557995,2.08698024724694,0.300515217994437,1.52322084867518,8.13741466409323,1.09109195521536,0.859284456339908,0,1.59238355479446,0,1.03018711554838,1.01024846629776,0,3.65977677773876,0,0,0,0.694567422971502,32.5499816993602,6.62628712001503,6.48483039038042,0,1.59020231351293,10.4173580666294,3.88567613502067,0,0,0,0,0,0,0,0,2.45772908753719,4.86017883724842,4.39972270880846,13.7632331305442,11.8828335965963,0,0.368211900503681,13.5683122487861,6.8428498603627,37.089367678059,6.14601424961086,28.4651354759172,14.3064626031538,55.8420023548743,56.1197789068443,38.4200869202907,25.6976662267692,7.63210441568205,2.83902282004512,0.80057074828547,0.352675943690684,0.918736432059601,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,28.3646906467964,13.2126090149469,2.38457178078183,37.8924184973109,0,21.4011577078631,28.0471873183947,1.42899623863589,0.20170506870352,2.34454203369928,4.19050711170276,0,1.47856086217045,0,0,0,0,1.09394961803644,0,0.992422356778588,11.7833733720946,14.6926791785535,0,0.672567444437648,0,0.227662191351298,0.620916591138472,14.634716419584,0,0.0679697329768317,0.0657727735628491,25.884451153589,22.468743182198,1.88383422841234,3.61365856806804,0,0.913158720509496,0,0,0.357382720883282,0,23.8294922004657,20.689134404007,1.60342272946051,15.3339961480647,3.92652497316085,1.38251932362818,0,3.0766320189947,5.53887130934525,1.27016115057279,5.4985648450572,0,0,0,7.95016892283468,17.5561811974468,0,0.102662806856247,1.1598144313382,0.971421986118279,4.2109103423179,21.4866837174278,0,23.2668929000258,10.3344085740703,2.71733118420012,0.617393264863557,3.93407208907123,0.940634592723046,0,0,0,0.297046400327086,1.2679671827502,1.0195626881269,1.69171052363736,3.60964172652032,4.89711664032152,16.2484084131148,18.7034282009317,15.8075492377661,1.46067277649303,1.37618785021362,0,0,0.0679914901909147,0.872701380680755,2.645134202577,0.371995018166751,0,0.432626562123789,0,10.8172916244059,0.126698501011437,7.75115106039061,16.5674791264648,5.14611437395132,4.51273570726275,0.227336094654718,1.07185652062471,0.829169439458779,0,1.91910583710883,0.23806443146374,2.45437857376823,1.73809200028402,0,0.12729431655633,1.0105859447911,3.9189014621453,0.342233301085281,4.17582728690443,2.7254438049217,2.99394320891412,3.09332420721703,17.9301941074562,1.9307228228694,12.2162274864958,0,1.34465588601153,2.84827324821017,1.33151354837103,2.41528552309231,5.77023286145819 | |||
|short_description=p1@LOC100128881 | |||
}} |
Revision as of 12:50, 20 January 2014
Short description: | p1@LOC100128881 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100128881_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_NR_036480, uc002fon.1_5end |
EntrezGene: | LOC100128881 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.83e-25 | 253 |
embryonic cell | 1.22e-15 | 250 |
squamous epithelial cell | 2.22e-09 | 63 |
endo-epithelial cell | 3.67e-09 | 42 |
endothelial cell | 2.87e-07 | 36 |
endodermal cell | 3.41e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk | 3.91e-08 | 199 |
simple squamous epithelium | 1.02e-07 | 22 |
trunk region element | 5.81e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.29e-17 | 235 |
disease of cellular proliferation | 6.08e-16 | 239 |
organ system cancer | 5.48e-12 | 137 |
hematologic cancer | 1.24e-11 | 51 |
immune system cancer | 1.24e-11 | 51 |
cell type cancer | 1.52e-10 | 143 |
leukemia | 2.43e-10 | 39 |
myeloid leukemia | 5.35e-10 | 31 |
carcinoma | 2.76e-09 | 106 |
squamous cell carcinoma | 6.62e-07 | 14 |