FFCP PHASE1:Hg19::chr17:27438858..27438867,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr17:27438858..27438867,- | |||
|id=chr17:27438858..27438867,- | |||
|ontology_enrichment_celltype=CL:0002319!1.20e-13!25;CL:0002605!4.50e-09!3;CL:0000243!6.76e-09!15;CL:0000125!6.76e-09!15;CL:0000030!6.76e-09!15;CL:0000339!6.76e-09!15;CL:0000133!1.64e-08!59;CL:0000128!2.02e-08!7;CL:0000126!2.02e-08!7;CL:0000127!2.02e-08!7;CL:0002453!2.02e-08!7;CL:0000095!6.21e-08!17;CL:0000123!6.21e-08!17;CL:0000047!9.39e-08!8;CL:0000221!7.91e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.14e-26;2!CL:0000333;3.26e-11;5!CL:0002319;2.06e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.06e-08,25;CL:0000133,3.25e-08,59;CL:0000047,1.69e-07,8;CL:0000221,6.51e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!4.09e-07!1;DOID:4549!4.09e-07!1;DOID:5861!4.09e-07!1;DOID:6496!4.09e-07!1;DOID:5409!4.63e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:169;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001871!2.14e-12!7;UBERON:0000073!3.15e-11!94;UBERON:0001016!3.15e-11!94;UBERON:0001017!8.92e-10!82;UBERON:0005743!3.23e-09!86;UBERON:0001869!4.09e-08!32;UBERON:0000956!6.58e-08!25;UBERON:0000203!6.58e-08!25;UBERON:0002791!7.51e-08!33;UBERON:0002020!1.33e-07!34;UBERON:0003528!1.33e-07!34;UBERON:0001893!1.33e-07!34;UBERON:0001882!4.90e-07!1;UBERON:0005403!4.90e-07!1;UBERON:0000955!8.05e-07!69;UBERON:0006238!8.05e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;3.26e-11;5!UBERON:0002410;3.26e-11;5!UBERON:0001871;2.18e-08;6!UBERON:0001016;8.45e-08;83!UBERON:0000010;8.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.94e-11,5;UBERON:0002410,2.94e-11,5;UBERON:0001016,1.88e-09,89;UBERON:0001871,2.35e-08,6;UBERON:0000010,7.91e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,3.87376177821446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,1.72992536041486,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.603851374266694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:27438858..27438867,- | |||
}} |
Revision as of 14:28, 20 January 2014
Short description: | p@chr17:27438858..27438867, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:27438858..27438867, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.06e-08 | 25 |
neurectodermal cell | 3.25e-08 | 59 |
neuronal stem cell | 1.69e-07 | 8 |
ectodermal cell | 6.51e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.94e-11 | 5 |
autonomic nervous system | 2.94e-11 | 5 |
nervous system | 1.88e-09 | 89 |
temporal lobe | 2.35e-08 | 6 |
peripheral nervous system | 7.91e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.32e-09 | 6 |